Miyakogusa Predicted Gene
- Lj6g3v2218350.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v2218350.1 Non Characterized Hit- tr|I1K2P5|I1K2P5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.42347
PE,34.77,0.00000000000004,PUF,Pumilio RNA-binding repeat; PUM,Pumilio
RNA-binding repeat; PUM_HD,Pumilio RNA-binding repeat; A,CUFF.60847.1
(767 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g008770.1 | pumilio-family RNA-binding repeatprotein | LC ... 770 0.0
Medtr5g063650.1 | pumilio-family RNA-binding repeatprotein | LC ... 408 e-113
Medtr5g062070.1 | pumilio-family RNA-binding repeatprotein | LC ... 281 2e-75
Medtr3g102650.1 | pumilio-family RNA-binding repeatprotein | LC ... 248 2e-65
Medtr2g097670.2 | pumilio Mpt5 protein, putative | HC | chr2:417... 191 2e-48
Medtr2g097670.1 | pumilio Mpt5 protein, putative | HC | chr2:417... 191 2e-48
Medtr1g100230.1 | pumilio-like protein | LC | chr1:45172367-4517... 191 2e-48
Medtr4g064670.1 | pumilio Mpt5 protein, putative | HC | chr4:241... 189 8e-48
Medtr4g064670.2 | pumilio Mpt5 protein, putative | HC | chr4:241... 189 1e-47
Medtr2g036900.2 | pumilio-family RNA-binding repeatprotein | HC ... 188 2e-47
Medtr2g036900.1 | pumilio-family RNA-binding repeatprotein | HC ... 188 2e-47
Medtr5g080390.1 | pumilio-family RNA-binding repeatprotein | HC ... 187 3e-47
Medtr1g106975.1 | pumilio-family RNA-binding repeatprotein | LC ... 186 7e-47
Medtr1g094630.1 | pumilio-family RNA-binding repeatprotein | HC ... 183 5e-46
Medtr2g036900.3 | pumilio-family RNA-binding repeatprotein | HC ... 177 3e-44
Medtr2g006930.1 | pumilio-family RNA-binding repeatprotein | LC ... 173 6e-43
Medtr2g097670.3 | pumilio Mpt5 protein, putative | HC | chr2:417... 141 2e-33
Medtr2g006940.1 | pumilio-like protein | LC | chr2:736512-738484... 137 6e-32
Medtr1g094630.3 | pumilio-family RNA-binding repeatprotein | HC ... 135 2e-31
Medtr4g029480.1 | pumilio-family RNA-binding repeatprotein | LC ... 68 4e-11
Medtr1g094630.2 | pumilio-family RNA-binding repeatprotein | HC ... 67 5e-11
Medtr1g051630.1 | pumilio-family RNA-binding repeatprotein | LC ... 65 2e-10
Medtr5g063660.1 | hypothetical protein | LC | chr5:26386295-2638... 59 3e-08
>Medtr2g008770.1 | pumilio-family RNA-binding repeatprotein | LC |
chr2:1611979-1606856 | 20130731
Length = 745
Score = 770 bits (1988), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/800 (56%), Positives = 528/800 (66%), Gaps = 92/800 (11%)
Query: 1 MMENVKDEG-DLEMLLGEIP-----HNLLHLYDHRQFLPKQPVNGGG-----VFYDDDPL 49
++ENVKD+G + EMLL EIP HNL+H DH L KQ +G G +YD++ L
Sbjct: 5 VIENVKDDGKEFEMLLNEIPHASSSHNLVH--DH---LMKQENHGFGNGVMNFYYDEENL 59
Query: 50 TQIKFXXXXXXXXX----XXXXXXXXXXXXXXXTGSPTPPP-LEDFKSTTGIS------- 97
Q+ F GSPT P +ED KST
Sbjct: 60 NQMNFSRSSSTVTTGSGFSIQSDHGSSSSLFSDNGSPTTPSFMEDLKSTMSSGTGTGTGT 119
Query: 98 ----SHHGNSFWLDSTVTVREKAGESLVDELGLCANLSKMCIXXXXXXXXXXXXVFPSFC 153
S + N+FWLDS K VD LC N SKM I +
Sbjct: 120 SYGCSPNNNTFWLDSKDNTESK---RFVD---LCGNFSKMHIGGSNGNQHQENA--SNVN 171
Query: 154 DSSLSGNNLINVHVHNKQHRDLDYNSFRRGAFDS--LGFQSPFPRSP-NSLGAGMNPALS 210
D + N INV N + +D++ ++RG DS +GFQS RSP N GA N ALS
Sbjct: 172 DFTFL--NPINVDNFNNHDKYVDFDGYKRGFLDSDYVGFQSSMLRSPINHHGAERNSALS 229
Query: 211 GLTQDFEMANLFGSSQPCPARYEYDAVLSQLNGFSGGSMDSPRHRRQMMNQNNHYCRGNL 270
+D+E+AN FGS D SQLNGF GGSMDSP HRR+MM N++YCRG+L
Sbjct: 230 ---RDYEVANSFGSVGLVRGLRLRDITYSQLNGF-GGSMDSPYHRREMM--NDYYCRGSL 283
Query: 271 APEFVPP-LSRNPIVDDASIYDQRNGVNLMGERGASVFAQRNGVNLMGERGVPRLPNYSH 329
PE V P L RN V DAS+ G++ + E + RLP S
Sbjct: 284 TPEIVTPSLRRNSAVSDASL----------------------GMDFLHEVSMSRLPFDSL 321
Query: 330 CTNFRPHMSVHDLLQHGPPLSNARVVPPCNARMIPQANI--DSISSEGSFIIQGEGLSYV 387
N R N R VPP NAR IPQ NI DS++SEGSFI+QGEGL YV
Sbjct: 322 RGNSRI---------------NPRAVPPSNAR-IPQENIDMDSVTSEGSFILQGEGLIYV 365
Query: 388 VNRGSDRSRCSNAARQNGFAKHLQRPELDIQHQAFGAYENPRSPRIDSPFPSLPKYNSLA 447
RGSDR R NAAR+ GFAK+ RPELDIQ Q GA ENPRS R SPF PKYNSL
Sbjct: 366 GARGSDRLRFQNAAREFGFAKYPHRPELDIQQQVVGACENPRSSRTGSPFTMQPKYNSLM 425
Query: 448 EARGCVYLIAKDQHGCRFLQRVFEEGTPEDVQVIFNEIIEHVVELMINPFGNYLMQKLLE 507
EARGC+YL+AKDQ+G RFLQR+F+EG ED+Q+IFNEII HVVELM++PFGNYL++KLL+
Sbjct: 426 EARGCIYLMAKDQNGGRFLQRMFDEGRMEDIQMIFNEIIGHVVELMMSPFGNYLIRKLLD 485
Query: 508 VCNEEQRLQIILMVTQEPGQLVRISLNTHGTRVVQKLIETLKTRQQISLVVSALEPGFLA 567
VC+EEQR+QIILMV QEPGQLVRISLNTHGTRVVQKLIETLKT+QQ+SLVVSALEPGFL
Sbjct: 486 VCSEEQRMQIILMVIQEPGQLVRISLNTHGTRVVQKLIETLKTKQQVSLVVSALEPGFLI 545
Query: 568 LIKDLNGNHVVQHCLQCLSNGDNKFIFVAAAKYCAEIATHQHGCCVLQKCIGHSSGEHRE 627
LIKD NGNHVVQHCL+ L NGDNKFIFVAAA++C +IATHQHGCCVL KCI +SSGEHR+
Sbjct: 546 LIKDNNGNHVVQHCLEYLRNGDNKFIFVAAARHCIDIATHQHGCCVLPKCIRYSSGEHRQ 605
Query: 628 KLVGEISANALLLAQDQYGNYVVQFILDLRIPSATSTIVLLFEGNYVHLAMQKFSSHVVE 687
+LV EISANALLLAQD+YGNYVVQ++LD RIPSA +T+ FEGNYVH++MQKFSS VVE
Sbjct: 606 RLVAEISANALLLAQDKYGNYVVQYVLDFRIPSAATTLTRQFEGNYVHMSMQKFSSRVVE 665
Query: 688 KCLSVLDDESRSRIIYELLSAPHFAQLLQDPHANYVVQSALKHSEGDVHNSLVEAIESHK 747
KCL V +DE+R++II+ELLS PHF LLQDPHANYV+Q AL+HSEG V+N LVE IES+K
Sbjct: 666 KCLVVFNDENRAKIIHELLSDPHFDLLLQDPHANYVIQKALRHSEGHVYNLLVEKIESYK 725
Query: 748 AISRNSPYSKKIFSQKLLKK 767
AI RNSPYSKKIFS KLLKK
Sbjct: 726 AICRNSPYSKKIFSHKLLKK 745
>Medtr5g063650.1 | pumilio-family RNA-binding repeatprotein | LC |
chr5:26380049-26384328 | 20130731
Length = 712
Score = 408 bits (1049), Expect = e-113, Method: Compositional matrix adjust.
Identities = 198/322 (61%), Positives = 257/322 (79%), Gaps = 2/322 (0%)
Query: 446 LAEARGCVYLIAKDQHGCRFLQRVFEEGTPEDVQVIFNEIIEHVVELMINPFGNYLMQKL 505
L E + ++ +AKDQ+G RFLQ + E+GT ED++++FN +I++VVELM++PFGNYL+QKL
Sbjct: 393 LPELQSYMFHMAKDQNGGRFLQGMVEKGTVEDMEMVFNGVIDNVVELMMDPFGNYLVQKL 452
Query: 506 LEVCNEEQRLQIILMVTQEPGQLVRISLNTHGTRVVQKLIETLKTRQQISLVVSALEPGF 565
LE C ++QRLQI+LM+T+ PGQLVR S NTHGTR VQKLI TLK+R+QI+LV SA+ PGF
Sbjct: 453 LEFCRDDQRLQIVLMLTKVPGQLVRTSFNTHGTRSVQKLISTLKSRRQIALVRSAILPGF 512
Query: 566 LALIKDLNGNHVVQHCLQCLSNGDNKFIFVAAAKYCAEIATHQHGCCVLQKCIGHSSGEH 625
L L+KDLNGNHV+Q CL C S DN+FIF AA K+ ++ATHQHGCCVLQ+CI S G+
Sbjct: 513 LDLVKDLNGNHVIQRCLSCWSVQDNEFIFDAATKFLTDVATHQHGCCVLQRCIDFSKGKS 572
Query: 626 REKLVGEISANALLLAQDQYGNYVVQFILDLRIPSATSTIVLLFEGNYVHLAMQKFSSHV 685
EKLV EI + LAQD YGNYV+Q+I++L+IPSA + + F+GNYV L+ QKFSSHV
Sbjct: 573 LEKLVKEICKHGFSLAQDPYGNYVIQYIIELQIPSAMAKLTPQFKGNYVILSTQKFSSHV 632
Query: 686 VEKCLSVLDDESRSRIIYELLSAPHFAQLLQDPHANYVVQSALKHSEGDVHNSLVEAIES 745
VEKCL + E+R+RI+ ELLS PHF +LLQDP+ANYVVQ AL++++G +H SLVEA+ +
Sbjct: 633 VEKCL-IYIVETRARIVQELLSVPHFERLLQDPYANYVVQKALEYTKGSLHASLVEAVRA 691
Query: 746 HKAISRNSPYSKKIFSQKLLKK 767
HK I R SPY K+IFS+ L KK
Sbjct: 692 HK-ILRTSPYCKRIFSKTLPKK 712
>Medtr5g062070.1 | pumilio-family RNA-binding repeatprotein | LC |
chr5:25781137-25777781 | 20130731
Length = 349
Score = 281 bits (718), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 140/286 (48%), Positives = 201/286 (70%), Gaps = 2/286 (0%)
Query: 472 EGTPEDVQVIFNEIIEHVVELMINPFGNYLMQKLLEVCNEEQRLQIILMVTQEPGQLVRI 531
+ T D+ +FNE+I VV+ ++PF + ++Q +LE ++QRL+I+ +TQ P QLV
Sbjct: 12 DWTLIDIDTMFNEVIGDVVKQTLDPFMSNIVQHVLEFGRDDQRLKIVRKLTQHPDQLVEA 71
Query: 532 SLNTHGTRVVQKLIETLKTRQQISLVVSALEPGFLALIKDLNGNHVVQHCLQCLSNGDNK 591
SL+++GT+ VQKLI T ++++I+LV +L GFL L+ DL+GN V+Q CL C S DN+
Sbjct: 72 SLDSYGTKCVQKLISTHNSKKEIALVSYSLLSGFLYLVMDLDGNQVLQRCLSCWSVEDNE 131
Query: 592 FIFVAAAKYCAEIATHQHGCCVLQKCIGHSSGEHREKLVGEISANALLLAQDQYGNYVVQ 651
FI+ AA ++C +AT +HGCC+LQ+CI S+G ++KLV EI A LAQ +YGN++VQ
Sbjct: 132 FIYDAATRFCYAVATDEHGCCLLQRCIEFSNGNSQQKLVKEICKYAFHLAQHEYGNHIVQ 191
Query: 652 FILDLRIPSATSTIVLLFEGNYVHLAMQKFSSHVVEKCLSVLDDESRSRIIYELLSAPHF 711
+I+ ++ PSA + + F G YV L+MQKFS HVVEKCL + E+R+RI+ E L+ P+F
Sbjct: 192 YIIQMQNPSAIAELTAQFNGKYVQLSMQKFSIHVVEKCLEHI-VETRARIVQEFLAVPYF 250
Query: 712 AQLLQDPHANYVVQSALKHSEGDVHNSLVEAIESHKAISRNSPYSK 757
LLQDP+ANYVVQ ALK +EG +H SLVE + SHK I PY +
Sbjct: 251 ENLLQDPYANYVVQCALKFTEGSLHESLVETVRSHK-ILHTGPYCR 295
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 72/138 (52%), Gaps = 6/138 (4%)
Query: 447 AEARGCVYLIAKDQHGCRFLQRVFEEGTPEDVQVIFNEIIEHVVELMINPFGNYLMQKLL 506
A R C Y +A D+HGC LQR E Q + EI ++ L + +GN+++Q ++
Sbjct: 136 AATRFC-YAVATDEHGCCLLQRCIEFSNGNSQQKLVKEICKYAFHLAQHEYGNHIVQYII 194
Query: 507 EVCNEEQRLQIILMVTQEPGQLVRISLNTHGTRVVQKLIE-TLKTRQQISLVVSALEPGF 565
++ N I + Q G+ V++S+ VV+K +E ++TR +I A+ P F
Sbjct: 195 QMQNPS---AIAELTAQFNGKYVQLSMQKFSIHVVEKCLEHIVETRARIVQEFLAV-PYF 250
Query: 566 LALIKDLNGNHVVQHCLQ 583
L++D N+VVQ L+
Sbjct: 251 ENLLQDPYANYVVQCALK 268
>Medtr3g102650.1 | pumilio-family RNA-binding repeatprotein | LC |
chr3:47305805-47309075 | 20130731
Length = 554
Score = 248 bits (633), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 126/317 (39%), Positives = 199/317 (62%), Gaps = 2/317 (0%)
Query: 448 EARGCVYLIAKDQHGCRFLQRVFEEGTPEDVQVIFNEIIEHVVELMINPFGNYLMQKLLE 507
E RG VY +AKD HG + LQ V E PE V F E+I H+ ELM++P G ++ K++E
Sbjct: 211 EFRGRVYSLAKDTHGSKILQEVMENLGPEGVSYFFLELINHMCELMVDPIGYEVITKMVE 270
Query: 508 VCNEEQRLQIILMVTQEPGQLVRISLNTHGTRVVQKLIETLKTRQQISLVVSALEPGFLA 567
VCN++Q+ QI+L+VT Q +RI L+ HG+R V+KL+E + TR+Q L++SAL PG +
Sbjct: 271 VCNQDQKTQIVLLVTHHGAQFIRICLSLHGSRSVEKLLEKVTTREQRGLIMSALTPGAIV 330
Query: 568 LIKDLNGNHVVQHCLQCLSNGDNKFIFVAAAKYCAEIATHQHGCCVLQKCIGHSSGEHRE 627
L KD+NG+ VV +CL+ + D + A+ ++ + GCCVLQ C+ H+ G +
Sbjct: 331 LSKDINGHRVVFNCLKNFPHADTEKFLGVIARNSLSLSRDKTGCCVLQYCVSHAQGATKN 390
Query: 628 KLVGEISANALLLAQDQYGNYVVQFILDLRIPSATSTIVLLFEGNYVHLAMQKFSSHVVE 687
L+ EI +A LLA+D YGNYV+Q ++ L+IP+ + + + +V L+ K+ S+VVE
Sbjct: 391 LLIHEIILHAPLLAEDCYGNYVIQHLISLKIPTVSGNLHHQLQQQFVSLSCNKYGSNVVE 450
Query: 688 KCLSVLDDESRSRIIYELLSAPHFAQLLQDPHANYVVQSALKHSEGD--VHNSLVEAIES 745
K L + S II ELL+ P+ +LL DP+ N+V+ +AL +G + N+L E +E+
Sbjct: 451 KFLHDSGVDISSCIIIELLNDPNVTRLLTDPYGNFVISTALNKFKGARFIKNALEELVEA 510
Query: 746 HKAISRNSPYSKKIFSQ 762
+ + R++ + KK+ +
Sbjct: 511 NSQMMRSNMFGKKVLDK 527
>Medtr2g097670.2 | pumilio Mpt5 protein, putative | HC |
chr2:41717566-41723738 | 20130731
Length = 1047
Score = 191 bits (485), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 108/322 (33%), Positives = 174/322 (54%), Gaps = 9/322 (2%)
Query: 446 LAEARGCVYLIAKDQHGCRFLQRVFEEGTPEDVQVIFNEIIEHVVELMINPFGNYLMQKL 505
L+E G V + DQ+G RF+Q+ E T E+ +++ EI H + LM + FGNY++QK
Sbjct: 710 LSEISGHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEITPHALALMTDVFGNYVVQKF 769
Query: 506 LEVCNEEQRLQIILMVTQEPGQLVRISLNTHGTRVVQKLIETLKTRQQISLVVSALEPGF 565
E QR + + + G ++ +SL +G RV+QK IE + Q+I +V L+
Sbjct: 770 FEHGLASQRRE---LANKLYGHVLTLSLQMYGCRVIQKAIEVVDLDQKIKMV-QELDGNI 825
Query: 566 LALIKDLNGNHVVQHCLQCLSNGDNKFIFVAAAKYCAEIATHQHGCCVLQKCIGHSSG-E 624
+ ++D NGNHV+Q C++C+ FI ++TH +GC V+Q+ + H +
Sbjct: 826 MRCVRDQNGNHVIQKCIECVPEDAIDFIISTFFDQVVTLSTHPYGCRVIQRVLEHCENPD 885
Query: 625 HREKLVGEISANALLLAQDQYGNYVVQFILDLRIPSATSTIVLLFEGNYVHLAMQKFSSH 684
++K++ EI +LAQDQYGNYVVQ +L+ P STI+ GN V ++ QKF+S+
Sbjct: 886 TQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSTIIKELAGNIVQMSQQKFASN 945
Query: 685 VVEKCLSVLDDESRSRIIYELLSAPH----FAQLLQDPHANYVVQSALKHSEGDVHNSLV 740
VVEKCL+ R ++ E+L +++D ANYVVQ L+ + ++
Sbjct: 946 VVEKCLTFGGPSERLLLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQRELIL 1005
Query: 741 EAIESHKAISRNSPYSKKIFSQ 762
I+ H + Y K I ++
Sbjct: 1006 SRIKVHLNALKKYTYGKHIVAR 1027
>Medtr2g097670.1 | pumilio Mpt5 protein, putative | HC |
chr2:41717566-41723738 | 20130731
Length = 1047
Score = 191 bits (485), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 108/322 (33%), Positives = 174/322 (54%), Gaps = 9/322 (2%)
Query: 446 LAEARGCVYLIAKDQHGCRFLQRVFEEGTPEDVQVIFNEIIEHVVELMINPFGNYLMQKL 505
L+E G V + DQ+G RF+Q+ E T E+ +++ EI H + LM + FGNY++QK
Sbjct: 710 LSEISGHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEITPHALALMTDVFGNYVVQKF 769
Query: 506 LEVCNEEQRLQIILMVTQEPGQLVRISLNTHGTRVVQKLIETLKTRQQISLVVSALEPGF 565
E QR + + + G ++ +SL +G RV+QK IE + Q+I +V L+
Sbjct: 770 FEHGLASQRRE---LANKLYGHVLTLSLQMYGCRVIQKAIEVVDLDQKIKMV-QELDGNI 825
Query: 566 LALIKDLNGNHVVQHCLQCLSNGDNKFIFVAAAKYCAEIATHQHGCCVLQKCIGHSSG-E 624
+ ++D NGNHV+Q C++C+ FI ++TH +GC V+Q+ + H +
Sbjct: 826 MRCVRDQNGNHVIQKCIECVPEDAIDFIISTFFDQVVTLSTHPYGCRVIQRVLEHCENPD 885
Query: 625 HREKLVGEISANALLLAQDQYGNYVVQFILDLRIPSATSTIVLLFEGNYVHLAMQKFSSH 684
++K++ EI +LAQDQYGNYVVQ +L+ P STI+ GN V ++ QKF+S+
Sbjct: 886 TQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSTIIKELAGNIVQMSQQKFASN 945
Query: 685 VVEKCLSVLDDESRSRIIYELLSAPH----FAQLLQDPHANYVVQSALKHSEGDVHNSLV 740
VVEKCL+ R ++ E+L +++D ANYVVQ L+ + ++
Sbjct: 946 VVEKCLTFGGPSERLLLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQRELIL 1005
Query: 741 EAIESHKAISRNSPYSKKIFSQ 762
I+ H + Y K I ++
Sbjct: 1006 SRIKVHLNALKKYTYGKHIVAR 1027
>Medtr1g100230.1 | pumilio-like protein | LC |
chr1:45172367-45174672 | 20130731
Length = 416
Score = 191 bits (485), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 102/322 (31%), Positives = 181/322 (56%), Gaps = 5/322 (1%)
Query: 450 RGCVYLIAKDQHGCRFLQRVFEEGTPEDVQVIFNEIIEHVVELMINPFGNYLMQKLLEV- 508
R V +A D GC++LQ E+G P DV+ I + + +HV +LM + NYL++K+ +
Sbjct: 91 RELVLSMAMDWRGCQYLQAKIEKGNPADVEFILSIVKDHVHQLMTHN-NNYLIKKIFQAR 149
Query: 509 --CNEEQRLQIILMVTQEPGQLVRISLNTHGTRVVQKLIETLK-TRQQISLVVSALEPGF 565
EQ I+L + + +L + ++ GTRV+Q +++ +K + ++VV +
Sbjct: 150 SGVTPEQMESIVLSIISDDQKLKHVCMDNRGTRVMQNMLKNIKLSFTTYNVVVCTMHRIT 209
Query: 566 LALIKDLNGNHVVQHCLQCLSNGDNKFIFVAAAKYCAEIATHQHGCCVLQKCIGHSSGEH 625
LAL+K NG +V+ CL+ + + I A+ C +I T + GC ++QKC+ G
Sbjct: 210 LALVKSFNGGYVILQCLKFFQSEHKRVILDQVARNCVDITTDKIGCSIIQKCLSLVEGSV 269
Query: 626 REKLVGEISANALLLAQDQYGNYVVQFILDLRIPSATSTIVLLFEGNYVHLAMQKFSSHV 685
+ LV EI +NA++LA+D YGNYV+QF++ + + ++ G + +M K SS+V
Sbjct: 270 KSLLVTEIISNAMILAEDPYGNYVLQFVITMESSATREKMIKQLRGKFARFSMSKHSSNV 329
Query: 686 VEKCLSVLDDESRSRIIYELLSAPHFAQLLQDPHANYVVQSALKHSEGDVHNSLVEAIES 745
VE L ++ + I+ E++ + F ++QDP NYV Q ALK ++G +H L + I S
Sbjct: 330 VEDLLRFSNENDVAVIVEEIMKSCDFLNVVQDPFGNYVAQRALKCTKGRLHRELAKLITS 389
Query: 746 HKAISRNSPYSKKIFSQKLLKK 767
+K I ++ Y K++ + + ++
Sbjct: 390 NKRILQSHLYGKRVLTMAMTER 411
>Medtr4g064670.1 | pumilio Mpt5 protein, putative | HC |
chr4:24134583-24140955 | 20130731
Length = 1025
Score = 189 bits (480), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 108/322 (33%), Positives = 174/322 (54%), Gaps = 9/322 (2%)
Query: 446 LAEARGCVYLIAKDQHGCRFLQRVFEEGTPEDVQVIFNEIIEHVVELMINPFGNYLMQKL 505
L+E G V + DQ+G RF+Q+ E T E+ +++ EI+ H + LM + FGNY++QK
Sbjct: 688 LSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEIMPHALALMTDVFGNYVVQKF 747
Query: 506 LEVCNEEQRLQIILMVTQEPGQLVRISLNTHGTRVVQKLIETLKTRQQISLVVSALEPGF 565
E QR ++ + G ++ +SL +G RV+QK IE + Q+I +V L+
Sbjct: 748 FEHGLAPQRRELANKLI---GHVLTLSLQMYGCRVIQKAIEVVDLDQKIEMV-KELDGNI 803
Query: 566 LALIKDLNGNHVVQHCLQCLSNGDNKFIFVAAAKYCAEIATHQHGCCVLQKCIGH-SSGE 624
+ ++D NGNHV+Q C++C+ FI ++TH +GC V+Q+ + H S
Sbjct: 804 MRCVRDQNGNHVIQKCIECVPEEAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCESPA 863
Query: 625 HREKLVGEISANALLLAQDQYGNYVVQFILDLRIPSATSTIVLLFEGNYVHLAMQKFSSH 684
++K++ EI +LAQDQYGNYVVQ +L+ P STI+ G V ++ QKF+S+
Sbjct: 864 TQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSTIIKELAGKIVQMSQQKFASN 923
Query: 685 VVEKCLSVLDDESRSRIIYELLSAPH----FAQLLQDPHANYVVQSALKHSEGDVHNSLV 740
VVEKCL+ R ++ E+L +++D ANYVVQ L+ + ++
Sbjct: 924 VVEKCLTFSGPAERQILVSEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDHQRELIL 983
Query: 741 EAIESHKAISRNSPYSKKIFSQ 762
I+ H + Y K I ++
Sbjct: 984 SRIKVHLNALKKYTYGKHIVAR 1005
Score = 53.9 bits (128), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 94/220 (42%), Gaps = 45/220 (20%)
Query: 442 KYNSLAEARGCVYLIAKDQHGCRFLQRVFEEGTPEDVQVIFNEIIEHVVELMINPFGNYL 501
K + E G + +DQ+G +Q+ E E + I + + VV L +P+G +
Sbjct: 792 KIEMVKELDGNIMRCVRDQNGNHVIQKCIECVPEEAIDFIVSTFFDQVVTLSTHPYGCRV 851
Query: 502 MQKLLEVCNEEQRLQIILMVTQEPGQLVRISLNTHGTRVVQKLIETLKTRQQISLVVSAL 561
+Q++LE C Q ++ + G + ++ + +G VVQ ++E K ++ +
Sbjct: 852 IQRVLEHCESPATQQKVM--DEILGAVSMLAQDQYGNYVVQHVLEHGKPHERST------ 903
Query: 562 EPGFLALIKDLNGNHVVQHCLQCLSNGDNKFIFVAAAKYCAEIATHQHGCCVLQKCIGHS 621
+IK+L G K + ++ K+ + V++KC+ S
Sbjct: 904 ------IIKELAG----------------KIVQMSQQKFASN---------VVEKCLTFS 932
Query: 622 SGEHREKLVGEISANA------LLLAQDQYGNYVVQFILD 655
R+ LV E+ + +DQ+ NYVVQ +L+
Sbjct: 933 GPAERQILVSEMLGTTDENEPLQAMMKDQFANYVVQKVLE 972
>Medtr4g064670.2 | pumilio Mpt5 protein, putative | HC |
chr4:24134583-24140955 | 20130731
Length = 954
Score = 189 bits (480), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 108/322 (33%), Positives = 174/322 (54%), Gaps = 9/322 (2%)
Query: 446 LAEARGCVYLIAKDQHGCRFLQRVFEEGTPEDVQVIFNEIIEHVVELMINPFGNYLMQKL 505
L+E G V + DQ+G RF+Q+ E T E+ +++ EI+ H + LM + FGNY++QK
Sbjct: 617 LSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEIMPHALALMTDVFGNYVVQKF 676
Query: 506 LEVCNEEQRLQIILMVTQEPGQLVRISLNTHGTRVVQKLIETLKTRQQISLVVSALEPGF 565
E QR ++ + G ++ +SL +G RV+QK IE + Q+I +V L+
Sbjct: 677 FEHGLAPQRRELANKLI---GHVLTLSLQMYGCRVIQKAIEVVDLDQKIEMV-KELDGNI 732
Query: 566 LALIKDLNGNHVVQHCLQCLSNGDNKFIFVAAAKYCAEIATHQHGCCVLQKCIGH-SSGE 624
+ ++D NGNHV+Q C++C+ FI ++TH +GC V+Q+ + H S
Sbjct: 733 MRCVRDQNGNHVIQKCIECVPEEAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCESPA 792
Query: 625 HREKLVGEISANALLLAQDQYGNYVVQFILDLRIPSATSTIVLLFEGNYVHLAMQKFSSH 684
++K++ EI +LAQDQYGNYVVQ +L+ P STI+ G V ++ QKF+S+
Sbjct: 793 TQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSTIIKELAGKIVQMSQQKFASN 852
Query: 685 VVEKCLSVLDDESRSRIIYELLSAPH----FAQLLQDPHANYVVQSALKHSEGDVHNSLV 740
VVEKCL+ R ++ E+L +++D ANYVVQ L+ + ++
Sbjct: 853 VVEKCLTFSGPAERQILVSEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDHQRELIL 912
Query: 741 EAIESHKAISRNSPYSKKIFSQ 762
I+ H + Y K I ++
Sbjct: 913 SRIKVHLNALKKYTYGKHIVAR 934
Score = 53.9 bits (128), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 94/220 (42%), Gaps = 45/220 (20%)
Query: 442 KYNSLAEARGCVYLIAKDQHGCRFLQRVFEEGTPEDVQVIFNEIIEHVVELMINPFGNYL 501
K + E G + +DQ+G +Q+ E E + I + + VV L +P+G +
Sbjct: 721 KIEMVKELDGNIMRCVRDQNGNHVIQKCIECVPEEAIDFIVSTFFDQVVTLSTHPYGCRV 780
Query: 502 MQKLLEVCNEEQRLQIILMVTQEPGQLVRISLNTHGTRVVQKLIETLKTRQQISLVVSAL 561
+Q++LE C Q ++ + G + ++ + +G VVQ ++E K ++ +
Sbjct: 781 IQRVLEHCESPATQQKVM--DEILGAVSMLAQDQYGNYVVQHVLEHGKPHERST------ 832
Query: 562 EPGFLALIKDLNGNHVVQHCLQCLSNGDNKFIFVAAAKYCAEIATHQHGCCVLQKCIGHS 621
+IK+L G K + ++ K+ + V++KC+ S
Sbjct: 833 ------IIKELAG----------------KIVQMSQQKFASN---------VVEKCLTFS 861
Query: 622 SGEHREKLVGEISANA------LLLAQDQYGNYVVQFILD 655
R+ LV E+ + +DQ+ NYVVQ +L+
Sbjct: 862 GPAERQILVSEMLGTTDENEPLQAMMKDQFANYVVQKVLE 901
>Medtr2g036900.2 | pumilio-family RNA-binding repeatprotein | HC |
chr2:16007791-15999134 | 20130731
Length = 984
Score = 188 bits (478), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 106/322 (32%), Positives = 175/322 (54%), Gaps = 9/322 (2%)
Query: 446 LAEARGCVYLIAKDQHGCRFLQRVFEEGTPEDVQVIFNEIIEHVVELMINPFGNYLMQKL 505
L++ G + + DQHG RF+Q+ E E+ ++F E++ H +LM + FGNY++QK
Sbjct: 654 LSDIIGHIVEFSSDQHGSRFIQQKLESCGAEEKALVFKEVLPHASKLMTDVFGNYVIQKF 713
Query: 506 LEVCNEEQRLQIILMVTQEPGQLVRISLNTHGTRVVQKLIETLKTRQQISLVVSALEPGF 565
E N EQR ++ + GQ++ +SL +G RV+QK +E ++ Q+ LV L+
Sbjct: 714 FEYGNPEQRKELAEKLA---GQILPLSLQMYGCRVIQKALEVIEHEQKAQLV-RELDGNI 769
Query: 566 LALIKDLNGNHVVQHCLQCLSNGDNKFIFVAAAKYCAEIATHQHGCCVLQKCIGHSSGEH 625
+ ++D NGNHV+Q C++ + FI A A ++ H +GC V+Q+ + H + E
Sbjct: 770 MRCVRDQNGNHVIQKCIESIPTNKIGFILSAFRGQVANLSMHPYGCRVIQRILEHCTDEV 829
Query: 626 R-EKLVGEISANALLLAQDQYGNYVVQFILDLRIPSATSTIVLLFEGNYVHLAMQKFSSH 684
+ + +V EI + LAQDQYGNYV Q +L+ P S I+ G+ V L+ KF+S+
Sbjct: 830 QCQFIVDEILESVCSLAQDQYGNYVTQHVLERGRPQERSQIISKLSGHVVQLSQHKFASN 889
Query: 685 VVEKCLSVLDDESRSRIIYELLS----APHFAQLLQDPHANYVVQSALKHSEGDVHNSLV 740
VVEKCL D R +I E+++ + +++D ANYV+Q + + L+
Sbjct: 890 VVEKCLEYGDASEREVLIVEIIAHDEQNDNLLTMMKDQFANYVIQKVIDICSENQRARLL 949
Query: 741 EAIESHKAISRNSPYSKKIFSQ 762
I +H + Y K I ++
Sbjct: 950 SHIRAHANALKKYTYGKHIVAR 971
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 88/204 (43%), Gaps = 4/204 (1%)
Query: 544 LIETLKTRQQISLVVSALEPGFLALIKDLNGNHVVQHCLQCLSNGDNKFIFVAAAKYCAE 603
+E LK+ + +S + + D +G+ +Q L+ + +F + ++
Sbjct: 640 FLEELKSGKGRRFELSDIIGHIVEFSSDQHGSRFIQQKLESCGAEEKALVFKEVLPHASK 699
Query: 604 IATHQHGCCVLQKCIGHSSGEHREKLVGEISANALLLAQDQYGNYVVQFILDLRIPSATS 663
+ T G V+QK + + E R++L +++ L L+ YG V+Q L++ +
Sbjct: 700 LMTDVFGNYVIQKFFEYGNPEQRKELAEKLAGQILPLSLQMYGCRVIQKALEVIEHEQKA 759
Query: 664 TIVLLFEGNYVHLAMQKFSSHVVEKCLSVLDDESRSRIIYELLSAPHFAQLLQDPHANYV 723
+V +GN + + +HV++KC+ + I+ A L P+ V
Sbjct: 760 QLVRELDGNIMRCVRDQNGNHVIQKCIESIPTNKIGFILSAFRG--QVANLSMHPYGCRV 817
Query: 724 VQSALKHSEGDVHNSLV--EAIES 745
+Q L+H +V + E +ES
Sbjct: 818 IQRILEHCTDEVQCQFIVDEILES 841
>Medtr2g036900.1 | pumilio-family RNA-binding repeatprotein | HC |
chr2:16007791-15999134 | 20130731
Length = 984
Score = 188 bits (478), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 106/322 (32%), Positives = 175/322 (54%), Gaps = 9/322 (2%)
Query: 446 LAEARGCVYLIAKDQHGCRFLQRVFEEGTPEDVQVIFNEIIEHVVELMINPFGNYLMQKL 505
L++ G + + DQHG RF+Q+ E E+ ++F E++ H +LM + FGNY++QK
Sbjct: 654 LSDIIGHIVEFSSDQHGSRFIQQKLESCGAEEKALVFKEVLPHASKLMTDVFGNYVIQKF 713
Query: 506 LEVCNEEQRLQIILMVTQEPGQLVRISLNTHGTRVVQKLIETLKTRQQISLVVSALEPGF 565
E N EQR ++ + GQ++ +SL +G RV+QK +E ++ Q+ LV L+
Sbjct: 714 FEYGNPEQRKELAEKLA---GQILPLSLQMYGCRVIQKALEVIEHEQKAQLV-RELDGNI 769
Query: 566 LALIKDLNGNHVVQHCLQCLSNGDNKFIFVAAAKYCAEIATHQHGCCVLQKCIGHSSGEH 625
+ ++D NGNHV+Q C++ + FI A A ++ H +GC V+Q+ + H + E
Sbjct: 770 MRCVRDQNGNHVIQKCIESIPTNKIGFILSAFRGQVANLSMHPYGCRVIQRILEHCTDEV 829
Query: 626 R-EKLVGEISANALLLAQDQYGNYVVQFILDLRIPSATSTIVLLFEGNYVHLAMQKFSSH 684
+ + +V EI + LAQDQYGNYV Q +L+ P S I+ G+ V L+ KF+S+
Sbjct: 830 QCQFIVDEILESVCSLAQDQYGNYVTQHVLERGRPQERSQIISKLSGHVVQLSQHKFASN 889
Query: 685 VVEKCLSVLDDESRSRIIYELLS----APHFAQLLQDPHANYVVQSALKHSEGDVHNSLV 740
VVEKCL D R +I E+++ + +++D ANYV+Q + + L+
Sbjct: 890 VVEKCLEYGDASEREVLIVEIIAHDEQNDNLLTMMKDQFANYVIQKVIDICSENQRARLL 949
Query: 741 EAIESHKAISRNSPYSKKIFSQ 762
I +H + Y K I ++
Sbjct: 950 SHIRAHANALKKYTYGKHIVAR 971
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 88/204 (43%), Gaps = 4/204 (1%)
Query: 544 LIETLKTRQQISLVVSALEPGFLALIKDLNGNHVVQHCLQCLSNGDNKFIFVAAAKYCAE 603
+E LK+ + +S + + D +G+ +Q L+ + +F + ++
Sbjct: 640 FLEELKSGKGRRFELSDIIGHIVEFSSDQHGSRFIQQKLESCGAEEKALVFKEVLPHASK 699
Query: 604 IATHQHGCCVLQKCIGHSSGEHREKLVGEISANALLLAQDQYGNYVVQFILDLRIPSATS 663
+ T G V+QK + + E R++L +++ L L+ YG V+Q L++ +
Sbjct: 700 LMTDVFGNYVIQKFFEYGNPEQRKELAEKLAGQILPLSLQMYGCRVIQKALEVIEHEQKA 759
Query: 664 TIVLLFEGNYVHLAMQKFSSHVVEKCLSVLDDESRSRIIYELLSAPHFAQLLQDPHANYV 723
+V +GN + + +HV++KC+ + I+ A L P+ V
Sbjct: 760 QLVRELDGNIMRCVRDQNGNHVIQKCIESIPTNKIGFILSAFRG--QVANLSMHPYGCRV 817
Query: 724 VQSALKHSEGDVHNSLV--EAIES 745
+Q L+H +V + E +ES
Sbjct: 818 IQRILEHCTDEVQCQFIVDEILES 841
>Medtr5g080390.1 | pumilio-family RNA-binding repeatprotein | HC |
chr5:34410395-34418672 | 20130731
Length = 1012
Score = 187 bits (476), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 113/354 (31%), Positives = 188/354 (53%), Gaps = 18/354 (5%)
Query: 423 GAYENPRSPRIDSPFPS--LPKYNS-------LAEARGCVYLIAKDQHGCRFLQRVFEEG 473
GA+ + +D FPS L ++ S L+E G V + DQ+G RF+Q+ E
Sbjct: 638 GAWHSDAVSSLDENFPSSLLDEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETA 697
Query: 474 TPEDVQVIFNEIIEHVVELMINPFGNYLMQKLLEVCNEEQRLQIILMVTQEPGQLVRISL 533
+ E+ ++FNEI+ + LM + FGNY++QK E EQ I + Q G ++ +SL
Sbjct: 698 SMEEKTMVFNEIMPKALTLMTDVFGNYVVQKFFEHGTAEQ---IRELADQLTGHVLTLSL 754
Query: 534 NTHGTRVVQKLIETLKTRQQISLVVSALEPGFLALIKDLNGNHVVQHCLQCLSNGDNKFI 593
+G RV+QK IE + Q+ +V + L+ + ++D NGNHV+Q C++C+ + KFI
Sbjct: 755 QMYGCRVIQKAIEVVNLDQKTKMV-TELDGHIMRCVRDQNGNHVIQKCIECVPEDEIKFI 813
Query: 594 FVAAAKYCAEIATHQHGCCVLQKCIGHSSGEHREK-LVGEISANALLLAQDQYGNYVVQF 652
++TH +GC V+Q+ + + ++ ++ EI +LAQDQYGNYVVQ
Sbjct: 814 VSTFYDQVVTLSTHPYGCRVIQRVLEYCHDPKTQQIMMDEILQCVSMLAQDQYGNYVVQH 873
Query: 653 ILDLRIPSATSTIVLLFEGNYVHLAMQKFSSHVVEKCLSVLDDESRSRIIYELLSAPH-- 710
+L+ P + I+ F G V ++ QKF+S+V+EKCLS R ++ E++ +
Sbjct: 874 VLEHGKPHERTAIIKEFTGQIVQMSQQKFASNVIEKCLSFGTPTERQVLVNEMIGSTDDN 933
Query: 711 --FAQLLQDPHANYVVQSALKHSEGDVHNSLVEAIESHKAISRNSPYSKKIFSQ 762
+++D ANYVVQ L+ + ++ I+ H + Y K I ++
Sbjct: 934 EPLQVMMKDQFANYVVQKVLETCDDQQLELILNRIKVHLNALKKYTYGKHIVAR 987
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 80/179 (44%), Gaps = 2/179 (1%)
Query: 586 SNGDNKFIFVAAAKYCAEIATHQHGCCVLQKCIGHSSGEHREKLVGEISANALLLAQDQY 645
SN F A + E + Q+G +Q+ + +S E + + EI AL L D +
Sbjct: 662 SNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETASMEEKTMVFNEIMPKALTLMTDVF 721
Query: 646 GNYVVQFILDLRIPSATSTIVLLFEGNYVHLAMQKFSSHVVEKCLSVLDDESRSRIIYEL 705
GNYVVQ + + G+ + L++Q + V++K + V++ + +++++ EL
Sbjct: 722 GNYVVQKFFEHGTAEQIRELADQLTGHVLTLSLQMYGCRVIQKAIEVVNLDQKTKMVTEL 781
Query: 706 LSAPHFAQLLQDPHANYVVQSALKHSEGDVHNSLVEAIESHKAISRNSPYSKKIFSQKL 764
H + ++D + N+V+Q ++ D +V PY ++ + L
Sbjct: 782 DG--HIMRCVRDQNGNHVIQKCIECVPEDEIKFIVSTFYDQVVTLSTHPYGCRVIQRVL 838
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 72/148 (48%), Gaps = 4/148 (2%)
Query: 452 CVYLIAKDQHGCRFLQRVFEEGTPEDVQVIFNEIIEHVVELMINPFGNYLMQKLLEVCNE 511
CV ++A+DQ+G +Q V E G P + I E +V++ F + +++K L
Sbjct: 857 CVSMLAQDQYGNYVVQHVLEHGKPHERTAIIKEFTGQIVQMSQQKFASNVIEKCLSFGTP 916
Query: 512 EQRLQII---LMVTQEPGQLVRISLNTHGTRVVQKLIETLKTRQQISLVVSALEPGFLAL 568
+R ++ + T + L + + VVQK++ET QQ+ L+++ ++ AL
Sbjct: 917 TERQVLVNEMIGSTDDNEPLQVMMKDQFANYVVQKVLETCDD-QQLELILNRIKVHLNAL 975
Query: 569 IKDLNGNHVVQHCLQCLSNGDNKFIFVA 596
K G H+V + ++ G+ + F+
Sbjct: 976 KKYTYGKHIVARVEKLVAAGERRISFLT 1003
>Medtr1g106975.1 | pumilio-family RNA-binding repeatprotein | LC |
chr1:48418651-48415981 | 20130731
Length = 465
Score = 186 bits (472), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 104/348 (29%), Positives = 193/348 (55%), Gaps = 9/348 (2%)
Query: 421 AFGAYENPR---SPRIDSPFPSLPKYNSLAEARGCVYLIAKDQHGCRFLQRVFEEGTPED 477
F YE+ R P I++ + + + RG + +A ++ CR++Q+ G P D
Sbjct: 103 GFPGYEDYRIWQGPSIEAT--AAQRMHCFHTCRGSLVSMAMNRRDCRYIQQKIRMGNPTD 160
Query: 478 VQVIFNEIIEHVVELMINPFGNYLMQKLLE----VCNEEQRLQIILMVTQEPGQLVRISL 533
V +I E+ + + LM +P+GN+L+QK+ E + +Q+ ++ ++ +L + +
Sbjct: 161 VALILYEVKDSLHMLMTHPYGNHLIQKIFEARRGIITRDQKHSLVYLIISNYQKLRNVCM 220
Query: 534 NTHGTRVVQKLIETLKTRQQISLVVSALEPGFLALIKDLNGNHVVQHCLQCLSNGDNKFI 593
+ HGTRV+Q +++ +K +VV ++ +AL+K+ NG++V+ CL+ I
Sbjct: 221 DFHGTRVMQIMLKNIKCLFMQYVVVYTMKHITVALMKNFNGSYVIVECLKLFPPEHQNII 280
Query: 594 FVAAAKYCAEIATHQHGCCVLQKCIGHSSGEHREKLVGEISANALLLAQDQYGNYVVQFI 653
A+ C +I+T++ G V+QKC+ + LV +I +NA++LA+DQYGNYV++ +
Sbjct: 281 LDEVARNCVDISTNKVGTSVIQKCLRKGAITAIAPLVAKIISNAMILAEDQYGNYVLKCV 340
Query: 654 LDLRIPSATSTIVLLFEGNYVHLAMQKFSSHVVEKCLSVLDDESRSRIIYELLSAPHFAQ 713
+ ++ SA +V G +V L++ K++S+VVE L+ + I+ E++S+ F
Sbjct: 341 IMMKFASANEQMVKELRGQFVRLSVNKYASNVVENLLTFSKLDDVEVIVEEIISSHDFLN 400
Query: 714 LLQDPHANYVVQSALKHSEGDVHNSLVEAIESHKAISRNSPYSKKIFS 761
+LQDP NYV Q +LK ++G + L I S+ + PY KK+ +
Sbjct: 401 VLQDPFGNYVAQRSLKCTQGHLRRKLSNLIISNHRTLHSHPYGKKVLT 448
>Medtr1g094630.1 | pumilio-family RNA-binding repeatprotein | HC |
chr1:42524277-42532024 | 20130731
Length = 973
Score = 183 bits (465), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 104/315 (33%), Positives = 170/315 (53%), Gaps = 9/315 (2%)
Query: 453 VYLIAKDQHGCRFLQRVFEEGTPEDVQVIFNEIIEHVVELMINPFGNYLMQKLLEVCNEE 512
V + DQ+G RF+Q+ E + E+ IF EI+ H LM + FGNY++QK E +
Sbjct: 647 VVQFSTDQYGSRFIQQKLETASVEEKTKIFPEILPHARALMTDVFGNYVIQKFFEHGTDS 706
Query: 513 QRLQIILMVTQEPGQLVRISLNTHGTRVVQKLIETLKTRQQISLVVSALEPGFLALIKDL 572
QR + + Q G ++ +SL +G RV+QK +E + QQ S +VS L + ++D
Sbjct: 707 QRKE---LANQLTGHVLPLSLQMYGCRVIQKALEVVDVDQQ-SQMVSELSGAIMKCVRDQ 762
Query: 573 NGNHVVQHCLQCLSNGDNKFIFVAAAKYCAEIATHQHGCCVLQKCIGHSSG-EHREKLVG 631
NGNHV+Q C++ + +FI + ++TH +GC V+Q+ + H + +E ++
Sbjct: 763 NGNHVIQKCIESVPQNRIQFIITSFYGQVVALSTHPYGCRVIQRVLEHCDDLKTQEIIME 822
Query: 632 EISANALLLAQDQYGNYVVQFILDLRIPSATSTIVLLFEGNYVHLAMQKFSSHVVEKCLS 691
EI + LAQDQYGNYV+Q IL+ P+ + ++ G V ++ QKF+S+V+EKCL+
Sbjct: 823 EIMQSVCTLAQDQYGNYVIQHILEHGKPNERTIVISKLAGQIVKMSQQKFASNVIEKCLA 882
Query: 692 VLDDESRSRIIYELLSAPH----FAQLLQDPHANYVVQSALKHSEGDVHNSLVEAIESHK 747
E R ++ E+L +++DP NYVVQ L+ + ++ I+ H
Sbjct: 883 FGSPEERQILVNEMLGTSDENEPLQAMMKDPFGNYVVQKVLETCDDQSLELILSRIKVHL 942
Query: 748 AISRNSPYSKKIFSQ 762
+ Y K I S+
Sbjct: 943 NALKRYTYGKHIVSR 957
Score = 83.6 bits (205), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 127/257 (49%), Gaps = 15/257 (5%)
Query: 451 GCVYLIAKDQHGCRFLQRVFEEGTPEDVQVIFNEIIEHVVELMINPFGNYLMQKLLEVCN 510
G V ++ +GCR +Q+ E + + +E+ +++ + + GN+++QK +E
Sbjct: 717 GHVLPLSLQMYGCRVIQKALEVVDVDQQSQMVSELSGAIMKCVRDQNGNHVIQKCIESV- 775
Query: 511 EEQRLQIILMVTQEPGQLVRISLNTHGTRVVQKLIETLKTRQQISLVVSALEPGFLALIK 570
+ R+Q I +T GQ+V +S + +G RV+Q+++E + +++ + L +
Sbjct: 776 PQNRIQFI--ITSFYGQVVALSTHPYGCRVIQRVLEHCDDLKTQEIIMEEIMQSVCTLAQ 833
Query: 571 DLNGNHVVQHCLQCLSNGDNKFIFVAAAKYCAEIATHQHGCCVLQKCIGHSSGEHREKLV 630
D GN+V+QH L+ + + A +++ + V++KC+ S E R+ LV
Sbjct: 834 DQYGNYVIQHILEHGKPNERTIVISKLAGQIVKMSQQKFASNVIEKCLAFGSPEERQILV 893
Query: 631 GEISANA------LLLAQDQYGNYVVQFILDLRIPSATSTIVLLFEGNYVHL-AMQKFS- 682
E+ + + +D +GNYVVQ +L+ ++ L+ VHL A+++++
Sbjct: 894 NEMLGTSDENEPLQAMMKDPFGNYVVQKVLE---TCDDQSLELILSRIKVHLNALKRYTY 950
Query: 683 -SHVVEKCLSVLDDESR 698
H+V + ++ R
Sbjct: 951 GKHIVSRVEKLITTGER 967
Score = 60.5 bits (145), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 70/130 (53%), Gaps = 2/130 (1%)
Query: 600 YCAEIATHQHGCCVLQKCIGHSSGEHREKLVGEISANALLLAQDQYGNYVVQFILDLRIP 659
+ + +T Q+G +Q+ + +S E + K+ EI +A L D +GNYV+Q +
Sbjct: 646 HVVQFSTDQYGSRFIQQKLETASVEEKTKIFPEILPHARALMTDVFGNYVIQKFFEHGTD 705
Query: 660 SATSTIVLLFEGNYVHLAMQKFSSHVVEKCLSVLDDESRSRIIYELLSAPHFAQLLQDPH 719
S + G+ + L++Q + V++K L V+D + +S+++ EL A + ++D +
Sbjct: 706 SQRKELANQLTGHVLPLSLQMYGCRVIQKALEVVDVDQQSQMVSELSGA--IMKCVRDQN 763
Query: 720 ANYVVQSALK 729
N+V+Q ++
Sbjct: 764 GNHVIQKCIE 773
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 63/113 (55%), Gaps = 8/113 (7%)
Query: 446 LAEARGCVYLIAKDQHGCRFLQRVFEEGTPEDVQVIFNEII------EHVVELMINPFGN 499
+++ G + +++ + +++ G+PE+ Q++ NE++ E + +M +PFGN
Sbjct: 857 ISKLAGQIVKMSQQKFASNVIEKCLAFGSPEERQILVNEMLGTSDENEPLQAMMKDPFGN 916
Query: 500 YLMQKLLEVCNEEQRLQIIL-MVTQEPGQLVRISLNTHGTRVVQKLIETLKTR 551
Y++QK+LE C ++Q L++IL + L R + H V+KLI T + R
Sbjct: 917 YVVQKVLETC-DDQSLELILSRIKVHLNALKRYTYGKHIVSRVEKLITTGERR 968
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 78/197 (39%), Gaps = 2/197 (1%)
Query: 534 NTHGTRVVQKLIETLKTRQQISLVVSALEPGFLALIKDLNGNHVVQHCLQCLSNGDNKFI 593
N +R L++ K + +S + + D G+ +Q L+ S + I
Sbjct: 616 NNMESRFASSLLDEFKNNKTKPFELSDIIDHVVQFSTDQYGSRFIQQKLETASVEEKTKI 675
Query: 594 FVAAAKYCAEIATHQHGCCVLQKCIGHSSGEHREKLVGEISANALLLAQDQYGNYVVQFI 653
F + + T G V+QK H + R++L +++ + L L+ YG V+Q
Sbjct: 676 FPEILPHARALMTDVFGNYVIQKFFEHGTDSQRKELANQLTGHVLPLSLQMYGCRVIQKA 735
Query: 654 LDLRIPSATSTIVLLFEGNYVHLAMQKFSSHVVEKCLSVLDDESRSRIIYELLSAPHFAQ 713
L++ S +V G + + +HV++KC+ + II
Sbjct: 736 LEVVDVDQQSQMVSELSGAIMKCVRDQNGNHVIQKCIESVPQNRIQFIITSFYG--QVVA 793
Query: 714 LLQDPHANYVVQSALKH 730
L P+ V+Q L+H
Sbjct: 794 LSTHPYGCRVIQRVLEH 810
>Medtr2g036900.3 | pumilio-family RNA-binding repeatprotein | HC |
chr2:16007791-16000131 | 20130731
Length = 926
Score = 177 bits (450), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 94/263 (35%), Positives = 151/263 (57%), Gaps = 5/263 (1%)
Query: 446 LAEARGCVYLIAKDQHGCRFLQRVFEEGTPEDVQVIFNEIIEHVVELMINPFGNYLMQKL 505
L++ G + + DQHG RF+Q+ E E+ ++F E++ H +LM + FGNY++QK
Sbjct: 654 LSDIIGHIVEFSSDQHGSRFIQQKLESCGAEEKALVFKEVLPHASKLMTDVFGNYVIQKF 713
Query: 506 LEVCNEEQRLQIILMVTQEPGQLVRISLNTHGTRVVQKLIETLKTRQQISLVVSALEPGF 565
E N EQR ++ + GQ++ +SL +G RV+QK +E ++ Q+ LV L+
Sbjct: 714 FEYGNPEQRKELAEKLA---GQILPLSLQMYGCRVIQKALEVIEHEQKAQLV-RELDGNI 769
Query: 566 LALIKDLNGNHVVQHCLQCLSNGDNKFIFVAAAKYCAEIATHQHGCCVLQKCIGHSSGEH 625
+ ++D NGNHV+Q C++ + FI A A ++ H +GC V+Q+ + H + E
Sbjct: 770 MRCVRDQNGNHVIQKCIESIPTNKIGFILSAFRGQVANLSMHPYGCRVIQRILEHCTDEV 829
Query: 626 R-EKLVGEISANALLLAQDQYGNYVVQFILDLRIPSATSTIVLLFEGNYVHLAMQKFSSH 684
+ + +V EI + LAQDQYGNYV Q +L+ P S I+ G+ V L+ KF+S+
Sbjct: 830 QCQFIVDEILESVCSLAQDQYGNYVTQHVLERGRPQERSQIISKLSGHVVQLSQHKFASN 889
Query: 685 VVEKCLSVLDDESRSRIIYELLS 707
VVEKCL D R +I E+++
Sbjct: 890 VVEKCLEYGDASEREVLIVEIIA 912
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 88/204 (43%), Gaps = 4/204 (1%)
Query: 544 LIETLKTRQQISLVVSALEPGFLALIKDLNGNHVVQHCLQCLSNGDNKFIFVAAAKYCAE 603
+E LK+ + +S + + D +G+ +Q L+ + +F + ++
Sbjct: 640 FLEELKSGKGRRFELSDIIGHIVEFSSDQHGSRFIQQKLESCGAEEKALVFKEVLPHASK 699
Query: 604 IATHQHGCCVLQKCIGHSSGEHREKLVGEISANALLLAQDQYGNYVVQFILDLRIPSATS 663
+ T G V+QK + + E R++L +++ L L+ YG V+Q L++ +
Sbjct: 700 LMTDVFGNYVIQKFFEYGNPEQRKELAEKLAGQILPLSLQMYGCRVIQKALEVIEHEQKA 759
Query: 664 TIVLLFEGNYVHLAMQKFSSHVVEKCLSVLDDESRSRIIYELLSAPHFAQLLQDPHANYV 723
+V +GN + + +HV++KC+ + I+ A L P+ V
Sbjct: 760 QLVRELDGNIMRCVRDQNGNHVIQKCIESIPTNKIGFILSAFRG--QVANLSMHPYGCRV 817
Query: 724 VQSALKHSEGDVHNSLV--EAIES 745
+Q L+H +V + E +ES
Sbjct: 818 IQRILEHCTDEVQCQFIVDEILES 841
>Medtr2g006930.1 | pumilio-family RNA-binding repeatprotein | LC |
chr2:729409-732877 | 20130731
Length = 434
Score = 173 bits (439), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 107/364 (29%), Positives = 196/364 (53%), Gaps = 17/364 (4%)
Query: 405 GFAKHLQRPELDIQHQAFGAYENPRSPRIDSPFPSLPKYNSLAEARGCVYLIAKDQHGCR 464
G HL + + A +P + + F S P RG V +A + C+
Sbjct: 68 GLFTHLDFYRMRHRASVEAALPHPHTDNYSNHFASPP-------WRGFVVSMAMNHRECQ 120
Query: 465 FLQRVFEEGTPEDVQVIFNEIIEHVVELMINPFGNYLMQKLLE----VCNEEQRLQIILM 520
+LQ V +EG P V +I E+ +++ ELM + FG+YL+QK+ + + ++ L + L+
Sbjct: 121 YLQAVIDEGNPVYVTMILLEVKDYLHELMTHRFGSYLIQKIFQARRGMTCQQMDLTVFLI 180
Query: 521 VTQEPGQLVRISLNTHGTRVVQKLIETLKTRQQISLVVSALEPGFLALIKDLNGNHVVQH 580
++ +L + ++ HGTR +Q +I ++ +VV L+ + L+K++NG++V+
Sbjct: 181 ISNHR-KLKDVCMDHHGTRAMQTMIANVRHPFTGYVVVYMLQHITIPLMKNVNGSYVIVQ 239
Query: 581 CLQCLSNGDNKFIFVAAAKYCAEIATHQHGCCVLQKCI---GHSSGEHREKLVGEISANA 637
C++ K I A+ C +IAT + GC ++KC+ G +S + LV +I +NA
Sbjct: 240 CVKFFPPKHKKIILDEVARNCVDIATDKIGCSAVKKCLDYGGRTSAI--DILVAQIISNA 297
Query: 638 LLLAQDQYGNYVVQFILDLRIPSATSTIVLLFEGNYVHLAMQKFSSHVVEKCLSVLDDES 697
++L++D YGNYVVQ ++ ++IP A +V + L++ K++S+VVE LS + ++
Sbjct: 298 MILSEDPYGNYVVQRVIQMKIPLANEQMVQELRSKFDRLSVNKYASNVVEYLLSFSNQDA 357
Query: 698 RSRIIYELLSAPHFAQLLQDPHANYVVQSALKHSEGDVHNSLVEAIESHKAISRNSPYSK 757
I E++ + +F +L DP+ NYV Q AL+ ++G V I+SH+ ++ Y K
Sbjct: 358 VKVIAEEIMRSRNFLNVLHDPYGNYVAQRALRCTKGHVRRRFSSLIKSHRLALQSHIYGK 417
Query: 758 KIFS 761
+ +
Sbjct: 418 NVLT 421
>Medtr2g097670.3 | pumilio Mpt5 protein, putative | HC |
chr2:41717566-41723738 | 20130731
Length = 917
Score = 141 bits (356), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 118/207 (57%), Gaps = 5/207 (2%)
Query: 446 LAEARGCVYLIAKDQHGCRFLQRVFEEGTPEDVQVIFNEIIEHVVELMINPFGNYLMQKL 505
L+E G V + DQ+G RF+Q+ E T E+ +++ EI H + LM + FGNY++QK
Sbjct: 710 LSEISGHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEITPHALALMTDVFGNYVVQKF 769
Query: 506 LEVCNEEQRLQIILMVTQEPGQLVRISLNTHGTRVVQKLIETLKTRQQISLVVSALEPGF 565
E QR + + + G ++ +SL +G RV+QK IE + Q+I + V L+
Sbjct: 770 FEHGLASQRRE---LANKLYGHVLTLSLQMYGCRVIQKAIEVVDLDQKIKM-VQELDGNI 825
Query: 566 LALIKDLNGNHVVQHCLQCLSNGDNKFIFVAAAKYCAEIATHQHGCCVLQKCIGHSSG-E 624
+ ++D NGNHV+Q C++C+ FI ++TH +GC V+Q+ + H +
Sbjct: 826 MRCVRDQNGNHVIQKCIECVPEDAIDFIISTFFDQVVTLSTHPYGCRVIQRVLEHCENPD 885
Query: 625 HREKLVGEISANALLLAQDQYGNYVVQ 651
++K++ EI +LAQDQYGNYVVQ
Sbjct: 886 TQQKVMDEILGAVSMLAQDQYGNYVVQ 912
Score = 84.7 bits (208), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 104/201 (51%), Gaps = 4/201 (1%)
Query: 526 GQLVRISLNTHGTRVVQKLIETLKTRQQISLVVSALEPGFLALIKDLNGNHVVQHCLQCL 585
G +V S + +G+R +Q+ +ET T ++ ++V + P LAL+ D+ GN+VVQ +
Sbjct: 715 GHVVEFSADQYGSRFIQQKLETATTEEK-NMVYQEITPHALALMTDVFGNYVVQKFFEHG 773
Query: 586 SNGDNKFIFVAAAKYCAEIATHQHGCCVLQKCIGHSSGEHREKLVGEISANALLLAQDQY 645
+ + + ++ +GC V+QK I + + K+V E+ N + +DQ
Sbjct: 774 LASQRRELANKLYGHVLTLSLQMYGCRVIQKAIEVVDLDQKIKMVQELDGNIMRCVRDQN 833
Query: 646 GNYVVQFILDLRIPSATSTIVLLFEGNYVHLAMQKFSSHVVEKCLSVLDD-ESRSRIIYE 704
GN+V+Q ++ A I+ F V L+ + V+++ L ++ +++ +++ E
Sbjct: 834 GNHVIQKCIECVPEDAIDFIISTFFDQVVTLSTHPYGCRVIQRVLEHCENPDTQQKVMDE 893
Query: 705 LLSAPHFAQLLQDPHANYVVQ 725
+L A + L QD + NYVVQ
Sbjct: 894 ILGA--VSMLAQDQYGNYVVQ 912
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 87/181 (48%), Gaps = 3/181 (1%)
Query: 586 SNGDNKFIFVAAAKYCAEIATHQHGCCVLQKCIGHSSGEHREKLVGEISANALLLAQDQY 645
SN F + + E + Q+G +Q+ + ++ E + + EI+ +AL L D +
Sbjct: 702 SNKTKCFELSEISGHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEITPHALALMTDVF 761
Query: 646 GNYVVQFILDLRIPSATSTIVLLFEGNYVHLAMQKFSSHVVEKCLSVLDDESRSRIIYEL 705
GNYVVQ + + S + G+ + L++Q + V++K + V+D + + +++ EL
Sbjct: 762 GNYVVQKFFEHGLASQRRELANKLYGHVLTLSLQMYGCRVIQKAIEVVDLDQKIKMVQEL 821
Query: 706 LSAPHFAQLLQDPHANYVVQSALKHSEGDVHNSLVEAIESHKAISRNSPYSKKIFSQKLL 765
+ + ++D + N+V+Q ++ D + ++ PY ++ Q++L
Sbjct: 822 DG--NIMRCVRDQNGNHVIQKCIECVPEDAIDFIISTFFDQVVTLSTHPYGCRVI-QRVL 878
Query: 766 K 766
+
Sbjct: 879 E 879
>Medtr2g006940.1 | pumilio-like protein | LC | chr2:736512-738484 |
20130731
Length = 379
Score = 137 bits (344), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 151/277 (54%), Gaps = 14/277 (5%)
Query: 450 RGCVYLIAKDQHGCRFLQRVFEEGTPEDVQVIFNEIIEHVVELMINPFGNYLMQKLLEV- 508
RG V +A + C++L + +EG P + +I +++ +++ +LM++ FG+ L++K+ E
Sbjct: 113 RGSVVSMAITERDCQYLHAIIDEGNPTNAAMILSKVKDYLHDLMMHRFGSTLIKKIFEAK 172
Query: 509 --CNEEQRLQIILMVTQEPGQLVRISLNTHGTRVVQKLIETLKTRQQISLVVSALEPGFL 566
EQ I+ ++ ++ + +N +GTRV+Q ++ + +V A++
Sbjct: 173 KGMAMEQMDSIVYLILANDRKMWDVCINYYGTRVMQTILHNTRHPFMKFVVAYAVKRNTT 232
Query: 567 ALIKDLNGNHVVQHCLQCLSNGDNKFIFVAAAKYCAEIATHQHGCCVLQKCIGHSSGEHR 626
AL+K+ NG+HV+ C++ + K I A+ C IAT + GC +++C+ H G
Sbjct: 233 ALMKNTNGSHVIVQCVKLFPSILKKMILDEVARNCCNIATDKIGCLAVKRCLKHGEGTAI 292
Query: 627 EKLVGEISANALLLAQDQYGNYVVQFILDLRIPSATSTIVLLFEGNYVHLAMQKFSSHVV 686
+ LV +I +NA++L +++ ++ P A ++ F+ + L+M K++S+V+
Sbjct: 293 DLLVTQIISNAMVL-----------YVIKMKFPLAKEWMIEEFQNKFDRLSMNKYASNVM 341
Query: 687 EKCLSVLDDESRSRIIYELLSAPHFAQLLQDPHANYV 723
E L + + I+ E++ + +F ++LQDP NYV
Sbjct: 342 EYLLRFSNKSAVKVIVEEIMRSRNFLKVLQDPFGNYV 378
>Medtr1g094630.3 | pumilio-family RNA-binding repeatprotein | HC |
chr1:42524306-42529214 | 20130731
Length = 846
Score = 135 bits (339), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 115/200 (57%), Gaps = 5/200 (2%)
Query: 453 VYLIAKDQHGCRFLQRVFEEGTPEDVQVIFNEIIEHVVELMINPFGNYLMQKLLEVCNEE 512
V + DQ+G RF+Q+ E + E+ IF EI+ H LM + FGNY++QK E +
Sbjct: 647 VVQFSTDQYGSRFIQQKLETASVEEKTKIFPEILPHARALMTDVFGNYVIQKFFEHGTDS 706
Query: 513 QRLQIILMVTQEPGQLVRISLNTHGTRVVQKLIETLKTRQQISLVVSALEPGFLALIKDL 572
QR ++ +T G ++ +SL +G RV+QK +E + QQ S +VS L + ++D
Sbjct: 707 QRKELANQLT---GHVLPLSLQMYGCRVIQKALEVVDVDQQ-SQMVSELSGAIMKCVRDQ 762
Query: 573 NGNHVVQHCLQCLSNGDNKFIFVAAAKYCAEIATHQHGCCVLQKCIGHSSG-EHREKLVG 631
NGNHV+Q C++ + +FI + ++TH +GC V+Q+ + H + +E ++
Sbjct: 763 NGNHVIQKCIESVPQNRIQFIITSFYGQVVALSTHPYGCRVIQRVLEHCDDLKTQEIIME 822
Query: 632 EISANALLLAQDQYGNYVVQ 651
EI + LAQDQYGNYV+Q
Sbjct: 823 EIMQSVCTLAQDQYGNYVIQ 842
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 96/198 (48%), Gaps = 2/198 (1%)
Query: 528 LVRISLNTHGTRVVQKLIETLKTRQQISLVVSALEPGFLALIKDLNGNHVVQHCLQCLSN 587
+V+ S + +G+R +Q+ +ET ++ + L P AL+ D+ GN+V+Q + ++
Sbjct: 647 VVQFSTDQYGSRFIQQKLETASVEEKTKIFPEIL-PHARALMTDVFGNYVIQKFFEHGTD 705
Query: 588 GDNKFIFVAAAKYCAEIATHQHGCCVLQKCIGHSSGEHREKLVGEISANALLLAQDQYGN 647
K + + ++ +GC V+QK + + + ++V E+S + +DQ GN
Sbjct: 706 SQRKELANQLTGHVLPLSLQMYGCRVIQKALEVVDVDQQSQMVSELSGAIMKCVRDQNGN 765
Query: 648 YVVQFILDLRIPSATSTIVLLFEGNYVHLAMQKFSSHVVEKCLSVLDDESRSRIIYELLS 707
+V+Q ++ + I+ F G V L+ + V+++ L DD II E +
Sbjct: 766 HVIQKCIESVPQNRIQFIITSFYGQVVALSTHPYGCRVIQRVLEHCDDLKTQEIIMEEI- 824
Query: 708 APHFAQLLQDPHANYVVQ 725
L QD + NYV+Q
Sbjct: 825 MQSVCTLAQDQYGNYVIQ 842
Score = 60.8 bits (146), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 70/130 (53%), Gaps = 2/130 (1%)
Query: 600 YCAEIATHQHGCCVLQKCIGHSSGEHREKLVGEISANALLLAQDQYGNYVVQFILDLRIP 659
+ + +T Q+G +Q+ + +S E + K+ EI +A L D +GNYV+Q +
Sbjct: 646 HVVQFSTDQYGSRFIQQKLETASVEEKTKIFPEILPHARALMTDVFGNYVIQKFFEHGTD 705
Query: 660 SATSTIVLLFEGNYVHLAMQKFSSHVVEKCLSVLDDESRSRIIYELLSAPHFAQLLQDPH 719
S + G+ + L++Q + V++K L V+D + +S+++ EL A + ++D +
Sbjct: 706 SQRKELANQLTGHVLPLSLQMYGCRVIQKALEVVDVDQQSQMVSELSGA--IMKCVRDQN 763
Query: 720 ANYVVQSALK 729
N+V+Q ++
Sbjct: 764 GNHVIQKCIE 773
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 69/129 (53%), Gaps = 3/129 (2%)
Query: 451 GCVYLIAKDQHGCRFLQRVFEEGTPEDVQVIFNEIIEHVVELMINPFGNYLMQKLLEVCN 510
G V ++ +GCR +Q+ E + + +E+ +++ + + GN+++QK +E
Sbjct: 717 GHVLPLSLQMYGCRVIQKALEVVDVDQQSQMVSELSGAIMKCVRDQNGNHVIQKCIESV- 775
Query: 511 EEQRLQIILMVTQEPGQLVRISLNTHGTRVVQKLIETLKTRQQISLVVSALEPGFLALIK 570
+ R+Q I +T GQ+V +S + +G RV+Q+++E + +++ + L +
Sbjct: 776 PQNRIQFI--ITSFYGQVVALSTHPYGCRVIQRVLEHCDDLKTQEIIMEEIMQSVCTLAQ 833
Query: 571 DLNGNHVVQ 579
D GN+V+Q
Sbjct: 834 DQYGNYVIQ 842
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 78/197 (39%), Gaps = 2/197 (1%)
Query: 534 NTHGTRVVQKLIETLKTRQQISLVVSALEPGFLALIKDLNGNHVVQHCLQCLSNGDNKFI 593
N +R L++ K + +S + + D G+ +Q L+ S + I
Sbjct: 616 NNMESRFASSLLDEFKNNKTKPFELSDIIDHVVQFSTDQYGSRFIQQKLETASVEEKTKI 675
Query: 594 FVAAAKYCAEIATHQHGCCVLQKCIGHSSGEHREKLVGEISANALLLAQDQYGNYVVQFI 653
F + + T G V+QK H + R++L +++ + L L+ YG V+Q
Sbjct: 676 FPEILPHARALMTDVFGNYVIQKFFEHGTDSQRKELANQLTGHVLPLSLQMYGCRVIQKA 735
Query: 654 LDLRIPSATSTIVLLFEGNYVHLAMQKFSSHVVEKCLSVLDDESRSRIIYELLSAPHFAQ 713
L++ S +V G + + +HV++KC+ + II
Sbjct: 736 LEVVDVDQQSQMVSELSGAIMKCVRDQNGNHVIQKCIESVPQNRIQFIITSFYG--QVVA 793
Query: 714 LLQDPHANYVVQSALKH 730
L P+ V+Q L+H
Sbjct: 794 LSTHPYGCRVIQRVLEH 810
>Medtr4g029480.1 | pumilio-family RNA-binding repeatprotein | LC |
chr4:10182211-10183126 | 20130731
Length = 263
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 52/100 (52%), Gaps = 32/100 (32%)
Query: 591 KFIFVAAAKYCAEIATHQHGCCVLQKCIGHSSGEHREKLVGEISANALLLAQDQYGNYVV 650
+FI+ AA ++C +AT QHGC +LQ+CI S+G ++ + E++A
Sbjct: 148 EFIYDAATRFCFGVATDQHGCYLLQRCIEFSNGNSQQNAIAELTAQ-------------- 193
Query: 651 QFILDLRIPSATSTIVLLFEGNYVHLAMQKFSSHVVEKCL 690
F+GNYV L++QKFS HVVEKCL
Sbjct: 194 ------------------FKGNYVLLSVQKFSIHVVEKCL 215
>Medtr1g094630.2 | pumilio-family RNA-binding repeatprotein | HC |
chr1:42524306-42528433 | 20130731
Length = 787
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Query: 453 VYLIAKDQHGCRFLQRVFEEGTPEDVQVIFNEIIEHVVELMINPFGNYLMQKLLEVCNEE 512
V + DQ+G RF+Q+ E + E+ IF EI+ H LM + FGNY++QK E +
Sbjct: 678 VVQFSTDQYGSRFIQQKLETASVEEKTKIFPEILPHARALMTDVFGNYVIQKFFEHGTDS 737
Query: 513 QRLQIILMVTQEPGQLVRISLNTHGTRVVQKL 544
QR ++ +T G ++ +SL +G RV+QK+
Sbjct: 738 QRKELANQLT---GHVLPLSLQMYGCRVIQKV 766
>Medtr1g051630.1 | pumilio-family RNA-binding repeatprotein | LC |
chr1:20512935-20513303 | 20130731
Length = 106
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 46/65 (70%)
Query: 528 LVRISLNTHGTRVVQKLIETLKTRQQISLVVSALEPGFLALIKDLNGNHVVQHCLQCLSN 587
+RI L+ HG+R V+KL+E + TR+Q L++SAL PG + L KD+NG+ VV +CL+ +
Sbjct: 38 FIRICLSLHGSRSVEKLLEKVTTREQRGLIMSALTPGAIVLSKDVNGHRVVFNCLKNFPH 97
Query: 588 GDNKF 592
D +F
Sbjct: 98 ADTEF 102
>Medtr5g063660.1 | hypothetical protein | LC |
chr5:26386295-26388301 | 20130731
Length = 87
Score = 58.5 bits (140), Expect = 3e-08, Method: Composition-based stats.
Identities = 26/36 (72%), Positives = 31/36 (86%)
Query: 502 MQKLLEVCNEEQRLQIILMVTQEPGQLVRISLNTHG 537
M KLLE C+++QRLQIIL +T+EP QLVR SLNTHG
Sbjct: 1 MDKLLEFCSDDQRLQIILKLTKEPNQLVRTSLNTHG 36