Miyakogusa Predicted Gene
- Lj6g3v2193590.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v2193590.1 Non Characterized Hit- tr|B9SL28|B9SL28_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,26.12,0.000000000000003, ,CUFF.60784.1
(257 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g093860.1 | transmembrane protein, putative | HC | chr4:37... 220 1e-57
Medtr5g065970.1 | transmembrane protein, putative | HC | chr5:27... 174 7e-44
Medtr3g100550.1 | peptide upstream ORF protein | LC | chr3:46246... 168 6e-42
Medtr3g031200.1 | methyltransferase | HC | chr3:26958395-2695691... 53 3e-07
Medtr4g013290.1 | methyltransferase domain protein | HC | chr4:3... 52 7e-07
Medtr7g070530.1 | methyltransferase domain protein | HC | chr7:2... 52 7e-07
>Medtr4g093860.1 | transmembrane protein, putative | HC |
chr4:37205961-37204481 | 20130731
Length = 389
Score = 220 bits (561), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 112/179 (62%), Positives = 126/179 (70%), Gaps = 7/179 (3%)
Query: 83 TKKEALKGLEDVLLEPPRQRIIKSRKYLKKIKYLPELLGDSLEGYNRRLFISAGLLSKEN 142
K AL+GLED LLEPPRQ KS K LK IKYLPELLGDSL+GY RR+F+ GL EN
Sbjct: 214 AKTTALEGLEDALLEPPRQDSAKSNKNLK-IKYLPELLGDSLDGYKRRVFVGVGL-RDEN 271
Query: 143 KGVIEWFERNYPKKDTKFEIHSLLFVPEDDN----DVSAWLSKHXXXXXXXXXXXXXXXX 198
K +EWFERNYPKK TKFEIH+L PE+ N DVSAWLSKH
Sbjct: 272 KAAVEWFERNYPKKSTKFEIHNLQVAPEEPNVPQTDVSAWLSKHVKADEYVVMKAEADVV 331
Query: 199 XXXIKERTIYLVDELFLECKNEWWQKKGKRKKSRRAYWECLALYGRLRDEGVAVHQWWG 257
++++TI LVDELFL+C N+WWQ G RKKS RAYW+CL LYGRLRDEGVAVHQWWG
Sbjct: 332 EEMMRKKTICLVDELFLQCNNQWWQT-GTRKKSGRAYWQCLDLYGRLRDEGVAVHQWWG 389
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 50/102 (49%), Gaps = 7/102 (6%)
Query: 6 HFHGGAIVLNPEAVLVIRVPDAQILRIMSRFLFMAMVLVTLP---TILRGFXXX--XXXX 60
H GG + L +A LVI+VPD + LRI SR LF+A+ V P + L+G
Sbjct: 5 HLQGGRVGLTSDAFLVIKVPDTRFLRIASRSLFLALFFVAFPFLGSFLKGLVVSGFDAIV 64
Query: 61 XXXXXXXXXXENMEQLNLVLHETKKEALKGLED--VLLEPPR 100
N+E LN +LH+ E L ED +++ PPR
Sbjct: 65 VNASTSTFVSINVEVLNSILHDLGDEGLLKKEDKALIMSPPR 106
>Medtr5g065970.1 | transmembrane protein, putative | HC |
chr5:27789153-27790764 | 20130731
Length = 419
Score = 174 bits (441), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 89/181 (49%), Positives = 114/181 (62%), Gaps = 7/181 (3%)
Query: 82 ETKKEALKGLEDVLLEPPRQRIIKSRKYLKKIKYLPELLGDSLEGYNRRLFISAGLLSKE 141
E K+ AL+ LEDVLLEPPR KSR YLK+ KYLP+L+GD+LE Y RR+FI GL K+
Sbjct: 241 EAKRAALQKLEDVLLEPPRAASGKSRVYLKRTKYLPDLMGDTLESYPRRVFIDVGLPQKD 300
Query: 142 NKGVIEWFERNYPKKDTKFEIHSLLFV----PEDDNDVSAWLSKHXXXXXXXXXXXXXXX 197
+WF +NYP ++ FE++ + V P ++S WL K+
Sbjct: 301 GGSGTDWFSKNYPTRNKNFEMYKIETVVEGSPTTQVEMSDWLMKNVKDEEYVVMKAEAEV 360
Query: 198 XXXXIKERTIYLVDELFLECKNEWWQ-KKGKRKKSRRAYWECLALYGRLRDEGVAVHQWW 256
++ ++I LVDELFLECK + K+G R RRAYWECLALYG+LRDEGVAVHQWW
Sbjct: 361 VEEMMRSKSIMLVDELFLECKPQGLNLKRGTR--GRRAYWECLALYGKLRDEGVAVHQWW 418
Query: 257 G 257
G
Sbjct: 419 G 419
>Medtr3g100550.1 | peptide upstream ORF protein | LC |
chr3:46246113-46244690 | 20130731
Length = 419
Score = 168 bits (425), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 89/187 (47%), Positives = 113/187 (60%), Gaps = 13/187 (6%)
Query: 82 ETKKEALKGLEDVLLEPPRQRIIKSRKYLKKIKYLPELLGDSLEGYNRRLFISAGLLSKE 141
+ KK AL+ LEDVLLEPPR KSRKYLK+ +YLP+L+GDSLE Y RR+FI GL KE
Sbjct: 235 DAKKIALQNLEDVLLEPPRAASGKSRKYLKRTRYLPDLMGDSLESYTRRVFIDVGLPEKE 294
Query: 142 NKGVIEWFERNYPKKDTKFEIHSL---LFVPEDDN--------DVSAWLSKHXXXXXXXX 190
+WF +NYP ++ FE++ + + E+ + +S WL+K+
Sbjct: 295 GGSGTDWFSKNYPTRNKNFEMYKIETRVMTEEESSRKEASSKIGMSDWLNKNVKEEEYVV 354
Query: 191 XXXXXXXXXXXIKERTIYLVDELFLECKNEWWQKKGKRKKSRRAYWECLALYGRLRDEGV 250
++ I LVDELFLECK K K+RRAYWECLALYG+LRDEGV
Sbjct: 355 MKAEAEVVEEMMRSNNIGLVDELFLECKPRHGFK--IENKNRRAYWECLALYGKLRDEGV 412
Query: 251 AVHQWWG 257
AVHQWWG
Sbjct: 413 AVHQWWG 419
>Medtr3g031200.1 | methyltransferase | HC | chr3:26958395-26956911 |
20130731
Length = 494
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 36/57 (63%), Gaps = 3/57 (5%)
Query: 202 IKERTIYLVDELFLECKNEWWQK--KGKRK-KSRRAYWECLALYGRLRDEGVAVHQW 255
I+ I L+DELFLEC WQ+ G+R K ++ Y +CL L+ LR+ GV VHQW
Sbjct: 437 IQTGAICLIDELFLECHYNRWQRCCPGQRSAKFQKTYSQCLDLFTSLRNIGVLVHQW 493
>Medtr4g013290.1 | methyltransferase domain protein | HC |
chr4:3695664-3697901 | 20130731
Length = 509
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 206 TIYLVDELFLECKNEWWQK--KGKRK-KSRRAYWECLALYGRLRDEGVAVHQWW 256
I LVDE+FLEC WQ+ G+R K + Y +CL L+ LR GV VHQW+
Sbjct: 456 AICLVDEIFLECHYNRWQRCCPGQRSPKYEKTYDQCLQLFNSLRQSGVLVHQWF 509
>Medtr7g070530.1 | methyltransferase domain protein | HC |
chr7:26047730-26045559 | 20130731
Length = 509
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 202 IKERTIYLVDELFLECKNEWWQK--KGKRK-KSRRAYWECLALYGRLRDEGVAVHQWW 256
K I L+DE+FLEC WQ+ G+R K + Y +CL L+ LR G+ VHQW+
Sbjct: 452 FKTGAICLIDEIFLECHYNRWQRCCPGQRSSKYEKTYDQCLELFNSLRQSGILVHQWF 509