Miyakogusa Predicted Gene

Lj6g3v2193440.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2193440.1 Non Characterized Hit- tr|Q2HVA4|Q2HVA4_MEDTR
Centromere protein, putative OS=Medicago truncatula GN,67.28,0,BHLH
FAMILY PROTEIN,NULL; STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY
MEMBER,NULL; seg,NULL; Pr,CUFF.60866.1
         (918 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g009620.1 | viral A-type inclusion protein, putative | HC ...  1029   0.0  
Medtr2g009620.2 | viral A-type inclusion protein, putative | HC ...  1029   0.0  
Medtr8g471150.1 | basic helix loop helix protein, putative | HC ...   252   1e-66
Medtr5g032080.1 | viral A-type inclusion protein, putative | HC ...   136   1e-31

>Medtr2g009620.1 | viral A-type inclusion protein, putative | HC |
           chr2:1985911-1981880 | 20130731
          Length = 909

 Score = 1029 bits (2660), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 567/920 (61%), Positives = 679/920 (73%), Gaps = 20/920 (2%)

Query: 5   SAAAELEDVRAEVEKLRAECRAKTKLLESLKKDRGEEIVKFQEATKLAEKHARELDRKSE 64
           S+  +L+  +AE+EKLRAECR KT+ +ESLK DR       +E T LAEKHARELD KSE
Sbjct: 4   SSHTDLDYAKAELEKLRAECRVKTQQIESLKNDRA------RETTNLAEKHARELDLKSE 57

Query: 65  EIQELRKIQEDLKCDLQEKEACIAHLSSENRKIQGNCAERLVTLEGSNRKMVVALDELTA 124
           EI EL++I EDL+  L+EKE  I HL+SEN KI+   AER+  LEGSN ++V+ LDE+TA
Sbjct: 58  EIYELKRINEDLESSLREKEKYIVHLNSENNKIEARFAERVFKLEGSNSELVLTLDEITA 117

Query: 125 RNNDLEQNACASSGEISRXXXXXXXXXXXXXXXXXXXRQAVILRRREDVILQLEEENMSV 184
           RN+ LE+N C SS E+SR                   +QA  ++ +EDVI+QLEEEN++V
Sbjct: 118 RNSCLEKNVCESSEEVSRLKSSLLAAEKKCIEAEERAKQAKTMKLKEDVIMQLEEENVTV 177

Query: 185 QDKIKWRNEQFKHLEEAHEQLQVQFQXXXXXXXXXXXALLDEMSSLQTSLDSQTRTLEGL 244
           QDKIKWRNEQFKHLEEA++ L+ QFQ            L+ E+SSLQ SL+SQTRTLEGL
Sbjct: 178 QDKIKWRNEQFKHLEEAYQHLKDQFQLSKEEWEKERSLLVGEISSLQMSLNSQTRTLEGL 237

Query: 245 QSRLEMCNHALAHEESKRKLMEAEIRELKTCFDDVYSQCEEKKTEVQELTAMRNDEIASL 304
           QSR EMCNHALA EESKRKL+EAEI E KT F+DVY QCEEKK E++ELT  RNDEIA L
Sbjct: 238 QSRFEMCNHALACEESKRKLLEAEISEFKTSFEDVYGQCEEKKFEIEELTVRRNDEIAEL 297

Query: 305 RNSLGEKEMLVRELERKIVLLEQDNQELGDSVKELREAQIQNGGANSLTSKLRNKLRRLE 364
           RNSL EKE+LV+ELERKIVLLEQDNQE+GD +KE REAQI+  G NS+TSKLRNKLR+LE
Sbjct: 298 RNSLAEKEILVKELERKIVLLEQDNQEVGDLLKEFREAQIRGAGGNSMTSKLRNKLRKLE 357

Query: 365 ETHKGCSSILKSKESQWDSQVAKMEADIIAYKSTLTNKEQEIRELQMELETCYHAIADNH 424
           E HK CSS+LKSKESQWD QVAKMEAD+I Y+S LTNKEQEIRELQ+ELE CY AI +NH
Sbjct: 358 EVHKNCSSVLKSKESQWDCQVAKMEADVIGYQSALTNKEQEIRELQIELENCYCAIEENH 417

Query: 425 MELLIFKSEL--AEAHSKSFTAETENAVRFKEKENMILFSTEQLRVKDNSLTTTVWQHXX 482
           +ELLIFKS L  A+A+SKSF  ET  AV  +E  + IL  +EQLR+KDNSL T   +   
Sbjct: 418 IELLIFKSVLAVADAYSKSFGTETGKAVCVEENGDTILNFSEQLRLKDNSLKTMAQKQFL 477

Query: 483 XXXXXXXXXXMLEESSAGQLILKEQLLQMESTLQHXXXXXXXXXXXXXXXXXNKNDELSR 542
                      LEESSAGQLILKEQLLQME+TL+H                 +KNDELSR
Sbjct: 478 LEEEFEHQKKCLEESSAGQLILKEQLLQMENTLKHERKVSFEALEMLKHEMASKNDELSR 537

Query: 543 LDCEAQSWKSTAETLRGSYEEIQGSCEKMETSLQSQIENEQALKQENENLLCIVKDKDRK 602
           LDCEA+ WKST ETLR SY+EIQG+C++METSL S+  NEQALK EN+NLLCIVKD++R 
Sbjct: 538 LDCEARHWKSTVETLRVSYQEIQGTCKEMETSLLSRDANEQALKLENKNLLCIVKDQERD 597

Query: 603 IEDLQRQISSLELCNAEIMKEAEKCKQEKDGLVQIALEKDCCIKDLQKDIAIADLKQESL 662
            EDLQ QI+ LE CNAE  KEAE+ KQEKD LVQ  +EKDCCIKDL+KDIA+A LKQES+
Sbjct: 598 TEDLQLQIALLESCNAEKAKEAERFKQEKDELVQTMMEKDCCIKDLEKDIAVASLKQESI 657

Query: 663 KEKLEDAIVAKMXXXXXXXXXXXXX-XXXXXXNQTLKHFQKLATTMEHDLSDAMYFSFSN 721
           K++LEDA++A++                    ++T+KHFQ+LA   E D  +A+ FSFS 
Sbjct: 658 KKELEDAVLAQLDAQKALQQEEDLLWKIKDEKDETIKHFQELAKASEQDFLEALCFSFSI 717

Query: 722 QVEKLVEVSALNEALKNAEYLTKLEIEEKNMRIVKSELEINSLLDNLAHTKESFFHLKHE 781
           QVEKLVEVS + EALKNAEYLTKLEIEEK+ RI+KSELEI SLL+NLA T+ES+ HLKHE
Sbjct: 718 QVEKLVEVSMVTEALKNAEYLTKLEIEEKSTRIIKSELEIKSLLENLAQTEESYCHLKHE 777

Query: 782 AEQLQTSLEAMKFETEKLTDKQQTMEYMITELNSEKESLLQDIKKLSGEREGMLAYIEDL 841
           A+Q Q SLEAM+ ET+KLT+++Q ME MI E+  E  +LL DI KLS ERE MLA+IE +
Sbjct: 778 AKQFQLSLEAMELETKKLTNEKQKMEQMIAEIKFENGNLLLDITKLSTEREDMLAHIEYI 837

Query: 842 CDRIGELSSGDMQLMERLGKILNTSVD-ENETAMDSVIGD--HDCPRDNANSLLFPTTNK 898
             +IG+LSS DMQ         NTS+D ENETAMDSV+ D  H   +D+AN LLFP TNK
Sbjct: 838 YGKIGDLSSEDMQ--------FNTSIDEENETAMDSVVCDKLHGSAQDSANGLLFPCTNK 889

Query: 899 KFEESFGERSPLAEVNSLHM 918
           K EE+F  R PL EVNSLHM
Sbjct: 890 KIEENFDGRLPLREVNSLHM 909


>Medtr2g009620.2 | viral A-type inclusion protein, putative | HC |
           chr2:1985974-1981800 | 20130731
          Length = 909

 Score = 1029 bits (2660), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 567/920 (61%), Positives = 679/920 (73%), Gaps = 20/920 (2%)

Query: 5   SAAAELEDVRAEVEKLRAECRAKTKLLESLKKDRGEEIVKFQEATKLAEKHARELDRKSE 64
           S+  +L+  +AE+EKLRAECR KT+ +ESLK DR       +E T LAEKHARELD KSE
Sbjct: 4   SSHTDLDYAKAELEKLRAECRVKTQQIESLKNDRA------RETTNLAEKHARELDLKSE 57

Query: 65  EIQELRKIQEDLKCDLQEKEACIAHLSSENRKIQGNCAERLVTLEGSNRKMVVALDELTA 124
           EI EL++I EDL+  L+EKE  I HL+SEN KI+   AER+  LEGSN ++V+ LDE+TA
Sbjct: 58  EIYELKRINEDLESSLREKEKYIVHLNSENNKIEARFAERVFKLEGSNSELVLTLDEITA 117

Query: 125 RNNDLEQNACASSGEISRXXXXXXXXXXXXXXXXXXXRQAVILRRREDVILQLEEENMSV 184
           RN+ LE+N C SS E+SR                   +QA  ++ +EDVI+QLEEEN++V
Sbjct: 118 RNSCLEKNVCESSEEVSRLKSSLLAAEKKCIEAEERAKQAKTMKLKEDVIMQLEEENVTV 177

Query: 185 QDKIKWRNEQFKHLEEAHEQLQVQFQXXXXXXXXXXXALLDEMSSLQTSLDSQTRTLEGL 244
           QDKIKWRNEQFKHLEEA++ L+ QFQ            L+ E+SSLQ SL+SQTRTLEGL
Sbjct: 178 QDKIKWRNEQFKHLEEAYQHLKDQFQLSKEEWEKERSLLVGEISSLQMSLNSQTRTLEGL 237

Query: 245 QSRLEMCNHALAHEESKRKLMEAEIRELKTCFDDVYSQCEEKKTEVQELTAMRNDEIASL 304
           QSR EMCNHALA EESKRKL+EAEI E KT F+DVY QCEEKK E++ELT  RNDEIA L
Sbjct: 238 QSRFEMCNHALACEESKRKLLEAEISEFKTSFEDVYGQCEEKKFEIEELTVRRNDEIAEL 297

Query: 305 RNSLGEKEMLVRELERKIVLLEQDNQELGDSVKELREAQIQNGGANSLTSKLRNKLRRLE 364
           RNSL EKE+LV+ELERKIVLLEQDNQE+GD +KE REAQI+  G NS+TSKLRNKLR+LE
Sbjct: 298 RNSLAEKEILVKELERKIVLLEQDNQEVGDLLKEFREAQIRGAGGNSMTSKLRNKLRKLE 357

Query: 365 ETHKGCSSILKSKESQWDSQVAKMEADIIAYKSTLTNKEQEIRELQMELETCYHAIADNH 424
           E HK CSS+LKSKESQWD QVAKMEAD+I Y+S LTNKEQEIRELQ+ELE CY AI +NH
Sbjct: 358 EVHKNCSSVLKSKESQWDCQVAKMEADVIGYQSALTNKEQEIRELQIELENCYCAIEENH 417

Query: 425 MELLIFKSEL--AEAHSKSFTAETENAVRFKEKENMILFSTEQLRVKDNSLTTTVWQHXX 482
           +ELLIFKS L  A+A+SKSF  ET  AV  +E  + IL  +EQLR+KDNSL T   +   
Sbjct: 418 IELLIFKSVLAVADAYSKSFGTETGKAVCVEENGDTILNFSEQLRLKDNSLKTMAQKQFL 477

Query: 483 XXXXXXXXXXMLEESSAGQLILKEQLLQMESTLQHXXXXXXXXXXXXXXXXXNKNDELSR 542
                      LEESSAGQLILKEQLLQME+TL+H                 +KNDELSR
Sbjct: 478 LEEEFEHQKKCLEESSAGQLILKEQLLQMENTLKHERKVSFEALEMLKHEMASKNDELSR 537

Query: 543 LDCEAQSWKSTAETLRGSYEEIQGSCEKMETSLQSQIENEQALKQENENLLCIVKDKDRK 602
           LDCEA+ WKST ETLR SY+EIQG+C++METSL S+  NEQALK EN+NLLCIVKD++R 
Sbjct: 538 LDCEARHWKSTVETLRVSYQEIQGTCKEMETSLLSRDANEQALKLENKNLLCIVKDQERD 597

Query: 603 IEDLQRQISSLELCNAEIMKEAEKCKQEKDGLVQIALEKDCCIKDLQKDIAIADLKQESL 662
            EDLQ QI+ LE CNAE  KEAE+ KQEKD LVQ  +EKDCCIKDL+KDIA+A LKQES+
Sbjct: 598 TEDLQLQIALLESCNAEKAKEAERFKQEKDELVQTMMEKDCCIKDLEKDIAVASLKQESI 657

Query: 663 KEKLEDAIVAKMXXXXXXXXXXXXX-XXXXXXNQTLKHFQKLATTMEHDLSDAMYFSFSN 721
           K++LEDA++A++                    ++T+KHFQ+LA   E D  +A+ FSFS 
Sbjct: 658 KKELEDAVLAQLDAQKALQQEEDLLWKIKDEKDETIKHFQELAKASEQDFLEALCFSFSI 717

Query: 722 QVEKLVEVSALNEALKNAEYLTKLEIEEKNMRIVKSELEINSLLDNLAHTKESFFHLKHE 781
           QVEKLVEVS + EALKNAEYLTKLEIEEK+ RI+KSELEI SLL+NLA T+ES+ HLKHE
Sbjct: 718 QVEKLVEVSMVTEALKNAEYLTKLEIEEKSTRIIKSELEIKSLLENLAQTEESYCHLKHE 777

Query: 782 AEQLQTSLEAMKFETEKLTDKQQTMEYMITELNSEKESLLQDIKKLSGEREGMLAYIEDL 841
           A+Q Q SLEAM+ ET+KLT+++Q ME MI E+  E  +LL DI KLS ERE MLA+IE +
Sbjct: 778 AKQFQLSLEAMELETKKLTNEKQKMEQMIAEIKFENGNLLLDITKLSTEREDMLAHIEYI 837

Query: 842 CDRIGELSSGDMQLMERLGKILNTSVD-ENETAMDSVIGD--HDCPRDNANSLLFPTTNK 898
             +IG+LSS DMQ         NTS+D ENETAMDSV+ D  H   +D+AN LLFP TNK
Sbjct: 838 YGKIGDLSSEDMQ--------FNTSIDEENETAMDSVVCDKLHGSAQDSANGLLFPCTNK 889

Query: 899 KFEESFGERSPLAEVNSLHM 918
           K EE+F  R PL EVNSLHM
Sbjct: 890 KIEENFDGRLPLREVNSLHM 909


>Medtr8g471150.1 | basic helix loop helix protein, putative | HC |
           chr8:28762436-28766018 | 20130731
          Length = 767

 Score =  252 bits (644), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 168/475 (35%), Positives = 279/475 (58%), Gaps = 8/475 (1%)

Query: 9   ELEDVRAEVEKLRAECRAKTKLLESLKKDRGEEIVKFQEATKLAEKHARELDRKSEEIQE 68
           EL++ ++E++KL+AE RAK+  LE+LK+    ++ + QEA   +EK  +EL +K++EI E
Sbjct: 7   ELDEAKSEIDKLKAELRAKSDSLENLKRSLNAQVNQTQEAKSKSEKLDQELLQKADEIAE 66

Query: 69  LRKIQEDLKCDLQEKEACIAHLSSENRKIQGNCAERLVTLEGSNRKMVVALDELTARNND 128
            + + E LK +L+E+E+ I HL + N K++ +  E++   E   R +V+AL+E   +  +
Sbjct: 67  AKSLYESLKGNLKEQESIIKHLKAANDKLRVDFDEKIKMWENEKRGLVLALEEANDKAEN 126

Query: 129 LEQNACASSGEISRXXXXXXXXXXXXXXXXXXXRQAVILRRREDVILQLEEENMSVQDKI 188
            +Q  C    EI                     + +  L  R+ +  +LEEE + ++D++
Sbjct: 127 QDQQVCRYRKEIESLKSCLSVSKQKCSESQKKLKSSKELSERDGMFQKLEEEKVKLEDQL 186

Query: 189 KWRNEQFKHLEEAHEQLQVQFQXXXXXXXXXXXALLDEMSSLQTSLDSQTRTLEGLQSRL 248
           KW+ EQFKHLEEA+E+L+ QF+            LLDE+SSL+T L+SQ R  E LQ +L
Sbjct: 187 KWKKEQFKHLEEAYEKLKGQFKSSKKEWEMEKSTLLDEISSLETKLESQIRISEDLQHQL 246

Query: 249 EMCNHALAHEESKRKLMEAEIRELKTCFDDVYSQCEEKKTEVQELTAMRNDEIASLRNSL 308
           + C+ ALAH ES++K +E E+ + +   D+  S+  + + ++  L + R+ +I  LR SL
Sbjct: 247 QTCHQALAHVESQKKRLEVEVSDFRLQLDNAGSEYHDARLQLDCLNSDRDKDIVDLRYSL 306

Query: 309 GEKEMLVRELERKIVLLEQDNQELGDSVKELREAQIQNGGANSLTSKLRNKLRRLEETHK 368
             KE  ++E + ++  LEQ+NQEL  S++EL+E+QIQ G   S  SKLR KL+ LE+THK
Sbjct: 307 KTKEAHIKEAKYQMEKLEQENQELRMSLRELQESQIQAGAYYS-QSKLRTKLKNLEQTHK 365

Query: 369 GCSSILKSKESQWDSQVAKMEADIIAYKSTLTNKEQEIRELQMELETCYHAIADNHM--- 425
            C+  LK++E++WDS++ ++   +   +S L  K   + ELQMELE+ +  + +  +   
Sbjct: 366 ECALTLKAREAEWDSRIEQLTGQLNTCQSELEAKIAAVEELQMELESSHLIVVETRLLNE 425

Query: 426 ----ELLIFKSELAEAHSKSFTAETENAVRFKEKENMILFSTEQLRVKDNSLTTT 476
                LL+ K  ++EA  +    + E  +  KEKE  I    +QL +KD+SL + 
Sbjct: 426 EMSVMLLVLKQGISEAQLRLANYKDEMDLLNKEKEREIFQLMKQLEMKDDSLISA 480


>Medtr5g032080.1 | viral A-type inclusion protein, putative | HC |
           chr5:13767234-13769396 | 20130731
          Length = 720

 Score =  136 bits (342), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 175/707 (24%), Positives = 328/707 (46%), Gaps = 111/707 (15%)

Query: 222 ALLDEMSSLQTSLDSQTRTLEGLQSRLEMCNHALAHEESKRKLMEAEIRELKTCFDDVYS 281
            LLDE+S L++ LDS  +  + LQ +L MC   LAHEES+RK +E E+ +LK+  + + S
Sbjct: 109 TLLDEISFLKSKLDSHIKVSQDLQHQLHMCKQLLAHEESQRKSIEVEVLDLKSKSEGLNS 168

Query: 282 QCEEKKTEVQELTAMRNDEIASLRNSLGEKEMLVRELERKIVLLEQDNQELGDSVKELRE 341
           Q              ++ +I  LR +L  +E+  +E +     LEQ+NQ+L  S++EL+E
Sbjct: 169 Q--------------KDKDIEDLRKALKIQEVYYKESKYSNEKLEQENQQLRKSLRELQE 214

Query: 342 AQIQNGGANSLTSKLRNKLRRLEETHKGCSSILKSKESQWDSQVAKMEADIIAYKSTLTN 401
           +  Q+  A+   S LR+ LR L++TH+ C  I K+++ +W  Q+ +M  +I  Y+  L  
Sbjct: 215 S--QDARASYSISMLRSNLRGLQKTHRECVKIFKARQVEWSFQLEQMSDNIDNYRYALEV 272

Query: 402 KEQEIRELQMELETCYHAIADNHMELLIFKSELAEAHSKSFTAETENAVRFKEKENMILF 461
           K   I +L+ ELE C  +    ++E+++   E+       F               M+L 
Sbjct: 273 KAATIEKLKKELE-CSQSF---NIEMMLLNEEM-------FV--------------MLLV 307

Query: 462 STEQLRVKDNSLTTTVWQHXXXXXXXXXXXXMLEESS--AGQLILKEQLLQMESTLQHXX 519
             E +   +    +   +H            MLEES+    ++ LKEQL ++ + L    
Sbjct: 308 LKEGISEHNELQNSQRKEH-------NIHKDMLEESTKCKTKMDLKEQLFEVYNALD--- 357

Query: 520 XXXXXXXXXXXXXXXNKNDELSRLDCEAQSWKSTAETLRGSYEEIQGSCEKMETSLQSQI 579
                          ++  E+S ++ E Q WKS  ++L+   EE +   + +E SL +Q+
Sbjct: 358 --------KPNIELDDRTCEISEMEFELQMWKSFVKSLKNDLEESRVMRKALENSLLAQV 409

Query: 580 ENEQALKQENENLLCIVKDKDRKIEDLQRQISSLELCNAEIMKEAEKCKQEKDGLVQIAL 639
           +    LKQ+ ++L   +++++ KI  LQ  +  LE    E   +A + +Q +     + +
Sbjct: 410 DFNVRLKQKIDSLEHKLEEEENKINYLQLHLFVLEQALKERDAKASEPEQFRREFDSVVI 469

Query: 640 EKDCCIK---DLQKDIAIADLKQESLKEKLEDAIVAKMXXXXXXXXXXXXXXXXXXXNQT 696
           EK C ++   + +K+I I                                       N  
Sbjct: 470 EK-CNVERTNEFEKEIPIKG------------------------------------KNMA 492

Query: 697 LKHFQKLATTMEHDLSDAMYFSFSNQVEK---LVEVSALNEALKNAEYLTKLEIEEKNMR 753
                K  T+++ +   ++    S  +EK   +++V  + + +  AE L  +E EEK + 
Sbjct: 493 KNELMKYVTSLKKEFISSLIPFNSQLMEKHAEIIQVQEVCDKITEAEALAIIEFEEKKLM 552

Query: 754 IVKSELEINSLLDNLAHTKESFFHLKHEAEQLQTSLEAMKFETEKLTD----KQQTMEYM 809
           I + E +IN + + L   +E+   LK  A  ++  ++A + + ++L D    K +  + +
Sbjct: 553 IEELEDDINDMENKLKLQEENLSQLKLLACDIEMEIDAKQLKIKQLNDHLENKLRGSDVL 612

Query: 810 ITELNSEKESLLQDIKKLSGEREGMLAYIEDLCDRIGELSSGDMQLMERLGKILNTSVDE 869
           + ++  E  SLL +  +LS ERE +L++I  L D++ + ++ D  L+  L  ++ +   E
Sbjct: 613 LQKIKIENRSLLDNGARLSLERENLLSFIMGLGDKMNDCTTADTNLVHVLRSLVQSFEKE 672

Query: 870 NETAMDSVIGDHDCPRDNANSLLFPTTNKKFEESFGE-RSPLAEVNS 915
               M+  + + D      N ++   T     ES  + RSP  E+++
Sbjct: 673 CVGGMN--LKNDDGLFVKENMIVHSPTGLNKPESLSDIRSPFVELDN 717