Miyakogusa Predicted Gene

Lj6g3v2193390.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2193390.1 Non Characterized Hit- tr|K4BU53|K4BU53_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,50.91,5e-19,seg,NULL,
NODE_55984_length_954_cov_23.761005.path2.1
         (194 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g093860.1 | transmembrane protein, putative | HC | chr4:37...   150   9e-37
Medtr3g100550.1 | peptide upstream ORF protein | LC | chr3:46246...   119   1e-27
Medtr5g065970.1 | transmembrane protein, putative | HC | chr5:27...   119   1e-27

>Medtr4g093860.1 | transmembrane protein, putative | HC |
           chr4:37205961-37204481 | 20130731
          Length = 389

 Score =  150 bits (378), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 79/116 (68%), Positives = 87/116 (75%), Gaps = 6/116 (5%)

Query: 83  TKKEALKGLEDVLLEPPRQRIIKSRKYLKKIKYLPELLGDSLEGYNRRLFISAGLLSKEN 142
            K  AL+GLED LLEPPRQ   KS K LK IKYLPELLGDSL+GY RR+F+  GL   EN
Sbjct: 214 AKTTALEGLEDALLEPPRQDSAKSNKNLK-IKYLPELLGDSLDGYKRRVFVGVGL-RDEN 271

Query: 143 KGVIEWFERNYAKKDTKFEIHSLLFVPEDDN----DVSAWLSKHVKEEEYVVMKAE 194
           K  +EWFERNY KK TKFEIH+L   PE+ N    DVSAWLSKHVK +EYVVMKAE
Sbjct: 272 KAAVEWFERNYPKKSTKFEIHNLQVAPEEPNVPQTDVSAWLSKHVKADEYVVMKAE 327



 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 50/102 (49%), Gaps = 7/102 (6%)

Query: 6   HFHGGAIVLNPEAVLVIRVPDAQILRIMSRFLFMAMVLVTLP---TILRGFXXX--XXXX 60
           H  GG + L  +A LVI+VPD + LRI SR LF+A+  V  P   + L+G          
Sbjct: 5   HLQGGRVGLTSDAFLVIKVPDTRFLRIASRSLFLALFFVAFPFLGSFLKGLVVSGFDAIV 64

Query: 61  XXXXXXXXXXENMEQLNLVLHETKKEALKGLED--VLLEPPR 100
                      N+E LN +LH+   E L   ED  +++ PPR
Sbjct: 65  VNASTSTFVSINVEVLNSILHDLGDEGLLKKEDKALIMSPPR 106


>Medtr3g100550.1 | peptide upstream ORF protein | LC |
           chr3:46246113-46244690 | 20130731
          Length = 419

 Score =  119 bits (299), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 62/124 (50%), Positives = 82/124 (66%), Gaps = 11/124 (8%)

Query: 82  ETKKEALKGLEDVLLEPPRQRIIKSRKYLKKIKYLPELLGDSLEGYNRRLFISAGLLSKE 141
           + KK AL+ LEDVLLEPPR    KSRKYLK+ +YLP+L+GDSLE Y RR+FI  GL  KE
Sbjct: 235 DAKKIALQNLEDVLLEPPRAASGKSRKYLKRTRYLPDLMGDSLESYTRRVFIDVGLPEKE 294

Query: 142 NKGVIEWFERNYAKKDTKFEIHSL---LFVPEDDN--------DVSAWLSKHVKEEEYVV 190
                +WF +NY  ++  FE++ +   +   E+ +         +S WL+K+VKEEEYVV
Sbjct: 295 GGSGTDWFSKNYPTRNKNFEMYKIETRVMTEEESSRKEASSKIGMSDWLNKNVKEEEYVV 354

Query: 191 MKAE 194
           MKAE
Sbjct: 355 MKAE 358


>Medtr5g065970.1 | transmembrane protein, putative | HC |
           chr5:27789153-27790764 | 20130731
          Length = 419

 Score =  119 bits (299), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 60/117 (51%), Positives = 79/117 (67%), Gaps = 4/117 (3%)

Query: 82  ETKKEALKGLEDVLLEPPRQRIIKSRKYLKKIKYLPELLGDSLEGYNRRLFISAGLLSKE 141
           E K+ AL+ LEDVLLEPPR    KSR YLK+ KYLP+L+GD+LE Y RR+FI  GL  K+
Sbjct: 241 EAKRAALQKLEDVLLEPPRAASGKSRVYLKRTKYLPDLMGDTLESYPRRVFIDVGLPQKD 300

Query: 142 NKGVIEWFERNYAKKDTKFEIHSLLFV----PEDDNDVSAWLSKHVKEEEYVVMKAE 194
                +WF +NY  ++  FE++ +  V    P    ++S WL K+VK+EEYVVMKAE
Sbjct: 301 GGSGTDWFSKNYPTRNKNFEMYKIETVVEGSPTTQVEMSDWLMKNVKDEEYVVMKAE 357