Miyakogusa Predicted Gene

Lj6g3v2192110.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2192110.1 Non Characterized Hit- tr|A7UQS8|A7UQS8_MEDTR
Metal ion transporter , putative OS=Medicago truncatul,85.19,0,no
description,NULL; coiled-coil,NULL; seg,NULL; CorA,Mg2+ transporter
protein, CorA-like/Zinc trans,CUFF.60756.1
         (465 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g010000.1 | magnesium transporter CorA family protein | HC...   738   0.0  

>Medtr2g010000.1 | magnesium transporter CorA family protein | HC |
           chr2:2188652-2184119 | 20130731
          Length = 466

 Score =  738 bits (1905), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/466 (78%), Positives = 389/466 (83%), Gaps = 1/466 (0%)

Query: 1   MELAQR-RVLENGXXXXXXXXXXXXXHRIYHSHPASFVKKRAYVFDGLGNFYNKDWDLAY 59
           MELA R RV+ENG             HR Y SHP   VKKRAY+FDG GNFYNK+WDLA 
Sbjct: 1   MELASRHRVMENGGAEEMDVENPVDEHRFYPSHPVGLVKKRAYIFDGSGNFYNKEWDLAD 60

Query: 60  LYKKDERETVGVEGRENEFSWYHVELPKGNQKLSQSAQDLIGVLCPPLKLQDILSLVSNG 119
           LY+K+E+E+  VEGR NEFSWYHVELPKGNQKLSQSAQDLIGVLCPPLKLQDILSLVSNG
Sbjct: 61  LYQKEEKESDAVEGRGNEFSWYHVELPKGNQKLSQSAQDLIGVLCPPLKLQDILSLVSNG 120

Query: 120 PFCAYVDGALVFRVNSPGPPSSDFTFRIAARVTENSVITVSLGRVPRLGFSRMGESLLSE 179
           PFCA+VDGALVFRVNSPGPPSSDFTFR+AARVTENSVITVSLGRVPRLGFSRMGESLLSE
Sbjct: 121 PFCAHVDGALVFRVNSPGPPSSDFTFRLAARVTENSVITVSLGRVPRLGFSRMGESLLSE 180

Query: 180 IPSVESSSNFRGQQKEKSGTVIKEHVLEFLLTMNHSEEADNPVPRSVPKLVVHIIDTHVD 239
           IP VESSS F GQQ+E SGTVIKEHVLEFLLTMNHSEEADNPVPRSV  LVVHIIDTHVD
Sbjct: 181 IPRVESSSRFSGQQREGSGTVIKEHVLEFLLTMNHSEEADNPVPRSVSNLVVHIIDTHVD 240

Query: 240 QLQDIVTKLEIELDSVELDLDKGGYALKKQMLDDRRFPKLHINLQRLLQVIGHGEQVYLR 299
           QLQD+VTKLE+ELDSVELDLDKGGYALKKQMLDDRRFPK+HINLQRLLQVI HGEQVYLR
Sbjct: 241 QLQDLVTKLEMELDSVELDLDKGGYALKKQMLDDRRFPKIHINLQRLLQVIAHGEQVYLR 300

Query: 300 VKEKCSSRRWFPNEDINTLDELIGRLRRMKENVGFIVNRVTAIQAGLDSWQSEQINRKLY 359
           VKEK SS+RW   EDIN+L+ELIGRLRR+KENVGFIVNRVTAIQA LDSWQSEQINRKLY
Sbjct: 301 VKEKSSSKRWLSIEDINSLEELIGRLRRLKENVGFIVNRVTAIQASLDSWQSEQINRKLY 360

Query: 360 YXXXXXXXXXXXXXXTGVFGMNVGGVPWTGQNAPALKDGFRNXXXXXXXXXXXXXXXXIF 419
           Y              TGVFGMNVGGVPWTGQN+P LKDGFRN                +F
Sbjct: 361 YLSFLSIVFLPLSIITGVFGMNVGGVPWTGQNSPELKDGFRNVMLVCVIMLVLVLLCFLF 420

Query: 420 PALYSHVAAAWRTKRVLGRNWSFNKKSLLRRSLRTEDSQRGGYLRI 465
           PALY+ +  AWR K+ LGRNWS NKKSLLRR LR +D+ RGGYLRI
Sbjct: 421 PALYTRIVTAWREKKTLGRNWSLNKKSLLRRPLRIDDTARGGYLRI 466