Miyakogusa Predicted Gene

Lj6g3v2192080.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2192080.1 Non Characterized Hit- tr|I1M2K6|I1M2K6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.19244
PE,80.3,0,seg,NULL; PREDICTED: HYPOTHETICAL PROTEIN, PARTIAL,NULL; DNA
POLYMERASE V RELATED,DNA polymerase V; ,CUFF.60755.1
         (1260 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g010110.1 | DNA polymerase V-like protein, putative | HC |...  1623   0.0  
Medtr2g086320.1 | DNA polymerase V-like protein, putative | HC |...   108   3e-23

>Medtr2g010110.1 | DNA polymerase V-like protein, putative | HC |
            chr2:2226055-2233725 | 20130731
          Length = 1258

 Score = 1623 bits (4202), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 870/1276 (68%), Positives = 959/1276 (75%), Gaps = 39/1276 (3%)

Query: 1    MASKKRNSVPEEENATDS--PKPLNKKSKNID-AVALPSSTKP-MESKKKRKALDKERRR 56
            M SKKRN      NA DS   +PLNKKSKN D + A PSSTKP ME+ KK KA DK+RR 
Sbjct: 1    MGSKKRN------NAIDSQEKEPLNKKSKNNDDSTATPSSTKPTMENHKKSKAFDKQRRS 54

Query: 57   ATAGEVVPEPKPVAAADSPSTSGGSAA----PEFHIGVFKDLAVANETMREAAAKQMVRE 112
            A +      P P +A    STSGG +     PEFHIGVFKDLA  NE++REAA KQMV E
Sbjct: 55   AKSKSKSELPAPDSAILVDSTSGGGSGVDSLPEFHIGVFKDLAAVNESVREAAVKQMVNE 114

Query: 113  LKEVQNAYDGLGESEKEEGDGGFKLEAEKDDGLENCAASVRYAVRRLIRGVSSSRECARP 172
            LKEVQ AY+G G+  + +GDGGFKLEAEK+DGL+ CA SVRYA RRLIRGVSSSRECAR 
Sbjct: 115  LKEVQKAYEG-GQGMEIDGDGGFKLEAEKNDGLDECAPSVRYAFRRLIRGVSSSRECARQ 173

Query: 173  GFALGLAALVGSIHNIRVESFLKLVVDLLEVTSSMKGQEAKDSLLGRLFAYGALARSGRL 232
            GFALGL  L G+I  IRV+SFLKLVVDLLEVTSSMKGQEAKD LLGRLFAYGALARSGRL
Sbjct: 174  GFALGLTLLAGAISKIRVDSFLKLVVDLLEVTSSMKGQEAKDCLLGRLFAYGALARSGRL 233

Query: 233  EHEYSSDKNTSSIKEFISALISLANRKRYLQDPAVSIILDLVEKLPVEALVNHVMEAPGL 292
             HE+S DKNT  IKEF+  LISLANRKRYLQ+PAVSIIL LVEKLPVEAL NHV+EAPGL
Sbjct: 234  IHEWSMDKNTPYIKEFVGILISLANRKRYLQEPAVSIILYLVEKLPVEALANHVIEAPGL 293

Query: 293  QEWFEAAVEVGNPDALLLALKVREKISIDSSRFGKLLPNPFSSSQLFSADHLSSLSNCLK 352
             +WFE+A EVGNPDAL LALKVREKIS DSS +GKLLPNPFSS+  FSADHLS LSNCLK
Sbjct: 294  DKWFESAAEVGNPDALFLALKVREKISADSSIYGKLLPNPFSSTNFFSADHLSFLSNCLK 353

Query: 353  ESTFCQPRVHGVWPALINILLPN-VSQLEDXXXXXXXXXXXXXXXXXXXXDEEIVKSLQS 411
            ESTFCQPRVH +WP LINIL+PN V QLED                    DEEIVK+L+S
Sbjct: 354  ESTFCQPRVHSIWPVLINILIPNTVPQLEDAASASNSLKKHKKSRKSCSSDEEIVKNLKS 413

Query: 412  FCEIIIEGSLLFSSHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQCLMDVLSTKSSWL 471
            FCEIIIEGSLLFSSH                               QCLMD+LSTK++WL
Sbjct: 414  FCEIIIEGSLLFSSHDRKHLAFDVIFLLLQKLSASLVPVVLSNKVVQCLMDILSTKNTWL 473

Query: 472  YKIAQHFLKQLSXXXXXXXXXXXXXXXXLQKHSNGKFDLI--TQTKMVKDLMSQFKTEPG 529
            YK+ +HFLKQLS                +QKHSNGKFD I  T+TK+VKDLMSQFKTEPG
Sbjct: 474  YKVGEHFLKQLSDWVGDDDVKRVAVIVAIQKHSNGKFDCITRTKTKLVKDLMSQFKTEPG 533

Query: 530  CMLFIQNLMNIFVDEGNALEEPSDQSQTTDENSEIGSVEDKDSPMS---SDFLKSWIIES 586
            CMLFIQNLMN+FVDE NALEEPSDQSQTTDENSEIGS+EDK+SP +   SDFLKSW+IES
Sbjct: 534  CMLFIQNLMNLFVDEDNALEEPSDQSQTTDENSEIGSIEDKESPRTNGNSDFLKSWVIES 593

Query: 587  LPSILKCLKLDHEEKFRVQKEIMKFLAVQGLFTASLGTEVTSFELQEKFRWPKSPTSIAL 646
            L  ILK LKLDH+EK RVQKEIMKF+AVQGLFTASLGTEVTSFEL EKFRWPKSPTS AL
Sbjct: 594  LTGILKFLKLDHDEKLRVQKEIMKFMAVQGLFTASLGTEVTSFELDEKFRWPKSPTSNAL 653

Query: 647  CKMCIXXXXXXXXXXXKGEGSRPLANSLE-PNDLGSYFMKFFGTLCNIPSVSLFRSLDDE 705
            CK+CI           KGEGSRP A+ +E PNDLGSYFMKFF TLCNIPSVSLFRSLDDE
Sbjct: 654  CKLCIEQLQLLLANAHKGEGSRPSADVVEPPNDLGSYFMKFFSTLCNIPSVSLFRSLDDE 713

Query: 706  DEKAMKNLQAMETRLSKEERXXXXXXDPNKXXXXXXXXXXXXXXXXXHPGEYSEAASELV 765
            D+KA+K+LQAME  LS+EER      D ++                  P EYSEAASEL+
Sbjct: 714  DDKAVKDLQAMEATLSREERSHDCSDDVHRDHALRYLLIQLLLQVLLCPREYSEAASELI 773

Query: 766  ICFKKTFS-SDLPESSGEDDLEVDDAPELMDVLVDTLLSLLPQSSAPMRSSIDQAFKYIC 824
            IC KKTFS SD+PESSGEDD EV DAPELMDVLVDTLLSLLPQSSAPMRS+IDQ FK  C
Sbjct: 774  ICCKKTFSTSDIPESSGEDDKEVGDAPELMDVLVDTLLSLLPQSSAPMRSAIDQVFKCFC 833

Query: 825  GDTTDDGLTRMLRVIKKNLKPPRHPXXXXXXXXXXXXXXXX--XXXXXXXXQGETGETGE 882
             D TDDGL RMLRVIKKNLKP RHP                          Q ETGETGE
Sbjct: 834  NDITDDGLMRMLRVIKKNLKPARHPDAGSADEDDDDDDDDDLFNIEDEEIDQAETGETGE 893

Query: 883  SDEQTDDSESVVEMEETSHGDPEASNDSDSGMDDDAMFRMDTYLAQIFKEKKNQSGGETA 942
            SD QTDDSESVVE +ET    PE S+DSDSGMDDDAMFRMDTYLAQIFKEKKNQSG ETA
Sbjct: 894  SDGQTDDSESVVEADETGQDHPEDSDDSDSGMDDDAMFRMDTYLAQIFKEKKNQSGSETA 953

Query: 943  HSQLVLFKLRILSLLEIFLHENPGKPQVLLVFSNLAQAFVNPHTAEVSEQLGQRIWGILQ 1002
            HSQL+LFKLRILSLLEIF+HENPGKPQVL V+S+LA+AFVNPHTAEVSEQL QRI GILQ
Sbjct: 954  HSQLLLFKLRILSLLEIFVHENPGKPQVLTVYSHLARAFVNPHTAEVSEQLSQRISGILQ 1013

Query: 1003 KQIFKAKDYPKGDGVQVSTLESLLERNXXXXXXXXXXXXXXXXXXXXXXXXXXVNLKKKQ 1062
            K+I KAKD+PKGD VQ+STLESLLERN                            LKK  
Sbjct: 1014 KKILKAKDHPKGDEVQLSTLESLLERNLKLASKPFRKQKSATNP-----------LKKSA 1062

Query: 1063 SAVRQKMVSSLAQQSTFWILKIIDSGNFSESELGRIVQIFRAALTGYFDNKKSQIKAGFL 1122
            +  R KMVSS AQ STFWILKI+DS NF+ES L RIVQIF+  L  YFD+KKSQ+KA FL
Sbjct: 1063 ALNRYKMVSSFAQNSTFWILKIVDSRNFAESGLQRIVQIFQKILVDYFDSKKSQVKAAFL 1122

Query: 1123 KEIFRRRPWIGHAVLGSILQKCGNAKSDFRRVEALDLVLEILKSTG---GNDQSASRKIV 1179
            KEIF+RRPWIGHAV G IL++CG+AKSDFRRVEAL+LV+EILKS     G  +++S+KIV
Sbjct: 1123 KEIFKRRPWIGHAVFGFILERCGSAKSDFRRVEALELVMEILKSLATESGEGKNSSKKIV 1182

Query: 1180 KSNLDKLSFLMKELVTNMPSKSARRSEVNKFCVKCFEILSKLNLTKPLVKALPPDAQAAL 1239
            KSNLDK+S  MKELVTNMPSK ARR+EV KFCVK FEILSK +LTK L+K L P+AQAAL
Sbjct: 1183 KSNLDKISHAMKELVTNMPSKQARRAEVRKFCVKVFEILSKHSLTKYLLKTLAPEAQAAL 1242

Query: 1240 EAQLGDKFTRLKKLDK 1255
            EAQLG+KF  LKKL+K
Sbjct: 1243 EAQLGEKFLCLKKLEK 1258


>Medtr2g086320.1 | DNA polymerase V-like protein, putative | HC |
           chr2:36301257-36300914 | 20130731
          Length = 99

 Score =  108 bits (271), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 67/112 (59%), Positives = 74/112 (66%), Gaps = 22/112 (19%)

Query: 531 MLFIQNLMNIFVDEGNALEEPSDQSQTTDENSEIGSVEDKDSPMS---SDFLKSWIIESL 587
           MLFIQNLMN+FVDE                 SEIGS+EDK+SP +   SDFLKSW +ESL
Sbjct: 1   MLFIQNLMNLFVDEII---------------SEIGSIEDKESPRTDENSDFLKSWAVESL 45

Query: 588 PSILKCLKLDHEEKFRVQKEIMKFLAVQGLFTASLGTEVTSFELQEKFRWPK 639
           P ILK LKLD  EK  VQKEIMKFL+V  +       EVTSFEL EKFRWPK
Sbjct: 46  PGILKFLKLDCGEKLPVQKEIMKFLSVPCI----SWHEVTSFELVEKFRWPK 93