Miyakogusa Predicted Gene

Lj6g3v2171950.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2171950.1 Non Characterized Hit- tr|I1ME36|I1ME36_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,86.75,0,RING/U-box,NULL; seg,NULL; C-terminal to LisH
motif.,CTLH, C-terminal LisH motif; CT11-RanBPM,CRA do,CUFF.60744.1
         (384 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g010210.1 | LisH/CRA/RING-U-box protein | HC | chr2:227076...   643   0.0  
Medtr2g010210.2 | LisH/CRA/RING-U-box protein | HC | chr2:227076...   643   0.0  
Medtr2g010210.3 | LisH/CRA/RING-U-box protein | HC | chr2:227054...   643   0.0  
Medtr8g067470.1 | LisH/CRA/RING-U-box protein | HC | chr8:281722...   456   e-128
Medtr5g045140.1 | RING-type zinc-finger, LisH dimerization motif...   124   2e-28
Medtr1g116055.1 | macrophage erythroblast attacher-like protein ...   102   8e-22
Medtr1g116055.2 | macrophage erythroblast attacher-like protein ...    76   5e-14

>Medtr2g010210.1 | LisH/CRA/RING-U-box protein | HC |
           chr2:2270765-2267793 | 20130731
          Length = 387

 Score =  643 bits (1659), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 303/383 (79%), Positives = 337/383 (87%), Gaps = 1/383 (0%)

Query: 3   LSSIKDAFDRVAXXXXXXXXXXXEVVDQVGREIEQALATIQSPHDP-SILDQKSILTELK 61
           LSSIKDAFDRVA           E VDQVGREIEQALAT+QSP DP ++ DQKSILTELK
Sbjct: 5   LSSIKDAFDRVAKKQKTCSSKSQETVDQVGREIEQALATLQSPQDPLTLADQKSILTELK 64

Query: 62  SKLNAIGALQQLEGSHKEWNQSLSKYQKLLEKLFNPDISKAYRNVDFDTHIINQIIASHF 121
           SKLNAIG+LQ LEG  KE N S++KYQKL EKL NPDISKAYRNV+FD+HIINQIIASHF
Sbjct: 65  SKLNAIGSLQHLEGPTKELNSSIAKYQKLTEKLLNPDISKAYRNVEFDSHIINQIIASHF 124

Query: 122 YRQGLSDLGDSIINEAGEPEATALRSQFLEMHKIIEAMRGRNIQPALSWVTANQERLAKI 181
           YRQGL DLGDSIINEA E  ATA+RS FLEMH +IEAMR RN+QPAL+WV+AN+E+L +I
Sbjct: 125 YRQGLFDLGDSIINEAEESNATAIRSNFLEMHHVIEAMRVRNLQPALTWVSANREKLVQI 184

Query: 182 GSNLELKIHTLQFVDVLQTGTRADALKYARTYLSPFASINKDEFQKLMGCLLYAGRLANS 241
           GSNLELKIHTLQ+V+V+Q GT+ADALKY+RT L+PFA + KDEF KLMGCL+Y GRL NS
Sbjct: 185 GSNLELKIHTLQYVEVVQNGTQADALKYSRTCLAPFAKLYKDEFHKLMGCLMYVGRLQNS 244

Query: 242 PYSELISSTHWEMTTEELARQFCTLMGQSYESPLSMAVAAGVAGLPTLLKLANVMAAKKQ 301
           PY+EL+S  HWEMTTEELARQFC LMGQSYE+PL++  AAG+ GLPTLLKL NVMAAKKQ
Sbjct: 245 PYAELLSPVHWEMTTEELARQFCYLMGQSYENPLNVVFAAGIEGLPTLLKLVNVMAAKKQ 304

Query: 302 EWQEMKQLPVPVDLGKEFQFHSIFVCPVSRDQGSDENPPMLLPCSHVLCKQSIAKLSKNS 361
           EWQEMKQLPVPV+LGKEFQFHSIFVCPVSRDQGS+ENPPMLLPC HVLCKQSI KLSKNS
Sbjct: 305 EWQEMKQLPVPVELGKEFQFHSIFVCPVSRDQGSEENPPMLLPCLHVLCKQSIMKLSKNS 364

Query: 362 TRTFKCPYCPAEATVAHCRQLYF 384
           TRTFKCPYCPAEATVAHCRQ++F
Sbjct: 365 TRTFKCPYCPAEATVAHCRQVFF 387


>Medtr2g010210.2 | LisH/CRA/RING-U-box protein | HC |
           chr2:2270765-2267793 | 20130731
          Length = 387

 Score =  643 bits (1659), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 303/383 (79%), Positives = 337/383 (87%), Gaps = 1/383 (0%)

Query: 3   LSSIKDAFDRVAXXXXXXXXXXXEVVDQVGREIEQALATIQSPHDP-SILDQKSILTELK 61
           LSSIKDAFDRVA           E VDQVGREIEQALAT+QSP DP ++ DQKSILTELK
Sbjct: 5   LSSIKDAFDRVAKKQKTCSSKSQETVDQVGREIEQALATLQSPQDPLTLADQKSILTELK 64

Query: 62  SKLNAIGALQQLEGSHKEWNQSLSKYQKLLEKLFNPDISKAYRNVDFDTHIINQIIASHF 121
           SKLNAIG+LQ LEG  KE N S++KYQKL EKL NPDISKAYRNV+FD+HIINQIIASHF
Sbjct: 65  SKLNAIGSLQHLEGPTKELNSSIAKYQKLTEKLLNPDISKAYRNVEFDSHIINQIIASHF 124

Query: 122 YRQGLSDLGDSIINEAGEPEATALRSQFLEMHKIIEAMRGRNIQPALSWVTANQERLAKI 181
           YRQGL DLGDSIINEA E  ATA+RS FLEMH +IEAMR RN+QPAL+WV+AN+E+L +I
Sbjct: 125 YRQGLFDLGDSIINEAEESNATAIRSNFLEMHHVIEAMRVRNLQPALTWVSANREKLVQI 184

Query: 182 GSNLELKIHTLQFVDVLQTGTRADALKYARTYLSPFASINKDEFQKLMGCLLYAGRLANS 241
           GSNLELKIHTLQ+V+V+Q GT+ADALKY+RT L+PFA + KDEF KLMGCL+Y GRL NS
Sbjct: 185 GSNLELKIHTLQYVEVVQNGTQADALKYSRTCLAPFAKLYKDEFHKLMGCLMYVGRLQNS 244

Query: 242 PYSELISSTHWEMTTEELARQFCTLMGQSYESPLSMAVAAGVAGLPTLLKLANVMAAKKQ 301
           PY+EL+S  HWEMTTEELARQFC LMGQSYE+PL++  AAG+ GLPTLLKL NVMAAKKQ
Sbjct: 245 PYAELLSPVHWEMTTEELARQFCYLMGQSYENPLNVVFAAGIEGLPTLLKLVNVMAAKKQ 304

Query: 302 EWQEMKQLPVPVDLGKEFQFHSIFVCPVSRDQGSDENPPMLLPCSHVLCKQSIAKLSKNS 361
           EWQEMKQLPVPV+LGKEFQFHSIFVCPVSRDQGS+ENPPMLLPC HVLCKQSI KLSKNS
Sbjct: 305 EWQEMKQLPVPVELGKEFQFHSIFVCPVSRDQGSEENPPMLLPCLHVLCKQSIMKLSKNS 364

Query: 362 TRTFKCPYCPAEATVAHCRQLYF 384
           TRTFKCPYCPAEATVAHCRQ++F
Sbjct: 365 TRTFKCPYCPAEATVAHCRQVFF 387


>Medtr2g010210.3 | LisH/CRA/RING-U-box protein | HC |
           chr2:2270540-2267793 | 20130731
          Length = 387

 Score =  643 bits (1659), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 303/383 (79%), Positives = 337/383 (87%), Gaps = 1/383 (0%)

Query: 3   LSSIKDAFDRVAXXXXXXXXXXXEVVDQVGREIEQALATIQSPHDP-SILDQKSILTELK 61
           LSSIKDAFDRVA           E VDQVGREIEQALAT+QSP DP ++ DQKSILTELK
Sbjct: 5   LSSIKDAFDRVAKKQKTCSSKSQETVDQVGREIEQALATLQSPQDPLTLADQKSILTELK 64

Query: 62  SKLNAIGALQQLEGSHKEWNQSLSKYQKLLEKLFNPDISKAYRNVDFDTHIINQIIASHF 121
           SKLNAIG+LQ LEG  KE N S++KYQKL EKL NPDISKAYRNV+FD+HIINQIIASHF
Sbjct: 65  SKLNAIGSLQHLEGPTKELNSSIAKYQKLTEKLLNPDISKAYRNVEFDSHIINQIIASHF 124

Query: 122 YRQGLSDLGDSIINEAGEPEATALRSQFLEMHKIIEAMRGRNIQPALSWVTANQERLAKI 181
           YRQGL DLGDSIINEA E  ATA+RS FLEMH +IEAMR RN+QPAL+WV+AN+E+L +I
Sbjct: 125 YRQGLFDLGDSIINEAEESNATAIRSNFLEMHHVIEAMRVRNLQPALTWVSANREKLVQI 184

Query: 182 GSNLELKIHTLQFVDVLQTGTRADALKYARTYLSPFASINKDEFQKLMGCLLYAGRLANS 241
           GSNLELKIHTLQ+V+V+Q GT+ADALKY+RT L+PFA + KDEF KLMGCL+Y GRL NS
Sbjct: 185 GSNLELKIHTLQYVEVVQNGTQADALKYSRTCLAPFAKLYKDEFHKLMGCLMYVGRLQNS 244

Query: 242 PYSELISSTHWEMTTEELARQFCTLMGQSYESPLSMAVAAGVAGLPTLLKLANVMAAKKQ 301
           PY+EL+S  HWEMTTEELARQFC LMGQSYE+PL++  AAG+ GLPTLLKL NVMAAKKQ
Sbjct: 245 PYAELLSPVHWEMTTEELARQFCYLMGQSYENPLNVVFAAGIEGLPTLLKLVNVMAAKKQ 304

Query: 302 EWQEMKQLPVPVDLGKEFQFHSIFVCPVSRDQGSDENPPMLLPCSHVLCKQSIAKLSKNS 361
           EWQEMKQLPVPV+LGKEFQFHSIFVCPVSRDQGS+ENPPMLLPC HVLCKQSI KLSKNS
Sbjct: 305 EWQEMKQLPVPVELGKEFQFHSIFVCPVSRDQGSEENPPMLLPCLHVLCKQSIMKLSKNS 364

Query: 362 TRTFKCPYCPAEATVAHCRQLYF 384
           TRTFKCPYCPAEATVAHCRQ++F
Sbjct: 365 TRTFKCPYCPAEATVAHCRQVFF 387


>Medtr8g067470.1 | LisH/CRA/RING-U-box protein | HC |
           chr8:28172299-28173450 | 20130731
          Length = 383

 Score =  456 bits (1173), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 215/387 (55%), Positives = 285/387 (73%), Gaps = 7/387 (1%)

Query: 1   MELSSIKDAFDRVAXXXXXXXXXXXEVVDQVGREIEQALATIQSPHDP-SILDQKSILTE 59
           MELSS+KDAFDRV            E++DQ+  EIE  + ++QS ++   +LD K++L E
Sbjct: 1   MELSSVKDAFDRVTKKQKLSSSKAQEMIDQISHEIETVIESLQSVNNTVQVLDSKTVLNE 60

Query: 60  LKSKLNAIGALQQLEGSHKEWNQSLSKYQKLLEKLFNPDISKAYRNVDFDTHIINQIIAS 119
           LK+ L  I  + Q+E + KE N +LSKY K LEK F PDISKAYRN +FD H +NQIIA+
Sbjct: 61  LKASLLKISPIGQMESTQKELNVALSKYGKHLEKSF-PDISKAYRNTNFDIHTLNQIIAN 119

Query: 120 HFYRQGLSDLGDSIINEAGEPEATA-LRSQFLEMHKIIEAMRGRNIQPALSWVTANQERL 178
           HFYRQGL D+GD  ++  GEPE+ A ++S FLEM++I+EAM+ +N++PAL+W   N ++L
Sbjct: 120 HFYRQGLFDVGDHFLSAVGEPESAASMKSPFLEMYQILEAMQNQNLEPALNWAATNSDKL 179

Query: 179 AKIGSNLELKIHTLQFVDVLQTG-TRADALKYARTYLSPFASINKDEFQKLMGCLLYAGR 237
           A+ GS++ LK+H++QFV +LQ G +R +AL YARTYLSPFA+ +  E QKLM CLL+ G+
Sbjct: 180 AQSGSDIVLKLHSMQFVKLLQNGGSRDEALHYARTYLSPFATSHIAEVQKLMACLLWPGK 239

Query: 238 LANSPYSELISSTHWEMTTEELARQFCTLMGQSYESPLSMAVAAGVAGLPTLLKLANVMA 297
           +  SPY  L+S ++W+   EEL RQFC L+GQSY SPLS+ VAAG+  LP LLK   VM 
Sbjct: 240 IEKSPYHALLSPSNWDRLAEELKRQFCNLLGQSYNSPLSVTVAAGIQVLPALLKFMIVM- 298

Query: 298 AKKQEWQEMKQLPVPVDLGKEFQFHSIFVCPVSRDQGSDENPPMLLPCSHVLCKQSIAKL 357
             KQEWQ M QLPVP+++  EFQFHS+FVCPVS++Q ++ENPPML+ C HVLCKQSI K+
Sbjct: 299 --KQEWQSMSQLPVPIEMDSEFQFHSVFVCPVSKEQATEENPPMLMSCGHVLCKQSILKM 356

Query: 358 SKNSTRTFKCPYCPAEATVAHCRQLYF 384
           SKNST+ FKCPYCP +   A C+QLY 
Sbjct: 357 SKNSTKVFKCPYCPFDIDAAQCKQLYL 383


>Medtr5g045140.1 | RING-type zinc-finger, LisH dimerization motif
           protein | LC | chr5:19788373-19789064 | 20130731
          Length = 173

 Score =  124 bits (311), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 65/126 (51%), Positives = 77/126 (61%), Gaps = 16/126 (12%)

Query: 257 EELARQFCTLMGQSYESPLSMAVAAGVAGLPTLLKLANVMAAKKQEWQEMKQLPVPVDLG 316
           EEL RQFC L+GQSY SPLS+ VAAGV  LP LLK  N+M+ K               L 
Sbjct: 62  EELKRQFCDLLGQSYNSPLSLTVAAGVLFLPALLKFMNIMSGK---------------LT 106

Query: 317 KEFQFHSIFVCPVSRDQGSDENPPMLLPCSHVLCKQSIAKLSKNSTRTFKCPYCPAEATV 376
           K   +  IF C VS++Q +++N PMLL C HVLC QSI K+S NST  FK PYCP +   
Sbjct: 107 KNSSYI-IFFCLVSKEQATEDNHPMLLSCGHVLCDQSILKMSMNSTEAFKFPYCPFDIDA 165

Query: 377 AHCRQL 382
           A C QL
Sbjct: 166 AQCMQL 171


>Medtr1g116055.1 | macrophage erythroblast attacher-like protein |
           HC | chr1:52446990-52441637 | 20130731
          Length = 415

 Score =  102 bits (253), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 80/323 (24%), Positives = 155/323 (47%), Gaps = 9/323 (2%)

Query: 47  DPSILDQKSILTELKSKLNAIGALQQLEGSHKEWNQSLSKYQKLLEKLFNPDISKAYRNV 106
           D S  D  + L  L S+L   G  ++LE  ++  N    K +  +E L   + ++A    
Sbjct: 84  DLSPDDAVNHLNSLVSRLQ--GLKRKLEEGNRAENLQAQKCRVRIEHL---ESAEAENMS 138

Query: 107 DFDTHIINQIIASHFYRQGLSDLGDSIINEAGEPEATALRSQFLEMHKIIEAMRGRNIQP 166
           +++T  + +I+  +  R    D  + +  E    +       F E   +I+A++ ++  P
Sbjct: 139 EWNTTRLKRILVDYMLRMSYYDTAEKLA-ECSNLQDLVDIDVFQEAKTVIDALQNKDAAP 197

Query: 167 ALSWVTANQERLAKIGSNLELKIHTLQFVDVLQTGTRADALKYARTYLSPFASINKDEFQ 226
           AL+W   N+ RL K  S LE ++   +F+++++T +   A+ YA+ YL+P+A  +  E Q
Sbjct: 198 ALAWCADNKSRLKKSKSKLEFQLRLQEFIELVRTESNLRAIAYAKKYLAPWAGNHMKELQ 257

Query: 227 KLMGCLLYAGRLANSPYSELISSTHWEMTTEELARQFCTLMGQSYESPLSMAVAAGVAGL 286
           ++   L +      + Y  L     W+   +   ++FC L G + E  L++ + AG++ L
Sbjct: 258 EVTALLAFKRDTPCTKYKVLFEPKQWDYLVDHFKQEFCKLYGMTLEPLLNIYLQAGLSAL 317

Query: 287 PTLLKLANVMAAKKQEWQE-MKQLPVPVDLGKEFQFHSIFVCPVSRDQGSDENPPMLLPC 345
            T     +    +    QE  + L +P+   K  Q HS  VC ++++    ENPP +LP 
Sbjct: 318 KTPYCYEDDCTKEDPLSQEAFRTLALPLPYSK--QHHSKLVCYITKELMDTENPPQVLPN 375

Query: 346 SHVLCKQSIAKLSKNSTRTFKCP 368
            +V   +++ +++K +     CP
Sbjct: 376 GYVYSTKALEEMAKKNNGRIICP 398


>Medtr1g116055.2 | macrophage erythroblast attacher-like protein |
           HC | chr1:52446970-52441637 | 20130731
          Length = 322

 Score = 76.3 bits (186), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 117/242 (48%), Gaps = 6/242 (2%)

Query: 47  DPSILDQKSILTELKSKLNAIGALQQLEGSHKEWNQSLSKYQKLLEKLFNPDISKAYRNV 106
           D S  D  + L  L S+L   G  ++LE  ++  N    K +  +E L   + ++A    
Sbjct: 84  DLSPDDAVNHLNSLVSRLQ--GLKRKLEEGNRAENLQAQKCRVRIEHL---ESAEAENMS 138

Query: 107 DFDTHIINQIIASHFYRQGLSDLGDSIINEAGEPEATALRSQFLEMHKIIEAMRGRNIQP 166
           +++T  + +I+  +  R    D  + +  E    +       F E   +I+A++ ++  P
Sbjct: 139 EWNTTRLKRILVDYMLRMSYYDTAEKLA-ECSNLQDLVDIDVFQEAKTVIDALQNKDAAP 197

Query: 167 ALSWVTANQERLAKIGSNLELKIHTLQFVDVLQTGTRADALKYARTYLSPFASINKDEFQ 226
           AL+W   N+ RL K  S LE ++   +F+++++T +   A+ YA+ YL+P+A  +  E Q
Sbjct: 198 ALAWCADNKSRLKKSKSKLEFQLRLQEFIELVRTESNLRAIAYAKKYLAPWAGNHMKELQ 257

Query: 227 KLMGCLLYAGRLANSPYSELISSTHWEMTTEELARQFCTLMGQSYESPLSMAVAAGVAGL 286
           ++   L +      + Y  L     W+   +   ++FC L G + E  L++ + AG++ L
Sbjct: 258 EVTALLAFKRDTPCTKYKVLFEPKQWDYLVDHFKQEFCKLYGMTLEPLLNIYLQAGLSAL 317

Query: 287 PT 288
            T
Sbjct: 318 KT 319