Miyakogusa Predicted Gene

Lj6g3v2171770.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2171770.2 tr|A9SDH9|A9SDH9_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_211137,53.42,0.00000000000002,seg,NULL;
coiled-coil,NULL,CUFF.60795.2
         (294 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g010510.2 | plant/T16L1-180 protein, putative | HC | chr2:...   218   6e-57
Medtr2g010510.1 | plant/T16L1-180 protein, putative | HC | chr2:...   218   6e-57

>Medtr2g010510.2 | plant/T16L1-180 protein, putative | HC |
           chr2:2415661-2420889 | 20130731
          Length = 320

 Score =  218 bits (554), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 130/234 (55%), Positives = 143/234 (61%), Gaps = 45/234 (19%)

Query: 1   MDLESENXXXXXXXXXXXXXXXQAEKEGVLAYLSKPNVRNRPNSRFLTATVLGVQQSNRV 60
           MDLE+EN               Q+EKEGVLAYL KPNVR+RPNSRFLTATV GVQQ+NR 
Sbjct: 1   MDLETENRLAAMLMREAAELRRQSEKEGVLAYLQKPNVRSRPNSRFLTATVRGVQQANRA 60

Query: 61  VEVNEMWRVRQKEKELDERVRGTSSDKSSGDRSHRDDKTSRSSIGNSTRTSASCSSKRQF 120
           VEVNEMWR R+KE ELD+RV G+S DK S D+ H D  TSRS+                 
Sbjct: 61  VEVNEMWRAREKELELDKRVTGSSKDKRSDDKRHMDHNTSRSA----------------- 103

Query: 121 EMEVKDTSKDKNSSDRSHRDSKLLGRTGRHAVIDESTSASASCLNKRGHEHPPEGLKDEE 180
                                       RHA  D STSASASC  K  + H  EGLKDEE
Sbjct: 104 ---------------------------ERHAGDDRSTSASASCSTKNEYGHTQEGLKDEE 136

Query: 181 LEEFLHSRTKRGRGAVGPRMDETGPYLPPHTDGEPSTSPDARERRRVIYGPEMP 234
           LEEFLHSR KRGRGA+GPRMDETGPYLPP+ D EPSTSPD RE  R IYGP+ P
Sbjct: 137 LEEFLHSRKKRGRGAIGPRMDETGPYLPPNPDEEPSTSPDFRE-HRAIYGPKRP 189


>Medtr2g010510.1 | plant/T16L1-180 protein, putative | HC |
           chr2:2415819-2420924 | 20130731
          Length = 320

 Score =  218 bits (554), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 130/234 (55%), Positives = 143/234 (61%), Gaps = 45/234 (19%)

Query: 1   MDLESENXXXXXXXXXXXXXXXQAEKEGVLAYLSKPNVRNRPNSRFLTATVLGVQQSNRV 60
           MDLE+EN               Q+EKEGVLAYL KPNVR+RPNSRFLTATV GVQQ+NR 
Sbjct: 1   MDLETENRLAAMLMREAAELRRQSEKEGVLAYLQKPNVRSRPNSRFLTATVRGVQQANRA 60

Query: 61  VEVNEMWRVRQKEKELDERVRGTSSDKSSGDRSHRDDKTSRSSIGNSTRTSASCSSKRQF 120
           VEVNEMWR R+KE ELD+RV G+S DK S D+ H D  TSRS+                 
Sbjct: 61  VEVNEMWRAREKELELDKRVTGSSKDKRSDDKRHMDHNTSRSA----------------- 103

Query: 121 EMEVKDTSKDKNSSDRSHRDSKLLGRTGRHAVIDESTSASASCLNKRGHEHPPEGLKDEE 180
                                       RHA  D STSASASC  K  + H  EGLKDEE
Sbjct: 104 ---------------------------ERHAGDDRSTSASASCSTKNEYGHTQEGLKDEE 136

Query: 181 LEEFLHSRTKRGRGAVGPRMDETGPYLPPHTDGEPSTSPDARERRRVIYGPEMP 234
           LEEFLHSR KRGRGA+GPRMDETGPYLPP+ D EPSTSPD RE  R IYGP+ P
Sbjct: 137 LEEFLHSRKKRGRGAIGPRMDETGPYLPPNPDEEPSTSPDFRE-HRAIYGPKRP 189