Miyakogusa Predicted Gene

Lj6g3v2145460.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2145460.1 Non Characterized Hit- tr|I1LRT8|I1LRT8_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,47.73,3e-19,seg,NULL;
DUF1218,Protein of unknown function DUF1218,CUFF.60708.1
         (176 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g010840.1 | transmembrane protein, putative | HC | chr2:25...   259   1e-69
Medtr4g092130.1 | transmembrane protein, putative | HC | chr4:36...   235   2e-62
Medtr2g089050.1 | transmembrane protein, putative | HC | chr2:37...   171   3e-43
Medtr4g045673.1 | transmembrane protein, putative | HC | chr4:15...   168   3e-42

>Medtr2g010840.1 | transmembrane protein, putative | HC |
           chr2:2549420-2547747 | 20130731
          Length = 176

 Score =  259 bits (661), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 124/176 (70%), Positives = 145/176 (82%)

Query: 1   MAKNFGFLVCILVMVLDIVAGILGIQAEIVQNKEKQMKVWGFECRHPSYQAFKXXXXXXX 60
           MAKN+GFL+CILVMV+DIVAGILGIQAEI QNKEK MK+W F+CR+PS+QAF+       
Sbjct: 1   MAKNYGFLICILVMVMDIVAGILGIQAEITQNKEKPMKMWIFDCRYPSHQAFQLGLAALI 60

Query: 61  XXXXXXXXXXXXGGCICVRSREQYQSATANRQLAVAFLIFSWIVLAVAFSMLIIGTLANS 120
                       GGC+CV S++QY+SATAN+QL++AFLIFSW+V+AVAFSMLIIGTLANS
Sbjct: 61  LLSLAHIIANLLGGCVCVWSKDQYRSATANKQLSMAFLIFSWLVMAVAFSMLIIGTLANS 120

Query: 121 RSRKPCVLYNHHFLSIGGILCFIHGLFTVPYYVSATATRREEKRQPGNPGPAIRHT 176
           RSRK C ++NH FL IGGILCFIHGLFTVPYYVSATATRREEKRQ  + GPA+R T
Sbjct: 121 RSRKSCGIFNHRFLFIGGILCFIHGLFTVPYYVSATATRREEKRQLESLGPAVRRT 176


>Medtr4g092130.1 | transmembrane protein, putative | HC |
           chr4:36573376-36574588 | 20130731
          Length = 164

 Score =  235 bits (599), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 110/164 (67%), Positives = 130/164 (79%)

Query: 1   MAKNFGFLVCILVMVLDIVAGILGIQAEIVQNKEKQMKVWGFECRHPSYQAFKXXXXXXX 60
           M +N+GFLVCI+V+++D+VAGILGIQAEI QNK K +K+W  ECR PSYQAFK       
Sbjct: 1   MVRNYGFLVCIVVILMDVVAGILGIQAEIAQNKVKDLKIWVLECRDPSYQAFKLGLSASI 60

Query: 61  XXXXXXXXXXXXGGCICVRSREQYQSATANRQLAVAFLIFSWIVLAVAFSMLIIGTLANS 120
                       GGCIC++S+E+Y+ AT+NRQLA+AFLIFSWIVL VAFSMLIIGTLANS
Sbjct: 61  LLVLAHAIAHVLGGCICIKSKEEYKRATSNRQLAMAFLIFSWIVLGVAFSMLIIGTLANS 120

Query: 121 RSRKPCVLYNHHFLSIGGILCFIHGLFTVPYYVSATATRREEKR 164
           +SR+ C + NH FLSIGGILCFIHGLFTV YYVSATATRREE +
Sbjct: 121 KSRESCGISNHRFLSIGGILCFIHGLFTVAYYVSATATRREEYK 164


>Medtr2g089050.1 | transmembrane protein, putative | HC |
           chr2:37567644-37566243 | 20130731
          Length = 158

 Score =  171 bits (433), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 80/158 (50%), Positives = 106/158 (67%)

Query: 1   MAKNFGFLVCILVMVLDIVAGILGIQAEIVQNKEKQMKVWGFECRHPSYQAFKXXXXXXX 60
           MA+  G  +C+L++++D+ AGILGI+AEI QNK K +++W FECR PS++AF        
Sbjct: 1   MAREVGIFLCLLIVIMDVTAGILGIEAEIAQNKVKHLRLWIFECRDPSHKAFMFGLAASI 60

Query: 61  XXXXXXXXXXXXGGCICVRSREQYQSATANRQLAVAFLIFSWIVLAVAFSMLIIGTLANS 120
                       GGC C   ++  Q ++ NRQL++A LI +WIVLAV  SML+IGT  N+
Sbjct: 61  LLSLAHVIANLLGGCGCFCFQQDIQKSSPNRQLSMAILILTWIVLAVGLSMLVIGTKTNN 120

Query: 121 RSRKPCVLYNHHFLSIGGILCFIHGLFTVPYYVSATAT 158
           RS   C   +HHFLSIGGILCF+HGLF V YYVSATA+
Sbjct: 121 RSSGTCGFTDHHFLSIGGILCFVHGLFCVSYYVSATAS 158


>Medtr4g045673.1 | transmembrane protein, putative | HC |
           chr4:15516756-15514692 | 20130731
          Length = 160

 Score =  168 bits (425), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 76/158 (48%), Positives = 109/158 (68%)

Query: 1   MAKNFGFLVCILVMVLDIVAGILGIQAEIVQNKEKQMKVWGFECRHPSYQAFKXXXXXXX 60
           MA+  G +VC+L++++DI AGILG +AEI QNK K +KVW FECR PS+ AF        
Sbjct: 1   MARVGGIVVCLLIVIMDIAAGILGFEAEIAQNKVKHLKVWIFECREPSHDAFMLGLGAAV 60

Query: 61  XXXXXXXXXXXXGGCICVRSREQYQSATANRQLAVAFLIFSWIVLAVAFSMLIIGTLANS 120
                       GGC CV S+++++ A+++RQL+V  LI +W+V+AV  SML+IG ++N+
Sbjct: 61  LLGLSHVIANLLGGCNCVCSQQEFEKASSHRQLSVVCLILTWVVVAVGLSMLVIGAMSNN 120

Query: 121 RSRKPCVLYNHHFLSIGGILCFIHGLFTVPYYVSATAT 158
           RS+  C   +HHFLSIGG+ CF+HGLF+V YY+  TA+
Sbjct: 121 RSKDSCGFSHHHFLSIGGMSCFVHGLFSVIYYIVTTAS 158