Miyakogusa Predicted Gene

Lj6g3v2134250.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2134250.1 CUFF.60701.1
         (353 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g010980.1 | hypothetical protein | HC | chr2:2608996-26075...   279   4e-75
Medtr6g012780.1 | pro-resilin, putative | HC | chr6:3973519-3969...    60   4e-09
Medtr6g012780.2 | pro-resilin, putative | HC | chr6:3973351-3969...    60   5e-09

>Medtr2g010980.1 | hypothetical protein | HC | chr2:2608996-2607568
           | 20130731
          Length = 314

 Score =  279 bits (713), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 180/325 (55%), Positives = 207/325 (63%), Gaps = 36/325 (11%)

Query: 1   MAYYYNSANSGSEYGEYNFNSYAVNYDYAPQVPPFMNYNSHEYNQVNQPYYGYDQSLCFA 60
           MAYYY+S  SGS+YGE NFNSY  NYDYA QVP FM YNS++YNQ   P Y YD SL FA
Sbjct: 1   MAYYYSSC-SGSDYGENNFNSYTFNYDYA-QVPSFMTYNSYDYNQ---PNYAYDSSLYFA 55

Query: 61  P-NYYPDQCY-QRVSYSATNFSEPKSLVYDPNYGMSQLVISYSKLEFNEPEFEEYDPTPY 118
           P N YPD  Y Q ++YSAT FS+PK LVYDPNYGM+QLV+SYS LEFNEP F+EYDPTPY
Sbjct: 56  PSNNYPDHSYNQTIAYSATTFSDPKYLVYDPNYGMTQLVLSYSTLEFNEPAFDEYDPTPY 115

Query: 119 GGGYDIVETYGKPLPPSDKICHPRSDGPSSNSIIPLDTVPAVSIVPLPTVKEGIDEKAII 178
           GGGYDI  TYGKPL PSDKIC+PRS    S        +P    +PLP  +  +DEK I 
Sbjct: 116 GGGYDIDSTYGKPLAPSDKICYPRS---GSIPTPIPIPIPIPIPIPLPVEEAKLDEKVIK 172

Query: 179 -PQNGTAGQMLEDKPQSQDIISTDQPKEVENNRHVTFDLKAXXXXXXXXXXXXXXXXXXX 237
            PQN T  Q   +KPQ QD                   +K                    
Sbjct: 173 PPQNETKDQNAVEKPQLQDST-----------------IKETSEAYEGEESEDSEEKDDG 215

Query: 238 XCNGYS--GVQYDEHE--KQV-PLQYPSGYGLETVDICESLFGNWPCLSRMKREQQQALG 292
             +G+S  G  + E E  K+V P QYPSGYGLET+DICESLFG WPCLS+MKRE    +G
Sbjct: 216 YNSGWSIDGSGFGEIEIVKEVTPPQYPSGYGLETLDICESLFGTWPCLSKMKRENYCNVG 275

Query: 293 ---GNNCQDNMWQGTADYLFGNPYP 314
              GNNC++NMW+ TADYLFGNPYP
Sbjct: 276 IHRGNNCEENMWKETADYLFGNPYP 300


>Medtr6g012780.1 | pro-resilin, putative | HC | chr6:3973519-3969959
           | 20130731
          Length = 411

 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 38/60 (63%), Gaps = 4/60 (6%)

Query: 109 EFEEYDPTPYGGGYDIVETYGKPLPPSDKICHPRSDGPSSNSIIPLDTVPAVSIVPLPTV 168
           +F+EYDPTPYGGGYDI  TYG+P+PPSD+ C+P     SSN+    D  P       P+ 
Sbjct: 16  DFDEYDPTPYGGGYDIHLTYGRPIPPSDETCYPSG---SSNNDFDYD-RPQFESYAQPSA 71


>Medtr6g012780.2 | pro-resilin, putative | HC | chr6:3973351-3969959
           | 20130731
          Length = 390

 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 24/33 (72%), Positives = 30/33 (90%)

Query: 109 EFEEYDPTPYGGGYDIVETYGKPLPPSDKICHP 141
           +F+EYDPTPYGGGYDI  TYG+P+PPSD+ C+P
Sbjct: 16  DFDEYDPTPYGGGYDIHLTYGRPIPPSDETCYP 48