Miyakogusa Predicted Gene

Lj6g3v2133230.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2133230.1 Non Characterized Hit- tr|I3SC95|I3SC95_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.7,0,FAMILY NOT
NAMED,NULL; seg,NULL,CUFF.60694.1
         (231 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g011000.1 | plastid developmental protein DAG | HC | chr2:...   342   2e-94
Medtr4g120340.1 | plastid developmental protein DAG | HC | chr4:...   159   2e-39
Medtr2g006210.1 | plastid developmental protein DAG, putative | ...   147   1e-35
Medtr1g041745.1 | plastid developmental protein DAG | HC | chr1:...   144   9e-35
Medtr1g075460.1 | plastid developmental protein DAG | HC | chr1:...   140   7e-34
Medtr1g075460.2 | plastid developmental protein DAG | HC | chr1:...   140   7e-34
Medtr1g041745.2 | plastid developmental protein DAG | HC | chr1:...   129   2e-30
Medtr2g078090.1 | plastid developmental protein DAG | HC | chr2:...   126   1e-29
Medtr1g009840.1 | plastid developmental protein DAG | HC | chr1:...   124   6e-29
Medtr2g006240.1 | plastid developmental protein DAG, putative | ...    98   7e-21
Medtr6g043040.1 | plastid developmental protein DAG | LC | chr6:...    90   2e-18
Medtr1g092860.1 | RNA-binding (RRM/RBD/RNP motif) family protein...    74   9e-14

>Medtr2g011000.1 | plastid developmental protein DAG | HC |
           chr2:2614958-2612197 | 20130731
          Length = 221

 Score =  342 bits (876), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 174/235 (74%), Positives = 195/235 (82%), Gaps = 18/235 (7%)

Query: 1   MATIT-FSFSAKTLTL--PFHSKTXXXXXXXXXXXXXXRVAPRSIRAVTRARNPTRIRAA 57
           MATI+ F+ S+KTLTL  P+H+KT                 P SI++   +RNP RI+A 
Sbjct: 1   MATISSFTISSKTLTLNLPYHTKTPNF-----------NFNPLSIKSKPSSRNPIRIQAV 49

Query: 58  LDEDYSAKRSSSSEQRETIMLPGCDYNHWLIVMEFPKDPAPSREQMIETYLFTLSTVLGS 117
           LDEDYS+KRS S+EQRETIMLPGCDYNHWLIVMEFPKDPAPSR+QMI+TYL TL+TVLGS
Sbjct: 50  LDEDYSSKRSGSNEQRETIMLPGCDYNHWLIVMEFPKDPAPSRDQMIDTYLQTLATVLGS 109

Query: 118 MEEAKKNMYAFSTTTYTGFQCTVDEATSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYIN 177
           MEEAKKNMYAFSTTTYTGFQCTVDEATSEKFKGLPGVLWVLPDSYIDVKN DYGGDKYIN
Sbjct: 110 MEEAKKNMYAFSTTTYTGFQCTVDEATSEKFKGLPGVLWVLPDSYIDVKNMDYGGDKYIN 169

Query: 178 GEIIPSKYPTYQPKRSGGSRNDSRRYERKRDGPP-TDRRRPKQEAETTSKDSSST 231
           GEIIP KYPTYQPKRS GS+ND +RYER+RDGPP   R++P+Q  ET + DSSST
Sbjct: 170 GEIIPCKYPTYQPKRS-GSKNDGKRYERRRDGPPAAGRQKPRQ--ETAASDSSST 221


>Medtr4g120340.1 | plastid developmental protein DAG | HC |
           chr4:49892396-49894453 | 20130731
          Length = 263

 Score =  159 bits (402), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 68/110 (61%), Positives = 87/110 (79%)

Query: 73  RETIMLPGCDYNHWLIVMEFPKDPAPSREQMIETYLFTLSTVLGSMEEAKKNMYAFSTTT 132
           +ETI+L GCDY HWLI+MEFP +P PS ++M+ +Y+ TL+ VLGS EEAKK +Y+ ST+T
Sbjct: 79  KETILLDGCDYEHWLIIMEFPDNPKPSEDEMVNSYVKTLAQVLGSEEEAKKKIYSVSTST 138

Query: 133 YTGFQCTVDEATSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYINGEIIP 182
           Y GF   V E  S K K LPGVLWVLPDSY+DV NKDYGGD +++G++IP
Sbjct: 139 YIGFGALVSEELSYKIKELPGVLWVLPDSYLDVPNKDYGGDLFVDGKVIP 188


>Medtr2g006210.1 | plastid developmental protein DAG, putative | HC
           | chr2:499629-496731 | 20130731
          Length = 489

 Score =  147 bits (370), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 73/130 (56%), Positives = 92/130 (70%), Gaps = 2/130 (1%)

Query: 74  ETIMLPGCDYNHWLIVMEFPKDPAPSREQMIETYLFTLSTVLG-SMEEAKKNMYAFSTTT 132
           +TI+  GCDYNHWL V +FP+D  P  E+MI  Y  T +  L  S+EEAKK +YA STTT
Sbjct: 115 DTILFEGCDYNHWLFVCDFPRDNKPPPEEMIRIYEETCAKGLNISVEEAKKKIYACSTTT 174

Query: 133 YTGFQCTVDEATSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYINGEIIPSKYPTYQPKR 192
           YTGFQ  + E  S+KF+G+PGV++VLPDSYID  NK YGGD+YI G+IIP + P  Q  R
Sbjct: 175 YTGFQAVMTEEESKKFEGIPGVIFVLPDSYIDPVNKQYGGDQYIEGQIIP-RPPPVQFGR 233

Query: 193 SGGSRNDSRR 202
           + G R D R+
Sbjct: 234 NLGGRRDYRQ 243


>Medtr1g041745.1 | plastid developmental protein DAG | HC |
           chr1:15695728-15692169 | 20130731
          Length = 217

 Score =  144 bits (362), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 70/139 (50%), Positives = 91/139 (65%), Gaps = 7/139 (5%)

Query: 77  MLPGCDYNHWLIVMEFPKDPAPSREQMIETYLFTLSTVLGSMEEAKKNMYAFSTTTYTGF 136
           + PGCDY HWLIVM+ P     S++QMI+ Y+ TL+ VLGS EEAKK +Y  S   Y GF
Sbjct: 76  LFPGCDYEHWLIVMDKPGGEGASKQQMIDCYVQTLAKVLGSEEEAKKKIYNVSCERYFGF 135

Query: 137 QCTVDEATSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYINGEIIP-----SKYPTYQPK 191
            C +DE TS K +GLPGVL+VLPDSY+D +NKDYG + ++NGEI+       K    QP+
Sbjct: 136 GCEIDEETSNKLEGLPGVLFVLPDSYVDPENKDYGAELFVNGEIVQRSPERQKRVEPQPQ 195

Query: 192 RSGG--SRNDSRRYERKRD 208
           R       ND  RY R+++
Sbjct: 196 RHQDRPRYNDRTRYVRRKE 214


>Medtr1g075460.1 | plastid developmental protein DAG | HC |
           chr1:33421296-33424686 | 20130731
          Length = 235

 Score =  140 bits (354), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 66/139 (47%), Positives = 96/139 (69%), Gaps = 7/139 (5%)

Query: 77  MLPGCDYNHWLIVMEFPKDPAPSREQMIETYLFTLSTVLGSMEEAKKNMYAFSTTTYTGF 136
           + PGCDYNHWLI+++ P     +++QMI+ Y+ TL+ VLGS EEAKK +Y  S   Y GF
Sbjct: 94  LFPGCDYNHWLIIIDKPGGEGATKQQMIDCYVKTLAQVLGSEEEAKKKIYNVSCERYFGF 153

Query: 137 QCTVDEATSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYINGEII---PSKYPTYQPK-R 192
            C +DE TS K +G+PGVL+VLPDSY+D +++DYG + ++NGEI+   P +    +P+ +
Sbjct: 154 GCELDEETSNKLEGIPGVLFVLPDSYVDPEHQDYGAELFVNGEIVQRSPERQRRVEPQAQ 213

Query: 193 SGGSR---NDSRRYERKRD 208
            G SR   +D  +Y R+RD
Sbjct: 214 RGDSRPRYHDRTKYVRRRD 232


>Medtr1g075460.2 | plastid developmental protein DAG | HC |
           chr1:33421296-33424686 | 20130731
          Length = 235

 Score =  140 bits (354), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 66/139 (47%), Positives = 96/139 (69%), Gaps = 7/139 (5%)

Query: 77  MLPGCDYNHWLIVMEFPKDPAPSREQMIETYLFTLSTVLGSMEEAKKNMYAFSTTTYTGF 136
           + PGCDYNHWLI+++ P     +++QMI+ Y+ TL+ VLGS EEAKK +Y  S   Y GF
Sbjct: 94  LFPGCDYNHWLIIIDKPGGEGATKQQMIDCYVKTLAQVLGSEEEAKKKIYNVSCERYFGF 153

Query: 137 QCTVDEATSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYINGEII---PSKYPTYQPK-R 192
            C +DE TS K +G+PGVL+VLPDSY+D +++DYG + ++NGEI+   P +    +P+ +
Sbjct: 154 GCELDEETSNKLEGIPGVLFVLPDSYVDPEHQDYGAELFVNGEIVQRSPERQRRVEPQAQ 213

Query: 193 SGGSR---NDSRRYERKRD 208
            G SR   +D  +Y R+RD
Sbjct: 214 RGDSRPRYHDRTKYVRRRD 232


>Medtr1g041745.2 | plastid developmental protein DAG | HC |
           chr1:15695728-15692740 | 20130731
          Length = 178

 Score =  129 bits (325), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 64/126 (50%), Positives = 80/126 (63%), Gaps = 6/126 (4%)

Query: 52  TRIRAALDEDYSAKRSSSSEQRE------TIMLPGCDYNHWLIVMEFPKDPAPSREQMIE 105
            R+  A +  YS   S +S   E        + PGCDY HWLIVM+ P     S++QMI+
Sbjct: 45  CRVNRAGNSTYSPLNSGNSNFSERPPTDMAPLFPGCDYEHWLIVMDKPGGEGASKQQMID 104

Query: 106 TYLFTLSTVLGSMEEAKKNMYAFSTTTYTGFQCTVDEATSEKFKGLPGVLWVLPDSYIDV 165
            Y+ TL+ VLGS EEAKK +Y  S   Y GF C +DE TS K +GLPGVL+VLPDSY+D 
Sbjct: 105 CYVQTLAKVLGSEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDP 164

Query: 166 KNKDYG 171
           +NKDYG
Sbjct: 165 ENKDYG 170


>Medtr2g078090.1 | plastid developmental protein DAG | HC |
           chr2:32418788-32422274 | 20130731
          Length = 375

 Score =  126 bits (317), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 59/119 (49%), Positives = 84/119 (70%), Gaps = 6/119 (5%)

Query: 73  RETIMLPGCDYNHWLIVMEFPKDPAPSREQMIETYLFTLSTVLGSMEEAKKNMYAFSTTT 132
           +ETI+L GCD+ HWL+VME P+   P+R+++I++Y+ TL+ V+GS EEA+K++Y+ ST  
Sbjct: 85  KETILLDGCDFEHWLVVMEKPEG-DPTRDEIIDSYIKTLAEVIGSEEEARKSIYSVSTRH 143

Query: 133 YTGFQCTVDEATSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYINGEIIPSKYPTYQPK 191
           Y  F     E  S K K LP V WVLPDSY++V+ KDYGG+ +ING+ +P     Y PK
Sbjct: 144 YFAFGALCSEELSYKLKELPKVRWVLPDSYLNVREKDYGGEPFINGQAVP-----YDPK 197


>Medtr1g009840.1 | plastid developmental protein DAG | HC |
           chr1:1542198-1544398 | 20130731
          Length = 327

 Score =  124 bits (312), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 67/155 (43%), Positives = 95/155 (61%), Gaps = 12/155 (7%)

Query: 68  SSSEQRETIMLPGCDYNHWLIVMEFPKDPAPSREQMIETYLFTLSTVLGSMEEAKKNMYA 127
           S+   +ETI+L GCD+ HWL++ME P   A +R+++I+ Y+ T + V+G+ E A+KN+Y+
Sbjct: 72  SNPSPKETILLDGCDFEHWLVIMETPDGDA-TRDEIIDGYIKTFAEVIGNEELARKNIYS 130

Query: 128 FSTTTYTGFQCTVDEATSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYINGEIIPSKYPT 187
            ST  Y  F     E  S K   LP V WVLPDSY++VK KDYGG+ +ING+ +P     
Sbjct: 131 VSTRHYFAFGAVCSEELSYKLNELPKVRWVLPDSYLNVKEKDYGGEPFINGQAVP----- 185

Query: 188 YQPK-RSGGSRNDSRRYERK-RDGPPTDRRRPKQE 220
           Y PK      RN++R  ER  R+G    R RP+  
Sbjct: 186 YDPKYHEEWVRNNARANERNGRNG----RDRPRNN 216


>Medtr2g006240.1 | plastid developmental protein DAG, putative | LC
           | chr2:510183-509161 | 20130731
          Length = 188

 Score = 97.8 bits (242), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 48/91 (52%), Positives = 60/91 (65%), Gaps = 1/91 (1%)

Query: 80  GCDYNHWLIVMEFPKDPAPSREQMIETYLFTLSTVLG-SMEEAKKNMYAFSTTTYTGFQC 138
           GCDYNHW IV +FPKD  P+ E+MI  Y  T +  L   +EEAKK +YA  TTTY GFQ 
Sbjct: 86  GCDYNHWFIVFDFPKDNKPTPEEMIRLYEETCAKGLNIRVEEAKKKIYACKTTTYPGFQA 145

Query: 139 TVDEATSEKFKGLPGVLWVLPDSYIDVKNKD 169
            + E  S+KF+G+PGV+ VLPD    + NK 
Sbjct: 146 VMTEEESKKFEGMPGVIHVLPDYNTALVNKQ 176


>Medtr6g043040.1 | plastid developmental protein DAG | LC |
           chr6:14846758-14845642 | 20130731
          Length = 173

 Score = 89.7 bits (221), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 40/98 (40%), Positives = 61/98 (62%), Gaps = 1/98 (1%)

Query: 80  GCDYNHWLIVMEFPKDPAPSREQMIETYLFTLSTVLGSMEEAKKNMYA-FSTTTYTGFQC 138
           G DY HW+I M+ P     S ++ I+ Y+ TL  VLGS+ EAKK +Y+ +      GF C
Sbjct: 72  GLDYKHWVIAMDNPGGKDSSWQEKIDCYIQTLGHVLGSVVEAKKKIYSVYCFKKEFGFGC 131

Query: 139 TVDEATSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYI 176
            +DE T      +PGV+++LPD Y+D++ K YGG+ ++
Sbjct: 132 EIDEQTKNNLGVMPGVMFILPDVYMDIQKKYYGGEDFV 169


>Medtr1g092860.1 | RNA-binding (RRM/RBD/RNP motif) family protein,
           putative | HC | chr1:41816599-41813158 | 20130731
          Length = 284

 Score = 74.3 bits (181), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 62/112 (55%)

Query: 72  QRETIMLPGCDYNHWLIVMEFPKDPAPSREQMIETYLFTLSTVLGSMEEAKKNMYAFSTT 131
           Q + ++ P  +  HW++ M+ P     ++ Q+++ Y   L+ ++G+ ++A+  +Y  S  
Sbjct: 68  QTDMLLFPNGNSKHWVVRMDKPAVGVVTKAQIVDHYAQILTKIMGNEKDAQMCIYHVSWK 127

Query: 132 TYTGFQCTVDEATSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYINGEIIPS 183
           T  GF C +DE  + +  G+PGVL V PD   + +NKDY G    N   +P+
Sbjct: 128 TNFGFCCELDEDCAHELSGVPGVLSVQPDDNFESENKDYEGRNLENSLNMPN 179