Miyakogusa Predicted Gene

Lj6g3v2118950.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2118950.2 Non Characterized Hit- tr|I1ME83|I1ME83_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.55662
PE,85.78,0,SUBFAMILY NOT NAMED,NULL; UBIQUITIN THIOLESTERASE PROTEIN
OTUB,NULL; Peptidase_C65,Peptidase C65, ot,CUFF.60681.2
         (217 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g011420.1 | otubain-like cysteine protease, putative | HC ...   381   e-106
Medtr2g011420.2 | otubain-like cysteine protease, putative | HC ...   356   8e-99

>Medtr2g011420.1 | otubain-like cysteine protease, putative | HC |
           chr2:2775319-2769340 | 20130731
          Length = 298

 Score =  381 bits (978), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 186/223 (83%), Positives = 200/223 (89%), Gaps = 6/223 (2%)

Query: 1   MQNKEAVSEDGEIG------SEWNNFGDDDIMQQQHSIQADQANKVPFVGDKEPLSSLAA 54
           M+NKE V +DGE+       S W NF DDD+MQQQ SIQ D+A K PFVGDKEPLSSLAA
Sbjct: 1   MRNKELVLDDGEVEYEAGPESAWGNFEDDDVMQQQSSIQDDEAKKFPFVGDKEPLSSLAA 60

Query: 55  EYQSGSAILLEKIKVLDQQYAAIRRTRGDGNCFFRGFMFSYLEHVLVSQDQAEIDRIQAN 114
           EYQSGS ILLEKIKVLD QYAAIRRTRGDGNCFFRGFMFSYLEH+L +QD AEIDRI+AN
Sbjct: 61  EYQSGSPILLEKIKVLDGQYAAIRRTRGDGNCFFRGFMFSYLEHILEAQDSAEIDRIKAN 120

Query: 115 VEKSRTALQTLGYTELTFEDFFSLFIEQLESVIQGKETSISHEELVLRSRDQSISDYVVM 174
           VE+SR ALQTLGY ELTFEDFF+LF+EQLE VIQGKETSISHEELVLRSRDQS+SDYVVM
Sbjct: 121 VERSRKALQTLGYAELTFEDFFTLFLEQLEDVIQGKETSISHEELVLRSRDQSVSDYVVM 180

Query: 175 FFRFVTSAEIQKRSEFFEPFILGLTNTTVEQFCKSSVEPMGEE 217
           FFRFVTSAEIQKRSEFFEPFI+GLTNTTVEQFCKS+VEPMGEE
Sbjct: 181 FFRFVTSAEIQKRSEFFEPFIMGLTNTTVEQFCKSAVEPMGEE 223


>Medtr2g011420.2 | otubain-like cysteine protease, putative | HC |
           chr2:2775319-2769340 | 20130731
          Length = 220

 Score =  356 bits (914), Expect = 8e-99,   Method: Compositional matrix adjust.
 Identities = 175/211 (82%), Positives = 188/211 (89%), Gaps = 6/211 (2%)

Query: 1   MQNKEAVSEDGEIGSE------WNNFGDDDIMQQQHSIQADQANKVPFVGDKEPLSSLAA 54
           M+NKE V +DGE+  E      W NF DDD+MQQQ SIQ D+A K PFVGDKEPLSSLAA
Sbjct: 1   MRNKELVLDDGEVEYEAGPESAWGNFEDDDVMQQQSSIQDDEAKKFPFVGDKEPLSSLAA 60

Query: 55  EYQSGSAILLEKIKVLDQQYAAIRRTRGDGNCFFRGFMFSYLEHVLVSQDQAEIDRIQAN 114
           EYQSGS ILLEKIKVLD QYAAIRRTRGDGNCFFRGFMFSYLEH+L +QD AEIDRI+AN
Sbjct: 61  EYQSGSPILLEKIKVLDGQYAAIRRTRGDGNCFFRGFMFSYLEHILEAQDSAEIDRIKAN 120

Query: 115 VEKSRTALQTLGYTELTFEDFFSLFIEQLESVIQGKETSISHEELVLRSRDQSISDYVVM 174
           VE+SR ALQTLGY ELTFEDFF+LF+EQLE VIQGKETSISHEELVLRSRDQS+SDYVVM
Sbjct: 121 VERSRKALQTLGYAELTFEDFFTLFLEQLEDVIQGKETSISHEELVLRSRDQSVSDYVVM 180

Query: 175 FFRFVTSAEIQKRSEFFEPFILGLTNTTVEQ 205
           FFRFVTSAEIQKRSEFFEPFI+GLTNTTVEQ
Sbjct: 181 FFRFVTSAEIQKRSEFFEPFIMGLTNTTVEQ 211