Miyakogusa Predicted Gene

Lj6g3v2083610.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2083610.1 Non Characterized Hit- tr|G7I3G5|G7I3G5_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,84.21,2e-19,Pcc1,EKC/KEOPS complex, subunit
Pcc1,CUFF.60650.1
         (95 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g091850.1 | transcription factor Pcc1 | HC | chr3:41910531...   157   2e-39
Medtr3g091850.3 | transcription factor Pcc1 | HC | chr3:41910384...   157   2e-39
Medtr3g091850.2 | transcription factor Pcc1 | HC | chr3:41910515...   157   2e-39
Medtr1g007870.3 | transcription factor Pcc1 | HC | chr1:604727-6...   154   2e-38
Medtr1g007870.1 | transcription factor Pcc1 | HC | chr1:604727-6...   154   2e-38
Medtr1g007870.2 | transcription factor Pcc1 | HC | chr1:604727-6...   154   2e-38

>Medtr3g091850.1 | transcription factor Pcc1 | HC |
          chr3:41910531-41907589 | 20130731
          Length = 95

 Score =  157 bits (398), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 79/95 (83%), Positives = 81/95 (85%)

Query: 1  MDTTQVTKCQWDFSCGLEVDFGSEENASIAYAALAVDKELQPDKVKRLMTVSDGKLSVRF 60
          MD T   + QWDFSC L VDFGSEENASI YA L VDKELQPDKVKRL TVS+GKLSV F
Sbjct: 1  MDATPDAQSQWDFSCDLVVDFGSEENASIVYATLMVDKELQPDKVKRLTTVSNGKLSVHF 60

Query: 61 EATEARFLRASFSAFVDVLILATKTIEEFGPGMEL 95
          EATEARFLRASFSAFVDVL LATKTIEEFG GMEL
Sbjct: 61 EATEARFLRASFSAFVDVLTLATKTIEEFGQGMEL 95


>Medtr3g091850.3 | transcription factor Pcc1 | HC |
          chr3:41910384-41907589 | 20130731
          Length = 95

 Score =  157 bits (398), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 79/95 (83%), Positives = 81/95 (85%)

Query: 1  MDTTQVTKCQWDFSCGLEVDFGSEENASIAYAALAVDKELQPDKVKRLMTVSDGKLSVRF 60
          MD T   + QWDFSC L VDFGSEENASI YA L VDKELQPDKVKRL TVS+GKLSV F
Sbjct: 1  MDATPDAQSQWDFSCDLVVDFGSEENASIVYATLMVDKELQPDKVKRLTTVSNGKLSVHF 60

Query: 61 EATEARFLRASFSAFVDVLILATKTIEEFGPGMEL 95
          EATEARFLRASFSAFVDVL LATKTIEEFG GMEL
Sbjct: 61 EATEARFLRASFSAFVDVLTLATKTIEEFGQGMEL 95


>Medtr3g091850.2 | transcription factor Pcc1 | HC |
          chr3:41910515-41907589 | 20130731
          Length = 95

 Score =  157 bits (398), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 79/95 (83%), Positives = 81/95 (85%)

Query: 1  MDTTQVTKCQWDFSCGLEVDFGSEENASIAYAALAVDKELQPDKVKRLMTVSDGKLSVRF 60
          MD T   + QWDFSC L VDFGSEENASI YA L VDKELQPDKVKRL TVS+GKLSV F
Sbjct: 1  MDATPDAQSQWDFSCDLVVDFGSEENASIVYATLMVDKELQPDKVKRLTTVSNGKLSVHF 60

Query: 61 EATEARFLRASFSAFVDVLILATKTIEEFGPGMEL 95
          EATEARFLRASFSAFVDVL LATKTIEEFG GMEL
Sbjct: 61 EATEARFLRASFSAFVDVLTLATKTIEEFGQGMEL 95


>Medtr1g007870.3 | transcription factor Pcc1 | HC |
          chr1:604727-606101 | 20130731
          Length = 93

 Score =  154 bits (388), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 74/89 (83%), Positives = 80/89 (89%)

Query: 7  TKCQWDFSCGLEVDFGSEENASIAYAALAVDKELQPDKVKRLMTVSDGKLSVRFEATEAR 66
          ++ QWDF+  LEVDFGS+ENASI YAALAVDKELQP+KVKR+M VSDGKLSV FEA EAR
Sbjct: 5  SQSQWDFTSDLEVDFGSQENASIVYAALAVDKELQPNKVKRIMAVSDGKLSVHFEAIEAR 64

Query: 67 FLRASFSAFVDVLILATKTIEEFGPGMEL 95
          FLRASFSAFVDVL LATKTIEEFG GMEL
Sbjct: 65 FLRASFSAFVDVLTLATKTIEEFGQGMEL 93


>Medtr1g007870.1 | transcription factor Pcc1 | HC |
          chr1:604727-606101 | 20130731
          Length = 93

 Score =  154 bits (388), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 74/89 (83%), Positives = 80/89 (89%)

Query: 7  TKCQWDFSCGLEVDFGSEENASIAYAALAVDKELQPDKVKRLMTVSDGKLSVRFEATEAR 66
          ++ QWDF+  LEVDFGS+ENASI YAALAVDKELQP+KVKR+M VSDGKLSV FEA EAR
Sbjct: 5  SQSQWDFTSDLEVDFGSQENASIVYAALAVDKELQPNKVKRIMAVSDGKLSVHFEAIEAR 64

Query: 67 FLRASFSAFVDVLILATKTIEEFGPGMEL 95
          FLRASFSAFVDVL LATKTIEEFG GMEL
Sbjct: 65 FLRASFSAFVDVLTLATKTIEEFGQGMEL 93


>Medtr1g007870.2 | transcription factor Pcc1 | HC |
          chr1:604727-606101 | 20130731
          Length = 93

 Score =  154 bits (388), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 74/89 (83%), Positives = 80/89 (89%)

Query: 7  TKCQWDFSCGLEVDFGSEENASIAYAALAVDKELQPDKVKRLMTVSDGKLSVRFEATEAR 66
          ++ QWDF+  LEVDFGS+ENASI YAALAVDKELQP+KVKR+M VSDGKLSV FEA EAR
Sbjct: 5  SQSQWDFTSDLEVDFGSQENASIVYAALAVDKELQPNKVKRIMAVSDGKLSVHFEAIEAR 64

Query: 67 FLRASFSAFVDVLILATKTIEEFGPGMEL 95
          FLRASFSAFVDVL LATKTIEEFG GMEL
Sbjct: 65 FLRASFSAFVDVLTLATKTIEEFGQGMEL 93