Miyakogusa Predicted Gene

Lj6g3v2055740.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2055740.1 Non Characterized Hit- tr|I3T4M7|I3T4M7_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.67,0,Lissencephaly type-1-like homology motif,LisH
dimerisation motif; C-terminal to LisH motif.,CTLH, C-,CUFF.60608.1
         (226 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g012810.1 | LisH and RanBPM domain protein | HC | chr2:330...   408   e-114
Medtr2g012810.2 | LisH and RanBPM domain protein | HC | chr2:330...   359   e-99 
Medtr1g019870.1 | LisH and RanBPM domain protein | HC | chr1:606...    76   3e-14
Medtr4g032800.1 | SPla/RYanodine receptor (SPRY) domain protein ...    49   5e-06

>Medtr2g012810.1 | LisH and RanBPM domain protein | HC |
           chr2:3306938-3301342 | 20130731
          Length = 241

 Score =  408 bits (1049), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 201/223 (90%), Positives = 207/223 (92%)

Query: 1   MAASKKVITREEWEKKLNDVKIRKEDMNKLVMNFLVTEGYVEAAEKFRKESGTEPDIDLA 60
           MAASKKVITREEWEKKLN+VKIRKEDMNKLVMNFLVTEG+V+AAEKFRKESGTEPDIDLA
Sbjct: 17  MAASKKVITREEWEKKLNNVKIRKEDMNKLVMNFLVTEGFVDAAEKFRKESGTEPDIDLA 76

Query: 61  TITDRMAVKKAVQSGNVEDAIEKVNDLNPEILDTNPQLFFHLQQQRLIELIRNGKVXXXX 120
           TITDRMAVKKAVQSGNVEDAIEKVNDLNPEILDTNPQLFFHLQQQRLIELIRNGK+    
Sbjct: 77  TITDRMAVKKAVQSGNVEDAIEKVNDLNPEILDTNPQLFFHLQQQRLIELIRNGKIEEAL 136

Query: 121 XXXXXXXXPRGEENHSFLEELERTVALLAFEDVSNCPVGELLDISQRLKTASEVNAAILT 180
                   PRGEEN SFLEELERTVALLAFEDVSNCPVGELLDISQRLKTASEVNAAILT
Sbjct: 137 EFAQEELAPRGEENQSFLEELERTVALLAFEDVSNCPVGELLDISQRLKTASEVNAAILT 196

Query: 181 SQSHEKDPKLPSLLKMLIWAQNQLDEKAAYPHINDISKATLED 223
           SQSHEKDPKLPSLLKMLIWAQNQLDEKAA+P IND+S A LED
Sbjct: 197 SQSHEKDPKLPSLLKMLIWAQNQLDEKAAFPRINDLSTAALED 239


>Medtr2g012810.2 | LisH and RanBPM domain protein | HC |
           chr2:3305823-3301342 | 20130731
          Length = 199

 Score =  359 bits (922), Expect = e-99,   Method: Compositional matrix adjust.
 Identities = 176/197 (89%), Positives = 181/197 (91%)

Query: 27  MNKLVMNFLVTEGYVEAAEKFRKESGTEPDIDLATITDRMAVKKAVQSGNVEDAIEKVND 86
           MNKLVMNFLVTEG+V+AAEKFRKESGTEPDIDLATITDRMAVKKAVQSGNVEDAIEKVND
Sbjct: 1   MNKLVMNFLVTEGFVDAAEKFRKESGTEPDIDLATITDRMAVKKAVQSGNVEDAIEKVND 60

Query: 87  LNPEILDTNPQLFFHLQQQRLIELIRNGKVXXXXXXXXXXXXPRGEENHSFLEELERTVA 146
           LNPEILDTNPQLFFHLQQQRLIELIRNGK+            PRGEEN SFLEELERTVA
Sbjct: 61  LNPEILDTNPQLFFHLQQQRLIELIRNGKIEEALEFAQEELAPRGEENQSFLEELERTVA 120

Query: 147 LLAFEDVSNCPVGELLDISQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLIWAQNQLDE 206
           LLAFEDVSNCPVGELLDISQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLIWAQNQLDE
Sbjct: 121 LLAFEDVSNCPVGELLDISQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLIWAQNQLDE 180

Query: 207 KAAYPHINDISKATLED 223
           KAA+P IND+S A LED
Sbjct: 181 KAAFPRINDLSTAALED 197


>Medtr1g019870.1 | LisH and RanBPM domain protein | HC |
           chr1:6062059-6066368 | 20130731
          Length = 216

 Score = 75.9 bits (185), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 96/196 (48%), Gaps = 2/196 (1%)

Query: 15  KKLNDVKIRKEDMNKLVMNFLVTEGYVEAAEKFRKESGTEPDID-LATITDRMAVKKAVQ 73
           ++ +++ I ++D++ +V+++L+   Y E+AE F   +G +   D L  +  R  +  +V 
Sbjct: 6   RQYDNIAISEKDVSNIVLSYLIHNCYEESAESFMAGTGAKRPTDYLDNMEKRKKIFHSVL 65

Query: 74  SGNVEDAIEKVNDLNPEILDTNPQLFFHLQQQRLIELIRNGKVXXXXXXXXXXXXPRGEE 133
            GN   AIE    L PEIL  N  L F L     +EL+R+ K             P G++
Sbjct: 66  EGNALKAIELTEQLTPEILVKNTDLLFDLLSLHFVELVRSRKCTEALDFAQTKLSPFGKD 125

Query: 134 NHSFLEELERTVALLAFEDVSNCPVGELLDISQRLKTASEVNAAILTSQSHEKDPKLPSL 193
              + E+L+  +ALLA+++  + P+  LL +  R + A  +N  IL   +      +  L
Sbjct: 126 GQ-YTEKLQDFMALLAYKEPEDSPMFHLLSLEYRQELADSLNRTILAYFNLPNYTAMEKL 184

Query: 194 LKMLIWAQNQLDEKAA 209
           ++     +  L+E+A 
Sbjct: 185 IQQTTVVRQCLNEEAG 200


>Medtr4g032800.1 | SPla/RYanodine receptor (SPRY) domain protein |
           HC | chr4:11335272-11345067 | 20130731
          Length = 468

 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 48/187 (25%), Positives = 83/187 (44%), Gaps = 17/187 (9%)

Query: 10  REEWEKKLNDVKIRKEDMNKLVMNFLVTEGYVEAAEKFRKES-GTEPDIDLA-------- 60
           R + + K+ +V +       +V ++L+  GY +    F + S  T P I++         
Sbjct: 232 RMKQQIKIEEVPVSPNASYGIVRSYLLHYGYEDTLNSFDEASRSTIPPINIVQENGIDDQ 291

Query: 61  ----TITDRMAVKKAVQSGNVEDAIEKVNDLNPEILDTNPQ-LFFHLQQQRLIELIRNGK 115
                +  R  +++ ++ G ++ A  K+ +  P+I + N   + F L  Q+ IEL+R G 
Sbjct: 292 ETTYALNHRKTLRQLIRDGEIDAAFGKLREWYPQIAEDNTSAMCFLLHCQKFIELVRVGA 351

Query: 116 VXXXXXXXXXXXXPRGEENHSFLEEL-ERTVALLAFEDVSNCPVGELLDISQRLKTASEV 174
           +                   S  E++ +  VALLA+E      VG LL  SQR   A  V
Sbjct: 352 LEEAVKYGRIELSSF--FGLSLFEDIVQDCVALLAYERPLESAVGYLLKDSQREVVADAV 409

Query: 175 NAAILTS 181
           NA IL++
Sbjct: 410 NAMILST 416