Miyakogusa Predicted Gene

Lj6g3v2043190.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2043190.1 Non Characterized Hit- tr|I3SQJ0|I3SQJ0_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.08,0,seg,NULL;
SPHINGOLIPID DELTA 4 DESATURASE/C-4 HYDROXYLASE PROTEIN DES2,NULL;
FA_desaturase,Fatty aci,CUFF.60568.1
         (327 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g013070.1 | sphingolipid delta desaturase | HC | chr2:3452...   600   e-172

>Medtr2g013070.1 | sphingolipid delta desaturase | HC |
           chr2:3452831-3450592 | 20130731
          Length = 328

 Score =  600 bits (1547), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 289/315 (91%), Positives = 300/315 (95%)

Query: 13  VVMAGDFFWSYTDEPHASRRRQILSKYPQIKQLFGPDHSAFFKISGVVLLQLGTATLLQD 72
           V+MAGDFFWSYTDEPHASRRRQILSKYP IKQLFGPD  AFFKIS VVLLQLGTA LL+D
Sbjct: 14  VMMAGDFFWSYTDEPHASRRRQILSKYPHIKQLFGPDPFAFFKISVVVLLQLGTAVLLKD 73

Query: 73  AGWLKILLVAYFFGSFLNHNLFLAIHELSHNLAFSTPALNRWLGIFANLPIGVPMSVTFQ 132
           AG LKILLVAYFFGSFLNHNLFLAIHELSHNLAFSTP  NRWLGIFANLPIGVPMSVTFQ
Sbjct: 74  AGRLKILLVAYFFGSFLNHNLFLAIHELSHNLAFSTPVYNRWLGIFANLPIGVPMSVTFQ 133

Query: 133 KYHLEHHRFQGVDGIDMDIPSLAEAHVVTNVFAKTIWVFLQLFFYAFRPLFLKPKPPGIW 192
           KYHLEHHRFQGVDG+DMDIPS  EAHVVTNV AKTIWVFLQLFFYAFRPLFLKPKPPGIW
Sbjct: 134 KYHLEHHRFQGVDGVDMDIPSHMEAHVVTNVLAKTIWVFLQLFFYAFRPLFLKPKPPGIW 193

Query: 193 EFINFSVQIALDVAMVYFWGWKSLAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSY 252
           EFINFSVQIALDV+MVYFWGWKSLAYLIL+TFVGGGMHPMAGHFISEHYVFNP+QETYSY
Sbjct: 194 EFINFSVQIALDVSMVYFWGWKSLAYLILATFVGGGMHPMAGHFISEHYVFNPEQETYSY 253

Query: 253 YGPLNLVTWHVGYHNEHHDFPRIPGNKLHKVKEIAPEYYDELASYKSWSQVIYMYLMDRT 312
           YGPLNL+TWHVGYHNEHHDFPRIPGNKLHKVKEIAPEYYD L+ YKSWSQVIYMY+ DRT
Sbjct: 254 YGPLNLLTWHVGYHNEHHDFPRIPGNKLHKVKEIAPEYYDSLSHYKSWSQVIYMYITDRT 313

Query: 313 VGPFSRMKRKPGKTE 327
           +GP+SRMKRKP KTE
Sbjct: 314 IGPYSRMKRKPSKTE 328