Miyakogusa Predicted Gene

Lj6g3v2043170.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2043170.1 Non Characterized Hit- tr|Q67YU2|Q67YU2_ARATH
Putative uncharacterized protein At4g21720
OS=Arabidop,62.32,1e-17,seg,NULL,CUFF.60567.1
         (148 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g088930.1 | hypothetical protein | HC | chr4:35523977-3552...   201   2e-52

>Medtr4g088930.1 | hypothetical protein | HC |
           chr4:35523977-35526747 | 20130731
          Length = 144

 Score =  201 bits (512), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 88/106 (83%), Positives = 104/106 (98%)

Query: 14  MMPQQWASPCGNQCTHKYAALTQIPWRVFCKKGCNSDGETWEECLEECDHICYKDPVLKD 73
           M+PQQWASPCGN+CT+KYAALT++PWRVFCKKGCNSDGETWEECLE+C+ +CYKDPVLKD
Sbjct: 1   MIPQQWASPCGNKCTNKYAALTKLPWRVFCKKGCNSDGETWEECLEDCNQLCYKDPVLKD 60

Query: 74  QKWSAYIDRSPGAASYSEECFHACVSGCGYKFEVQQEKAEKICPNR 119
           Q+WSAYIDRSPG+A+YSEECFHACVSGCGYKFEV+ ++A+K+CPNR
Sbjct: 61  QQWSAYIDRSPGSATYSEECFHACVSGCGYKFEVKPDEADKVCPNR 106