Miyakogusa Predicted Gene
- Lj6g3v2041930.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v2041930.1 Non Characterized Hit- tr|F6HLI0|F6HLI0_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,46.94,5e-19,seg,NULL; ZF_RING_1,Zinc finger, RING-type, conserved
site; zf-C3HC4_2,NULL; no description,Zinc fin,CUFF.60556.1
(245 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g013550.2 | E3 ubiquitin-protein ligase RMA1H1-like protei... 285 3e-77
Medtr2g013550.1 | E3 ubiquitin-protein ligase RMA1H1-like protei... 285 3e-77
Medtr2g013550.3 | E3 ubiquitin-protein ligase RMA1H1-like protei... 285 3e-77
Medtr4g088875.1 | E3 ubiquitin-protein ligase RMA1H1-like protei... 221 6e-58
Medtr4g088870.1 | E3 ubiquitin-protein ligase RMA1H1-like protei... 177 7e-45
Medtr8g465910.1 | E3 ubiquitin-protein ligase RMA1H1-like protei... 156 2e-38
Medtr2g090295.1 | E3 ubiquitin-protein ligase RMA1H1-like protei... 153 2e-37
Medtr2g090325.1 | zinc finger, C3HC4 type (RING finger) protein ... 109 2e-24
Medtr7g093390.2 | zinc finger, C3HC4 type (RING finger) protein ... 104 6e-23
Medtr7g093390.3 | zinc finger, C3HC4 type (RING finger) protein ... 104 6e-23
Medtr7g093390.1 | zinc finger, C3HC4 type (RING finger) protein ... 104 6e-23
Medtr7g093390.4 | zinc finger, C3HC4 type (RING finger) protein ... 104 6e-23
Medtr2g090330.1 | zinc finger, C3HC4 type (RING finger) protein ... 103 1e-22
Medtr2g090330.2 | zinc finger, C3HC4 type (RING finger) protein ... 103 1e-22
Medtr2g090330.3 | zinc finger, C3HC4 type (RING finger) protein ... 103 2e-22
Medtr1g021895.1 | zinc finger, C3HC4 type (RING finger) protein ... 95 5e-20
Medtr1g021895.2 | zinc finger, C3HC4 type (RING finger) protein ... 95 5e-20
Medtr1g054465.1 | zinc finger, C3HC4 type (RING finger) protein ... 95 8e-20
Medtr4g029440.2 | zinc finger, C3HC4 type (RING finger) protein ... 94 9e-20
Medtr4g029440.1 | zinc finger, C3HC4 type (RING finger) protein ... 94 9e-20
Medtr5g019300.1 | zinc finger, C3HC4 type (RING finger) protein ... 94 2e-19
Medtr1g054280.1 | zinc finger, C3HC4 type (RING finger) protein ... 91 8e-19
Medtr1g054210.1 | zinc finger, C3HC4 type (RING finger) protein ... 91 1e-18
Medtr1g054260.1 | zinc finger, C3HC4 type (RING finger) protein ... 89 3e-18
Medtr2g061230.1 | zinc finger, C3HC4 type (RING finger) protein ... 74 1e-13
Medtr1g015390.1 | peroxisome biogenesis factor 10 | HC | chr1:38... 65 4e-11
Medtr7g084020.1 | RING finger protein | HC | chr7:32376240-32370... 51 1e-06
>Medtr2g013550.2 | E3 ubiquitin-protein ligase RMA1H1-like protein |
HC | chr2:3664172-3662157 | 20130731
Length = 236
Score = 285 bits (729), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 152/234 (64%), Positives = 173/234 (73%), Gaps = 15/234 (6%)
Query: 1 MAFQHYFSQELKTTPNSVTETESSNGCFDCNICLDIAHEPVVTLCGHLYCWPCIYKWLHV 60
MAF+ FS ELKT PNS++E E SNG FDCNICLD A+EPVVTLCGHLYCWPCIYKWLHV
Sbjct: 1 MAFEDCFSHELKTIPNSMSEAEESNG-FDCNICLDFANEPVVTLCGHLYCWPCIYKWLHV 59
Query: 61 QS-DSLAPDEHPQCPVCKVDISHSTMVPLYGR-GHAPRGGKASCC-DLFTPPRPPASGAQ 117
QS DSL DEHPQCPVCK +ISH+TMVPLYGR GH P GK+SCC D F PPRP ASGAQ
Sbjct: 60 QSDDSLGSDEHPQCPVCKENISHTTMVPLYGRGGHTPPSGKSSCCDDNFVPPRPTASGAQ 119
Query: 118 ALLGTXXXXXXXXXXXXXXYRNPYQGQYFSSPLYQEEDDDATSQMFNLGASTMTTPGSHP 177
ALL T YRNPYQGQY +S Y +++ DATSQM NLGAS MT+ H
Sbjct: 120 ALLAT---ASQSDQHQRLPYRNPYQGQYLNSSSYHQQEGDATSQMLNLGAS-MTSRSRH- 174
Query: 178 HPVVGMFGEMVFARVFGNSENLYANPNSHQLMRSNGSRMRRQEMQADKFLNRIS 231
H VV MF EM+F+ V G+ PNS+Q++ +N SR+RRQE+Q DKFLNRIS
Sbjct: 175 HTVVRMFEEMIFSGVVGHP------PNSYQMVGNNSSRLRRQELQTDKFLNRIS 222
>Medtr2g013550.1 | E3 ubiquitin-protein ligase RMA1H1-like protein |
HC | chr2:3664296-3662157 | 20130731
Length = 236
Score = 285 bits (729), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 152/234 (64%), Positives = 173/234 (73%), Gaps = 15/234 (6%)
Query: 1 MAFQHYFSQELKTTPNSVTETESSNGCFDCNICLDIAHEPVVTLCGHLYCWPCIYKWLHV 60
MAF+ FS ELKT PNS++E E SNG FDCNICLD A+EPVVTLCGHLYCWPCIYKWLHV
Sbjct: 1 MAFEDCFSHELKTIPNSMSEAEESNG-FDCNICLDFANEPVVTLCGHLYCWPCIYKWLHV 59
Query: 61 QS-DSLAPDEHPQCPVCKVDISHSTMVPLYGR-GHAPRGGKASCC-DLFTPPRPPASGAQ 117
QS DSL DEHPQCPVCK +ISH+TMVPLYGR GH P GK+SCC D F PPRP ASGAQ
Sbjct: 60 QSDDSLGSDEHPQCPVCKENISHTTMVPLYGRGGHTPPSGKSSCCDDNFVPPRPTASGAQ 119
Query: 118 ALLGTXXXXXXXXXXXXXXYRNPYQGQYFSSPLYQEEDDDATSQMFNLGASTMTTPGSHP 177
ALL T YRNPYQGQY +S Y +++ DATSQM NLGAS MT+ H
Sbjct: 120 ALLAT---ASQSDQHQRLPYRNPYQGQYLNSSSYHQQEGDATSQMLNLGAS-MTSRSRH- 174
Query: 178 HPVVGMFGEMVFARVFGNSENLYANPNSHQLMRSNGSRMRRQEMQADKFLNRIS 231
H VV MF EM+F+ V G+ PNS+Q++ +N SR+RRQE+Q DKFLNRIS
Sbjct: 175 HTVVRMFEEMIFSGVVGHP------PNSYQMVGNNSSRLRRQELQTDKFLNRIS 222
>Medtr2g013550.3 | E3 ubiquitin-protein ligase RMA1H1-like protein |
HC | chr2:3664165-3662157 | 20130731
Length = 236
Score = 285 bits (729), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 152/234 (64%), Positives = 173/234 (73%), Gaps = 15/234 (6%)
Query: 1 MAFQHYFSQELKTTPNSVTETESSNGCFDCNICLDIAHEPVVTLCGHLYCWPCIYKWLHV 60
MAF+ FS ELKT PNS++E E SNG FDCNICLD A+EPVVTLCGHLYCWPCIYKWLHV
Sbjct: 1 MAFEDCFSHELKTIPNSMSEAEESNG-FDCNICLDFANEPVVTLCGHLYCWPCIYKWLHV 59
Query: 61 QS-DSLAPDEHPQCPVCKVDISHSTMVPLYGR-GHAPRGGKASCC-DLFTPPRPPASGAQ 117
QS DSL DEHPQCPVCK +ISH+TMVPLYGR GH P GK+SCC D F PPRP ASGAQ
Sbjct: 60 QSDDSLGSDEHPQCPVCKENISHTTMVPLYGRGGHTPPSGKSSCCDDNFVPPRPTASGAQ 119
Query: 118 ALLGTXXXXXXXXXXXXXXYRNPYQGQYFSSPLYQEEDDDATSQMFNLGASTMTTPGSHP 177
ALL T YRNPYQGQY +S Y +++ DATSQM NLGAS MT+ H
Sbjct: 120 ALLAT---ASQSDQHQRLPYRNPYQGQYLNSSSYHQQEGDATSQMLNLGAS-MTSRSRH- 174
Query: 178 HPVVGMFGEMVFARVFGNSENLYANPNSHQLMRSNGSRMRRQEMQADKFLNRIS 231
H VV MF EM+F+ V G+ PNS+Q++ +N SR+RRQE+Q DKFLNRIS
Sbjct: 175 HTVVRMFEEMIFSGVVGHP------PNSYQMVGNNSSRLRRQELQTDKFLNRIS 222
>Medtr4g088875.1 | E3 ubiquitin-protein ligase RMA1H1-like protein |
HC | chr4:35472873-35474936 | 20130731
Length = 231
Score = 221 bits (562), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 130/240 (54%), Positives = 149/240 (62%), Gaps = 32/240 (13%)
Query: 1 MAFQH--YFSQELKTTPNSVTETESS-NGCFDCNICLDIAHEPVVTLCGHLYCWPCIYKW 57
MAF+H +F+QE K PNS TETE + + CFDCNICLD AHEPVVTLCGHLYCW CIYKW
Sbjct: 1 MAFEHEDFFTQEWKAIPNSGTETEKNCDSCFDCNICLDFAHEPVVTLCGHLYCWSCIYKW 60
Query: 58 LHVQSDSLAPDEHPQCPVCKVDISHSTMVPLYGRGHA------PRGGKASCCDLFTPPRP 111
L VQS SLAPDE PQCPVCK ISH+ MVPLYGRG K + D+ PPRP
Sbjct: 61 LFVQSASLAPDEPPQCPVCKDGISHTKMVPLYGRGQTLSRCDRDSDAKPTLEDISIPPRP 120
Query: 112 PASGAQALLGTXXXXXXXXXXXXXXYRNPYQGQYFSSPLYQEEDDDATSQMFNLGASTMT 171
PASG Q+LL YRNPYQ Q+ +S YQ+ D T QM NLG T
Sbjct: 121 PASGIQSLLAM-ATSPQNGSRQQLPYRNPYQTQHINSSTYQDND---TPQMHNLG--TFM 174
Query: 172 TPGSHPHPVVGMFGEMVFARVFGNSENLYANPNSHQLMRSNGSRMRRQEMQADKFLNRIS 231
TP +F + VF FGNSE NSH ++ ++ SR RRQEM A+K LNRIS
Sbjct: 175 TP---------LFPQFVFG--FGNSE------NSHHMVGNSSSRWRRQEMLANKSLNRIS 217
>Medtr4g088870.1 | E3 ubiquitin-protein ligase RMA1H1-like protein |
HC | chr4:35466967-35468099 | 20130731
Length = 199
Score = 177 bits (449), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 111/240 (46%), Positives = 133/240 (55%), Gaps = 64/240 (26%)
Query: 1 MAFQH--YFSQELKTTPNSVTETESSN--GCFDCNICLDIAHEPVVTLCGHLYCWPCIYK 56
M F+H +F+QE K NSVTETE N CFDC+ICLD AHEPVVTLCGHL+CW CIYK
Sbjct: 1 MDFEHEEFFNQEWKADGNSVTETEKENIDNCFDCHICLDFAHEPVVTLCGHLFCWSCIYK 60
Query: 57 WLHVQSDSLAPDEHPQCPVCKVDISHSTMVPLYGRGHAP-----RGGKASCCDLFTPPRP 111
WL VQ SLAPDEHPQCPVCK DISH+ MVPLYGRG R KA+ D+ PPRP
Sbjct: 61 WLFVQRASLAPDEHPQCPVCKHDISHTKMVPLYGRGQTLSSRRGRNRKATLEDISIPPRP 120
Query: 112 PASGAQALLGTXXXXXXXXXXXXXXYRNPYQGQYFSSPLYQEEDDDATSQMFNLGASTMT 171
PAS Q+LL T +P Q QE+++D TSQ+ NL T+
Sbjct: 121 PASEIQSLLETRT--------------SPQSDQ-------QEQENDDTSQVQNL--DTLV 157
Query: 172 TPGSHPHPVVGMFGEMVFARVFGNSENLYANPNSHQLMRSNGSRMRRQEMQADKFLNRIS 231
TP ++ +FGN E+L+ M A+K LN+IS
Sbjct: 158 TP-------------VIPRYMFGNYEDLHL-------------------MVANKSLNKIS 185
>Medtr8g465910.1 | E3 ubiquitin-protein ligase RMA1H1-like protein |
HC | chr8:23517772-23514789 | 20130731
Length = 244
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/229 (40%), Positives = 126/229 (55%), Gaps = 28/229 (12%)
Query: 9 QELKTTPNSVTETE-SSNGCFDCNICLDIAHEPVVTLCGHLYCWPCIYKWLHVQSDSLAP 67
+ KT+ + + +++ +++ FDCNICLD +PVVT CGHLYCWPCIYKWL +QS +
Sbjct: 24 KNWKTSTDVIADSDRNASSGFDCNICLDCVQDPVVTFCGHLYCWPCIYKWLDIQSGISSE 83
Query: 68 DE--HPQCPVCKVDISHSTMVPLYGRGH--APRGGKASCCDLFTPPRPPASGAQALLGTX 123
+E PQCPVCK ++S S++VPLYGRG GKA + P RP +G ++ T
Sbjct: 84 NEKQKPQCPVCKSELSQSSLVPLYGRGQTMTLSEGKAQQVGIVVPRRP--TGPRSFNPT- 140
Query: 124 XXXXXXXXXXXXXYRNPYQGQYFSSPLYQEEDDDATSQMFNLGASTMTTPGSHPHPVVGM 183
Y++P Q + S MF +T GS G+
Sbjct: 141 ----TVSQPTYQNYQHPRQ--------FNSIPSSYPSPMF-------STSGSALDNTYGI 181
Query: 184 FGEMVFARVFGNS-ENLYANPNSHQLMRSNGSRMRRQEMQADKFLNRIS 231
FGEM++ R+FGN EN+Y PNS+ +N RMRR MQ DK LNRIS
Sbjct: 182 FGEMIYGRMFGNQIENMYTYPNSYSFQGTNNPRMRRHLMQVDKSLNRIS 230
>Medtr2g090295.1 | E3 ubiquitin-protein ligase RMA1H1-like protein |
HC | chr2:38396296-38393419 | 20130731
Length = 247
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/249 (38%), Positives = 120/249 (48%), Gaps = 36/249 (14%)
Query: 1 MAFQHYFSQELKTTPN------------SVTETESSNGCFDCNICLDIAHEPVVTLCGHL 48
MAF YF + + + + E S + FDCNICL+ +PVVTLCGHL
Sbjct: 1 MAFNQYFEEGMNQIDSLEEKSSQEMWKCASAEAISGSSGFDCNICLECVQDPVVTLCGHL 60
Query: 49 YCWPCIYKWLHVQSDSLAP-DEHPQCPVCKVDISHSTMVPLYGRGHA--PRGGKASCCDL 105
YCWPCIYKWL+ +++ E PQCPVCK +IS S++VPLYGRG P G
Sbjct: 61 YCWPCIYKWLNFHAENQEKQKEEPQCPVCKSEISKSSLVPLYGRGQTTPPSKGNDHQIGS 120
Query: 106 FTPPRPPASGAQALLGTXXXXXXXXXXXXXXYRNPYQGQYFSSPLYQEEDDDATSQMFNL 165
PPRP L Y P Y S M N
Sbjct: 121 VIPPRPLGPSWMTNLPRSLDAANVSQHNSRTYH----------PHYLNHSQRYASPMLNT 170
Query: 166 GASTMTTPGSHPHPV---VGMFGEMVFARVFGNS-ENLYANPNSHQLMRSNGSRMRRQEM 221
G GS P+P+ G+FGEM++AR+FGN N+Y PNS+ L + R+RR M
Sbjct: 171 G-------GSLPNPLDTSYGVFGEMIYARIFGNQVTNIYTYPNSYNLTGISNPRIRRHLM 223
Query: 222 QADKFLNRI 230
+ADK L RI
Sbjct: 224 RADKSLGRI 232
>Medtr2g090325.1 | zinc finger, C3HC4 type (RING finger) protein |
LC | chr2:38420153-38419551 | 20130731
Length = 200
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/94 (55%), Positives = 62/94 (65%), Gaps = 12/94 (12%)
Query: 28 FDCNICLDIAHEPVVTLCGHLYCWPCIYKWLHVQSDSLAPDEHPQCPVCKVDISHSTMVP 87
FDCNICL+ +PVVTLCGHLYCWPCIYKWL+ + +E QCPVCK++IS ST+VP
Sbjct: 18 FDCNICLENVQDPVVTLCGHLYCWPCIYKWLNTR------NEKSQCPVCKLEISESTLVP 71
Query: 88 LYGRGHAPRGGKASCCDLFTPPRPPASGAQALLG 121
LYGRG K + PPRP G + LG
Sbjct: 72 LYGRGKTTSTSKG----IVVPPRP--LGPSSWLG 99
>Medtr7g093390.2 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr7:37118841-37122307 | 20130731
Length = 453
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 64/95 (67%), Gaps = 7/95 (7%)
Query: 28 FDCNICLDIAHEPVVTLCGHLYCWPCIYKWLHVQSDSLAPDEHPQCPVCKVDISHSTMVP 87
FDCNICLD+A EPV+T CGHL+CW C+Y+WLH+ SD+ +CPVCK +++ ++ P
Sbjct: 170 FDCNICLDLAKEPVLTCCGHLFCWQCLYRWLHLHSDAR------ECPVCKGEVTIKSVTP 223
Query: 88 LYGRGHAPRGGKASCCDLFTPPRPPASGAQALLGT 122
+YGRG++ R + L PPRP A ++L T
Sbjct: 224 IYGRGNSTRVLEEDST-LKIPPRPQAKRVESLRQT 257
>Medtr7g093390.3 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr7:37118841-37121989 | 20130731
Length = 453
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 64/95 (67%), Gaps = 7/95 (7%)
Query: 28 FDCNICLDIAHEPVVTLCGHLYCWPCIYKWLHVQSDSLAPDEHPQCPVCKVDISHSTMVP 87
FDCNICLD+A EPV+T CGHL+CW C+Y+WLH+ SD+ +CPVCK +++ ++ P
Sbjct: 170 FDCNICLDLAKEPVLTCCGHLFCWQCLYRWLHLHSDAR------ECPVCKGEVTIKSVTP 223
Query: 88 LYGRGHAPRGGKASCCDLFTPPRPPASGAQALLGT 122
+YGRG++ R + L PPRP A ++L T
Sbjct: 224 IYGRGNSTRVLEEDST-LKIPPRPQAKRVESLRQT 257
>Medtr7g093390.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr7:37118817-37121936 | 20130731
Length = 453
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 64/95 (67%), Gaps = 7/95 (7%)
Query: 28 FDCNICLDIAHEPVVTLCGHLYCWPCIYKWLHVQSDSLAPDEHPQCPVCKVDISHSTMVP 87
FDCNICLD+A EPV+T CGHL+CW C+Y+WLH+ SD+ +CPVCK +++ ++ P
Sbjct: 170 FDCNICLDLAKEPVLTCCGHLFCWQCLYRWLHLHSDAR------ECPVCKGEVTIKSVTP 223
Query: 88 LYGRGHAPRGGKASCCDLFTPPRPPASGAQALLGT 122
+YGRG++ R + L PPRP A ++L T
Sbjct: 224 IYGRGNSTRVLEEDST-LKIPPRPQAKRVESLRQT 257
>Medtr7g093390.4 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr7:37118817-37122307 | 20130731
Length = 453
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 64/95 (67%), Gaps = 7/95 (7%)
Query: 28 FDCNICLDIAHEPVVTLCGHLYCWPCIYKWLHVQSDSLAPDEHPQCPVCKVDISHSTMVP 87
FDCNICLD+A EPV+T CGHL+CW C+Y+WLH+ SD+ +CPVCK +++ ++ P
Sbjct: 170 FDCNICLDLAKEPVLTCCGHLFCWQCLYRWLHLHSDAR------ECPVCKGEVTIKSVTP 223
Query: 88 LYGRGHAPRGGKASCCDLFTPPRPPASGAQALLGT 122
+YGRG++ R + L PPRP A ++L T
Sbjct: 224 IYGRGNSTRVLEEDST-LKIPPRPQAKRVESLRQT 257
>Medtr2g090330.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr2:38425346-38424779 | 20130731
Length = 163
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 49/86 (56%), Positives = 60/86 (69%), Gaps = 4/86 (4%)
Query: 28 FDCNICLDIAHEPVVTLCGHLYCWPCIYKWLHVQSDSLAPDEHPQCPVCKVDISHSTMVP 87
F+CNICL+ +PVVTLCGHLYCWPCIYKW + S S +E P+CP+CK +IS ST+VP
Sbjct: 30 FECNICLEHVKDPVVTLCGHLYCWPCIYKW--INSTSWEHNEKPECPICKSEISESTLVP 87
Query: 88 LYGRGHAPRG--GKASCCDLFTPPRP 111
LYGRG G+A + PPRP
Sbjct: 88 LYGRGKTTSSSEGEAHQDGVVVPPRP 113
>Medtr2g090330.2 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr2:38426674-38424779 | 20130731
Length = 163
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 49/86 (56%), Positives = 60/86 (69%), Gaps = 4/86 (4%)
Query: 28 FDCNICLDIAHEPVVTLCGHLYCWPCIYKWLHVQSDSLAPDEHPQCPVCKVDISHSTMVP 87
F+CNICL+ +PVVTLCGHLYCWPCIYKW + S S +E P+CP+CK +IS ST+VP
Sbjct: 30 FECNICLEHVKDPVVTLCGHLYCWPCIYKW--INSTSWEHNEKPECPICKSEISESTLVP 87
Query: 88 LYGRGHAPRG--GKASCCDLFTPPRP 111
LYGRG G+A + PPRP
Sbjct: 88 LYGRGKTTSSSEGEAHQDGVVVPPRP 113
>Medtr2g090330.3 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr2:38426674-38424779 | 20130731
Length = 166
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 49/86 (56%), Positives = 60/86 (69%), Gaps = 4/86 (4%)
Query: 28 FDCNICLDIAHEPVVTLCGHLYCWPCIYKWLHVQSDSLAPDEHPQCPVCKVDISHSTMVP 87
F+CNICL+ +PVVTLCGHLYCWPCIYKW + S S +E P+CP+CK +IS ST+VP
Sbjct: 33 FECNICLEHVKDPVVTLCGHLYCWPCIYKW--INSTSWEHNEKPECPICKSEISESTLVP 90
Query: 88 LYGRGHAPRG--GKASCCDLFTPPRP 111
LYGRG G+A + PPRP
Sbjct: 91 LYGRGKTTSSSEGEAHQDGVVVPPRP 116
>Medtr1g021895.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr1:6660200-6658417 | 20130731
Length = 232
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 48/67 (71%), Gaps = 6/67 (8%)
Query: 26 GCFDCNICLDIAHEPVVTLCGHLYCWPCIYKWLHVQSDSLAPDEHPQCPVCKVDISHSTM 85
G F+CNIC D+A +P++TLCGHL+CWPC+YKWLH S S +CPVCK I +
Sbjct: 28 GNFECNICFDLAQDPIITLCGHLFCWPCLYKWLHFHSQSR------ECPVCKAMIEEEKL 81
Query: 86 VPLYGRG 92
VPLYGRG
Sbjct: 82 VPLYGRG 88
>Medtr1g021895.2 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr1:6660432-6658324 | 20130731
Length = 232
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 48/67 (71%), Gaps = 6/67 (8%)
Query: 26 GCFDCNICLDIAHEPVVTLCGHLYCWPCIYKWLHVQSDSLAPDEHPQCPVCKVDISHSTM 85
G F+CNIC D+A +P++TLCGHL+CWPC+YKWLH S S +CPVCK I +
Sbjct: 28 GNFECNICFDLAQDPIITLCGHLFCWPCLYKWLHFHSQSR------ECPVCKAMIEEEKL 81
Query: 86 VPLYGRG 92
VPLYGRG
Sbjct: 82 VPLYGRG 88
>Medtr1g054465.1 | zinc finger, C3HC4 type (RING finger) protein |
LC | chr1:23552590-23553177 | 20130731
Length = 195
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 67/109 (61%), Gaps = 15/109 (13%)
Query: 17 SVTETESSN--GCFDCNICLDIAHEPVVTLCGHLYCWPCIYKWLHVQS------DSLAPD 68
+V E + N G +DCNIC D+A EPV+T CGHL+CWPC+Y+WL+ +S SLA
Sbjct: 42 NVDEKDCGNDRGFYDCNICFDLAKEPVLTCCGHLFCWPCLYRWLNTKSPLSFRRSSLA-- 99
Query: 69 EHPQCPVCKVDISHSTMVPLYGRGH---APRGGKASCCDLFTPPRPPAS 114
+CPVCK +++ T+ P+YG G+ R +S L PPRP AS
Sbjct: 100 --KECPVCKGEVTDKTVTPIYGGGNEVEVVRAEDSSSTTLQIPPRPNAS 146
>Medtr4g029440.2 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr4:10176191-10172035 | 20130731
Length = 425
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 58/98 (59%), Gaps = 16/98 (16%)
Query: 22 ESSNGCFDCNICLDIAHEPVVTLCGHLYCWPCIYKWLHVQSDSLAPDEHPQCPVCKVDIS 81
ESS FDCNICLDIA +PV+T CGHL+CWPC Y+ S A + +CPVCK +++
Sbjct: 120 ESSGNFFDCNICLDIARDPVLTCCGHLFCWPCFYQL------SYAYSKAKECPVCKGEVT 173
Query: 82 HSTMVPLYGRGHAPRGGKASC------CDLFTPPRPPA 113
S ++P+YG G+ G C L PPRP A
Sbjct: 174 ESGIIPIYGHGN----GGGDCQMEMKEAGLRVPPRPKA 207
>Medtr4g029440.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr4:10176191-10172035 | 20130731
Length = 431
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 58/98 (59%), Gaps = 16/98 (16%)
Query: 22 ESSNGCFDCNICLDIAHEPVVTLCGHLYCWPCIYKWLHVQSDSLAPDEHPQCPVCKVDIS 81
ESS FDCNICLDIA +PV+T CGHL+CWPC Y+ S A + +CPVCK +++
Sbjct: 126 ESSGNFFDCNICLDIARDPVLTCCGHLFCWPCFYQL------SYAYSKAKECPVCKGEVT 179
Query: 82 HSTMVPLYGRGHAPRGGKASC------CDLFTPPRPPA 113
S ++P+YG G+ G C L PPRP A
Sbjct: 180 ESGIIPIYGHGN----GGGDCQMEMKEAGLRVPPRPKA 213
>Medtr5g019300.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr5:7292943-7291465 | 20130731
Length = 239
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 48/67 (71%), Gaps = 6/67 (8%)
Query: 26 GCFDCNICLDIAHEPVVTLCGHLYCWPCIYKWLHVQSDSLAPDEHPQCPVCKVDISHSTM 85
G F+CNIC D+A +PV+TLCGHL+CWPC+Y+WLH S S +CPVCK + +
Sbjct: 33 GDFECNICFDLAQDPVITLCGHLFCWPCLYRWLHHHSHS------QECPVCKALVQEEKL 86
Query: 86 VPLYGRG 92
VPLYGRG
Sbjct: 87 VPLYGRG 93
>Medtr1g054280.1 | zinc finger, C3HC4 type (RING finger) protein |
LC | chr1:23323943-23324740 | 20130731
Length = 265
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 56/92 (60%), Gaps = 6/92 (6%)
Query: 23 SSNGCFDCNICLDIAHEPVVTLCGHLYCWPCIYKWLHVQSDSLAPDEHPQCPVCKVDISH 82
S FDCNICLD+A PVVT CGHL+CWPC+Y+WLH++S + CPVCK +++
Sbjct: 71 SEGSVFDCNICLDLAKNPVVTCCGHLFCWPCLYRWLHLRS-----SQTKACPVCKGEVTD 125
Query: 83 STMVPLY-GRGHAPRGGKASCCDLFTPPRPPA 113
++P+Y G + + S L P RP A
Sbjct: 126 KNVIPIYGGENNVEVRHEDSSSTLQIPSRPKA 157
>Medtr1g054210.1 | zinc finger, C3HC4 type (RING finger) protein |
LC | chr1:23234618-23235307 | 20130731
Length = 229
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 58/108 (53%), Gaps = 11/108 (10%)
Query: 11 LKTTPNSVTETESSNGC------FDCNICLDIAHEPVVTLCGHLYCWPCIYKWLHVQSDS 64
L + S + NGC +DCNICL +A +PVVT CGHL+CWPC+Y+WLH S
Sbjct: 99 LDKSKTSEKKENVDNGCGSKGGFYDCNICLGLAKDPVVTRCGHLFCWPCLYRWLHSGSYG 158
Query: 65 LAPDEHPQCPVCKVDISHSTMVPLYGRGHAPRGGKASCCDLFTPPRPP 112
+ +CPVCK ++ ++P+YG G+ G PR P
Sbjct: 159 -----NKECPVCKGEVKDKKVIPIYGGGNDVEVGHEDSSSTLQIPRRP 201
>Medtr1g054260.1 | zinc finger, C3HC4 type (RING finger) protein |
LC | chr1:23305014-23305622 | 20130731
Length = 202
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 60/97 (61%), Gaps = 13/97 (13%)
Query: 26 GCFDCNICLDIAHEPVVTLCGHLYCWPCIYKWLHVQS------DSLAPDEHPQCPVCKVD 79
G +DCNIC +A +PV+T CGHL+CWPC+Y+WL+ +S SLA +CPVCK +
Sbjct: 85 GFYDCNICFVLAKDPVLTCCGHLFCWPCLYRWLNTKSPLSFTRSSLA----KECPVCKGE 140
Query: 80 ISHSTMVPLYGRGH---APRGGKASCCDLFTPPRPPA 113
++ T+ P+YG G+ R +S L PPRP A
Sbjct: 141 VTDKTVTPIYGGGNDVEVVRAEDSSSTTLQIPPRPNA 177
>Medtr2g061230.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr2:25954060-25951976 | 20130731
Length = 237
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 12/90 (13%)
Query: 28 FDCNICLDIAHEPVVTLCGHLYCWPCIYKWLHVQSDSLAPDEHPQCPVCKVDISHSTMVP 87
FDCNICLD A+ PV+T CGHL+CW C Y+ + S++ +CPVC+ ++ + ++P
Sbjct: 107 FDCNICLDTANNPVLTCCGHLFCWECFYQLAYAYSNA------KECPVCEGEVLDTDIIP 160
Query: 88 LYGRGHAPRGG----KASCCDLFTPPRPPA 113
+YG G K +C L P RP A
Sbjct: 161 VYGNGMIDDISRLELKETC--LRVPDRPHA 188
>Medtr1g015390.1 | peroxisome biogenesis factor 10 | HC |
chr1:3820269-3810303 | 20130731
Length = 420
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 9/74 (12%)
Query: 16 NSVTETESSNGCFDCNICLDIAHEPVVTLCGHLYCWPCIYKWLHVQSDSLAPDEHPQCPV 75
+S +E ++NG C +CL P T CGH++CW CI +W +E P+CP+
Sbjct: 352 SSSSEHNATNGVSKCTLCLSNRQHPTATSCGHVFCWNCITEWC---------NEKPECPL 402
Query: 76 CKVDISHSTMVPLY 89
C+ I+HS++V +Y
Sbjct: 403 CRTPITHSSLVCVY 416
>Medtr7g084020.1 | RING finger protein | HC | chr7:32376240-32370124
| 20130731
Length = 744
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%)
Query: 30 CNICLDIAHEPVVTLCGHLYCWPCIYKWLHVQSDSLAPDEHPQCPVCKVDISHSTMVPLY 89
C ICL+ P +T CGH++C+PCI ++L + + D +CP+C V IS + L+
Sbjct: 222 CPICLEHPLCPQITSCGHIFCFPCILQYLMLGEEDHKGDRWKRCPLCFVTISVKDLYTLH 281