Miyakogusa Predicted Gene
- Lj6g3v2017480.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v2017480.1 Non Characterized Hit- tr|I3S8Q2|I3S8Q2_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,94.33,0,ZF_SBP,Transcription factor, SBP-box; SBP,Transcription
factor, SBP-box; no description,Transcriptio,gene.g67301.t1.1
(134 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g014200.1 | squamosa promoter-binding-like protein | HC | ... 145 8e-36
Medtr4g088555.1 | squamosa promoter-binding-like protein | HC | ... 142 1e-34
Medtr1g053715.1 | squamosa promoter-binding-like protein | LC | ... 107 2e-24
Medtr8g463140.1 | squamosa promoter-binding-like protein | HC | ... 107 3e-24
Medtr3g085180.1 | squamosa promoter-binding-like protein | HC | ... 105 1e-23
Medtr7g092930.1 | squamosa promoter-binding-like protein | HC | ... 103 3e-23
Medtr2g046550.1 | squamosa promoter-binding-like protein | HC | ... 103 6e-23
Medtr7g110320.2 | squamosa promoter-binding-like protein | HC | ... 102 9e-23
Medtr7g110320.1 | squamosa promoter-binding-like protein | HC | ... 102 1e-22
Medtr7g444860.1 | squamosa promoter-binding-like protein | HC | ... 101 2e-22
Medtr2g078770.1 | squamosa promoter-binding-like protein | LC | ... 100 6e-22
Medtr5g046670.1 | squamosa promoter-binding-like protein | HC | ... 99 1e-21
Medtr1g035010.1 | squamosa promoter-binding-like protein | HC | ... 99 1e-21
Medtr8g005960.1 | squamosa promoter-binding-like protein | HC | ... 97 3e-21
Medtr1g086250.1 | squamosa promoter-binding-like protein | HC | ... 97 5e-21
Medtr4g109770.1 | LIGULELESS 1 protein, putative | HC | chr4:456... 96 8e-21
Medtr7g028740.1 | squamosa promoter-binding-like protein | HC | ... 94 3e-20
Medtr7g028740.2 | squamosa promoter-binding-like protein | HC | ... 94 3e-20
Medtr2g461920.1 | LIGULELESS 1 protein, putative | HC | chr2:256... 92 1e-19
Medtr8g080680.1 | squamosa promoter-binding-like protein | HC | ... 90 7e-19
Medtr3g099080.1 | squamosa promoter-binding 13A-like protein | H... 89 1e-18
Medtr8g080670.1 | squamosa promoter-binding-like protein | LC | ... 89 1e-18
Medtr8g080690.1 | squamosa promoter-binding-like protein | LC | ... 89 2e-18
Medtr8g096780.1 | squamosa promoter-binding 13A-like protein | H... 87 4e-18
Medtr2g020620.1 | squamosa promoter-binding-like protein | HC | ... 68 3e-12
Medtr1g086250.2 | squamosa promoter-binding-like protein | HC | ... 54 4e-08
Medtr2g020620.2 | squamosa promoter-binding-like protein | HC | ... 50 7e-07
Medtr8g066240.1 | squamosa promoter-binding 13A-like protein | H... 47 7e-06
>Medtr2g014200.1 | squamosa promoter-binding-like protein | HC |
chr2:3964615-3967481 | 20130731
Length = 143
Score = 145 bits (367), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 77/111 (69%), Positives = 90/111 (81%), Gaps = 9/111 (8%)
Query: 24 YGEDGIRKKRVVVTDLYSKRGSKAGGSAVPPSCQVEGCYADLSGAKAYHRRHKVCEHHAK 83
YG+D ++KRVV LY+K+GSKAGGS V PSCQV+ C ADLS AK YH+RHKVCE+H+K
Sbjct: 34 YGDDE-KRKRVVTDHLYNKKGSKAGGS-VTPSCQVDNCNADLSAAKQYHKRHKVCENHSK 91
Query: 84 APSVLLSEQQQ-------RFHELSEFDDTKRSCRRRLAGHNERRRKNASEF 127
A SVL+SE QQ RFHE+SEFDD KRSCRRRLAGHNERRRK+ASE+
Sbjct: 92 AHSVLISELQQRFCQQCSRFHEVSEFDDLKRSCRRRLAGHNERRRKSASEY 142
>Medtr4g088555.1 | squamosa promoter-binding-like protein | HC |
chr4:35179012-35174504 | 20130731
Length = 144
Score = 142 bits (357), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/109 (70%), Positives = 86/109 (78%), Gaps = 9/109 (8%)
Query: 30 RKKRVVVTDLYSKRGSK-AGGSAVPPSCQVEGCYADLSGAKAYHRRHKVCEHHAKAPSVL 88
R+KRVV TDLYSKR SK AG S +PP CQVE C ADLS AK YHRRHKVCE+HAKAP+V
Sbjct: 37 RRKRVV-TDLYSKRSSKKAGSSNIPPCCQVENCDADLSEAKQYHRRHKVCEYHAKAPAVH 95
Query: 89 LSEQQQ-------RFHELSEFDDTKRSCRRRLAGHNERRRKNASEFQGE 130
++ QQ RFH LSEFDD KRSCRRRLAGHNERRRK+A ++QGE
Sbjct: 96 IAGLQQRFCQQCSRFHGLSEFDDAKRSCRRRLAGHNERRRKSAIDYQGE 144
>Medtr1g053715.1 | squamosa promoter-binding-like protein | LC |
chr1:22682537-22678198 | 20130731
Length = 350
Score = 107 bits (268), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/81 (65%), Positives = 61/81 (75%), Gaps = 7/81 (8%)
Query: 49 GSAVPPSCQVEGCYADLSGAKAYHRRHKVCEHHAKAPSVLLS-------EQQQRFHELSE 101
G+ PP CQVEGC DLSGAKAY+ RHKVC H+K+PSV++S +Q RFH+L E
Sbjct: 67 GNNHPPRCQVEGCKVDLSGAKAYYSRHKVCCMHSKSPSVVVSGLEQRFCQQCSRFHQLPE 126
Query: 102 FDDTKRSCRRRLAGHNERRRK 122
FD KRSCRRRLAGHNERRRK
Sbjct: 127 FDQGKRSCRRRLAGHNERRRK 147
>Medtr8g463140.1 | squamosa promoter-binding-like protein | HC |
chr8:22198280-22196925 | 20130731
Length = 180
Score = 107 bits (267), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/86 (61%), Positives = 62/86 (72%), Gaps = 7/86 (8%)
Query: 53 PPSCQVEGCYADLSGAKAYHRRHKVCEHHAKAPSVLLS-------EQQQRFHELSEFDDT 105
PP CQ E C ADL+ AK YHRRHKVCE H+KAP V+++ +Q RFH+L EFD++
Sbjct: 62 PPCCQAERCGADLTDAKRYHRRHKVCEFHSKAPVVVVAGMRQRFCQQCSRFHDLVEFDES 121
Query: 106 KRSCRRRLAGHNERRRKNASEFQGEG 131
KRSCRRRLAGHNERRRK E EG
Sbjct: 122 KRSCRRRLAGHNERRRKTNPETANEG 147
>Medtr3g085180.1 | squamosa promoter-binding-like protein | HC |
chr3:38492623-38497369 | 20130731
Length = 434
Score = 105 bits (261), Expect = 1e-23, Method: Composition-based stats.
Identities = 50/95 (52%), Positives = 66/95 (69%), Gaps = 7/95 (7%)
Query: 39 LYSKRGSKAGGSAVPPSCQVEGCYADLSGAKAYHRRHKVCEHHAKAPSVLLS-------E 91
L K+G + + + PSCQVEGC DLS AK YHR+H++C+ H+K+P V+++ +
Sbjct: 148 LCGKKGKSSSQNMLNPSCQVEGCGLDLSFAKDYHRKHRICDSHSKSPVVVVAGLERRFCQ 207
Query: 92 QQQRFHELSEFDDTKRSCRRRLAGHNERRRKNASE 126
Q RFH+LSEFDD KRSCRRRL+ HN RRRK E
Sbjct: 208 QCSRFHDLSEFDDKKRSCRRRLSDHNARRRKPQPE 242
>Medtr7g092930.1 | squamosa promoter-binding-like protein | HC |
chr7:36897295-36893347 | 20130731
Length = 337
Score = 103 bits (258), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 50/77 (64%), Positives = 58/77 (75%), Gaps = 7/77 (9%)
Query: 53 PPSCQVEGCYADLSGAKAYHRRHKVCEHHAKAPSVLLSEQQQ-------RFHELSEFDDT 105
PP CQVEGC DL+ AKAY+ RHKVC H+K+P+V +S QQ RFH+L+EFD
Sbjct: 65 PPRCQVEGCKLDLTDAKAYYSRHKVCSMHSKSPTVTVSGLQQRFCQQCSRFHQLAEFDQG 124
Query: 106 KRSCRRRLAGHNERRRK 122
KRSCRRRLAGHNERRRK
Sbjct: 125 KRSCRRRLAGHNERRRK 141
>Medtr2g046550.1 | squamosa promoter-binding-like protein | HC |
chr2:20453789-20462574 | 20130731
Length = 1025
Score = 103 bits (256), Expect = 6e-23, Method: Composition-based stats.
Identities = 54/98 (55%), Positives = 62/98 (63%), Gaps = 11/98 (11%)
Query: 36 VTDLYSKRGSKAGGSAVPPS----CQVEGCYADLSGAKAYHRRHKVCEHHAKAPSVLLS- 90
+ D K G K + VP S CQVE C ADLS AK YHRRHKVC+ H+KA L+
Sbjct: 115 IMDGEEKSGKKTKIAPVPTSNRAVCQVEDCRADLSNAKDYHRRHKVCDVHSKASKALVGS 174
Query: 91 ------EQQQRFHELSEFDDTKRSCRRRLAGHNERRRK 122
+Q RFH L EFD+ KRSCRRRLAGHN+RRRK
Sbjct: 175 VMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRK 212
>Medtr7g110320.2 | squamosa promoter-binding-like protein | HC |
chr7:45220920-45211089 | 20130731
Length = 860
Score = 102 bits (255), Expect = 9e-23, Method: Composition-based stats.
Identities = 50/83 (60%), Positives = 57/83 (68%), Gaps = 7/83 (8%)
Query: 47 AGGSAVPPSCQVEGCYADLSGAKAYHRRHKVCEHHAKAPSVLLS-------EQQQRFHEL 99
GGS+ CQVE C ADL+ AK YHRRHKVCE H+KA L+ +Q RFH L
Sbjct: 136 GGGSSSRAFCQVEDCRADLNNAKDYHRRHKVCEIHSKASKALVGNAMQRFCQQCSRFHLL 195
Query: 100 SEFDDTKRSCRRRLAGHNERRRK 122
EFD+ KRSCRRRLAGHN+RRRK
Sbjct: 196 QEFDEGKRSCRRRLAGHNKRRRK 218
>Medtr7g110320.1 | squamosa promoter-binding-like protein | HC |
chr7:45220920-45210190 | 20130731
Length = 1001
Score = 102 bits (253), Expect = 1e-22, Method: Composition-based stats.
Identities = 50/83 (60%), Positives = 57/83 (68%), Gaps = 7/83 (8%)
Query: 47 AGGSAVPPSCQVEGCYADLSGAKAYHRRHKVCEHHAKAPSVLLS-------EQQQRFHEL 99
GGS+ CQVE C ADL+ AK YHRRHKVCE H+KA L+ +Q RFH L
Sbjct: 136 GGGSSSRAFCQVEDCRADLNNAKDYHRRHKVCEIHSKASKALVGNAMQRFCQQCSRFHLL 195
Query: 100 SEFDDTKRSCRRRLAGHNERRRK 122
EFD+ KRSCRRRLAGHN+RRRK
Sbjct: 196 QEFDEGKRSCRRRLAGHNKRRRK 218
>Medtr7g444860.1 | squamosa promoter-binding-like protein | HC |
chr7:15016587-15012335 | 20130731
Length = 314
Score = 101 bits (252), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/92 (55%), Positives = 62/92 (67%), Gaps = 7/92 (7%)
Query: 45 SKAGGSAVPPSCQVEGCYADLSGAKAYHRRHKVCEHHAKAPSVLL-------SEQQQRFH 97
+ GG CQV+GC L AK YHRRHKVCE H+KAP V++ +Q RFH
Sbjct: 138 AAVGGYTAVTRCQVDGCNVALMNAKEYHRRHKVCEMHSKAPKVVVLGLEQRFCQQCSRFH 197
Query: 98 ELSEFDDTKRSCRRRLAGHNERRRKNASEFQG 129
+SEFDD+KRSCRRRLAGHNERRRK++ + G
Sbjct: 198 VVSEFDDSKRSCRRRLAGHNERRRKSSHDSVG 229
>Medtr2g078770.1 | squamosa promoter-binding-like protein | LC |
chr2:32974296-32971840 | 20130731
Length = 171
Score = 99.8 bits (247), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 64/91 (70%), Gaps = 7/91 (7%)
Query: 48 GGSAVPPSCQVEGCYADLSGAKAYHRRHKVCEHHAKAPSVLLS-------EQQQRFHELS 100
GG P CQVE C ADL+ +K YHRRHKVCE H+KA V+++ +Q RFHEL+
Sbjct: 50 GGRFSSPICQVESCGADLTFSKRYHRRHKVCEVHSKASVVVVAGMRQRFCQQCSRFHELA 109
Query: 101 EFDDTKRSCRRRLAGHNERRRKNASEFQGEG 131
EFD++KRSCRRRLA HNERRRK+ + EG
Sbjct: 110 EFDESKRSCRRRLARHNERRRKSTAGTCTEG 140
>Medtr5g046670.1 | squamosa promoter-binding-like protein | HC |
chr5:20465349-20459089 | 20130731
Length = 500
Score = 98.6 bits (244), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 7/92 (7%)
Query: 38 DLYSKRGSKAGGSAVPPSCQVEGCYADLSGAKAYHRRHKVCEHHAKAPSVLLS------- 90
++ +KR + A+ P CQV GC DLS +K YH+RHKVC+ H+K V+++
Sbjct: 226 NVLAKRSRTSSLPALAPVCQVYGCNMDLSSSKDYHKRHKVCDVHSKTAKVIVNGVEQRFC 285
Query: 91 EQQQRFHELSEFDDTKRSCRRRLAGHNERRRK 122
+Q RFH ++EFDD KRSCRRRLAGHNERRRK
Sbjct: 286 QQCSRFHLVAEFDDGKRSCRRRLAGHNERRRK 317
>Medtr1g035010.1 | squamosa promoter-binding-like protein | HC |
chr1:12692334-12698670 | 20130731
Length = 1003
Score = 98.6 bits (244), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 56/85 (65%), Gaps = 7/85 (8%)
Query: 45 SKAGGSAVPPSCQVEGCYADLSGAKAYHRRHKVCEHHAKAPSVLLSEQQQ-------RFH 97
S + SA P CQV+ C DLS AK YHRRHKVCE H+KA LL Q Q RFH
Sbjct: 93 SGSPTSASYPMCQVDNCKEDLSKAKDYHRRHKVCEAHSKASKALLGNQMQRFCQQCSRFH 152
Query: 98 ELSEFDDTKRSCRRRLAGHNERRRK 122
L EFD+ KRSCRRRLAGHN RRRK
Sbjct: 153 PLVEFDEGKRSCRRRLAGHNRRRRK 177
>Medtr8g005960.1 | squamosa promoter-binding-like protein | HC |
chr8:421415-419202 | 20130731
Length = 327
Score = 97.4 bits (241), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/98 (57%), Positives = 66/98 (67%), Gaps = 10/98 (10%)
Query: 35 VVTDLYSK-RGSKAG--GSAVPPSCQVEGCYADLSGAKAYHRRHKVCEHHAKAPSVLLS- 90
VT LY + R + G GS+ P CQ EGC ADLS AK YHRRHKVCE H+KA +V+ +
Sbjct: 163 FVTRLYRRSRPPEPGSTGSSNSPRCQAEGCNADLSQAKHYHRRHKVCEFHSKAATVVAAG 222
Query: 91 ------EQQQRFHELSEFDDTKRSCRRRLAGHNERRRK 122
+Q RFH LSEFD+ KRSCR+RLA HN RRRK
Sbjct: 223 LTQRFCQQCSRFHLLSEFDNGKRSCRKRLADHNRRRRK 260
>Medtr1g086250.1 | squamosa promoter-binding-like protein | HC |
chr1:38604282-38611936 | 20130731
Length = 1003
Score = 97.1 bits (240), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 59/92 (64%), Gaps = 7/92 (7%)
Query: 42 KRGSKAGGSAVPPSCQVEGCYADLSGAKAYHRRHKVCEHHAKAPSVLLSEQQQ------- 94
K+ AGG++ CQVE C ADLS K YHRRHKVCE H+KA L+ Q
Sbjct: 133 KKSRGAGGTSNRAVCQVEDCGADLSRGKDYHRRHKVCEMHSKASRALVGNAMQRFCQQCS 192
Query: 95 RFHELSEFDDTKRSCRRRLAGHNERRRKNASE 126
RFH L EFD+ KRSCRRRLAGHN+RRRK E
Sbjct: 193 RFHILEEFDEGKRSCRRRLAGHNKRRRKTNQE 224
>Medtr4g109770.1 | LIGULELESS 1 protein, putative | HC |
chr4:45650584-45646472 | 20130731
Length = 470
Score = 96.3 bits (238), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 47/74 (63%), Positives = 54/74 (72%), Gaps = 7/74 (9%)
Query: 56 CQVEGCYADLSGAKAYHRRHKVCEHHAKAPSVLLS-------EQQQRFHELSEFDDTKRS 108
CQV GC DLS K YH+RHKVCE H+K P V+++ +Q RFH LSEFDD KRS
Sbjct: 123 CQVYGCNKDLSSCKDYHKRHKVCEVHSKTPIVIVNGIEQRFCQQCSRFHLLSEFDDGKRS 182
Query: 109 CRRRLAGHNERRRK 122
CR+RLAGHNERRRK
Sbjct: 183 CRKRLAGHNERRRK 196
>Medtr7g028740.1 | squamosa promoter-binding-like protein | HC |
chr7:9871981-9875095 | 20130731
Length = 367
Score = 94.0 bits (232), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 54/74 (72%), Gaps = 7/74 (9%)
Query: 56 CQVEGCYADLSGAKAYHRRHKVCEHHAKAPSVLLSEQQQ-------RFHELSEFDDTKRS 108
C V+GC +DLS + YH+RH+VCE H+K P VL+ +QQ RFH L+EFDD KRS
Sbjct: 77 CSVDGCNSDLSDCREYHKRHRVCEKHSKTPVVLVGGKQQRFCQQCSRFHSLAEFDDVKRS 136
Query: 109 CRRRLAGHNERRRK 122
CR+RL GHN+RRRK
Sbjct: 137 CRKRLDGHNKRRRK 150
>Medtr7g028740.2 | squamosa promoter-binding-like protein | HC |
chr7:9871682-9875095 | 20130731
Length = 367
Score = 94.0 bits (232), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 54/74 (72%), Gaps = 7/74 (9%)
Query: 56 CQVEGCYADLSGAKAYHRRHKVCEHHAKAPSVLLSEQQQ-------RFHELSEFDDTKRS 108
C V+GC +DLS + YH+RH+VCE H+K P VL+ +QQ RFH L+EFDD KRS
Sbjct: 77 CSVDGCNSDLSDCREYHKRHRVCEKHSKTPVVLVGGKQQRFCQQCSRFHSLAEFDDVKRS 136
Query: 109 CRRRLAGHNERRRK 122
CR+RL GHN+RRRK
Sbjct: 137 CRKRLDGHNKRRRK 150
>Medtr2g461920.1 | LIGULELESS 1 protein, putative | HC |
chr2:25606881-25611792 | 20130731
Length = 539
Score = 92.4 bits (228), Expect = 1e-19, Method: Composition-based stats.
Identities = 45/74 (60%), Positives = 53/74 (71%), Gaps = 7/74 (9%)
Query: 56 CQVEGCYADLSGAKAYHRRHKVCEHHAKAPSVLLS-------EQQQRFHELSEFDDTKRS 108
CQV GC DLS K YH+RHKVCE H+K V+++ +Q RFH L+EFDD KRS
Sbjct: 171 CQVYGCNKDLSSCKDYHKRHKVCEVHSKTSKVIVNGIEQRFCQQCSRFHLLAEFDDGKRS 230
Query: 109 CRRRLAGHNERRRK 122
CR+RLAGHNERRRK
Sbjct: 231 CRKRLAGHNERRRK 244
>Medtr8g080680.1 | squamosa promoter-binding-like protein | HC |
chr8:34727462-34725302 | 20130731
Length = 398
Score = 89.7 bits (221), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 64/99 (64%), Gaps = 9/99 (9%)
Query: 33 RVVVTDLYSKRGSKAGGSAV--PPSCQVEGCYADLSGAKAYHRRHKVCEHHAKAPSVLLS 90
R +++ L ++ K+ G + PP CQVEGC +LS AK YH + +VCE HAK+P V++
Sbjct: 107 RDLMSSLILEKKCKSNGQNLQCPPHCQVEGCGLNLSSAKDYHCKRRVCESHAKSPMVVID 166
Query: 91 -------EQQQRFHELSEFDDTKRSCRRRLAGHNERRRK 122
+Q RFH+L EFD K+SCRR+L+ HN RRRK
Sbjct: 167 GLERRFCQQCSRFHDLFEFDGKKKSCRRQLSNHNARRRK 205
>Medtr3g099080.1 | squamosa promoter-binding 13A-like protein | HC |
chr3:45410078-45413482 | 20130731
Length = 376
Score = 88.6 bits (218), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 52/79 (65%), Gaps = 7/79 (8%)
Query: 55 SCQVEGCYADLSGAKAYHRRHKVCEHHAKAPSVLL-------SEQQQRFHELSEFDDTKR 107
SC V+GC +DLS + YHRRHKVCE H+K P V + +Q RFH L +FD+ KR
Sbjct: 97 SCLVDGCNSDLSNCRDYHRRHKVCELHSKTPEVTICGLKQRFCQQCSRFHSLEQFDERKR 156
Query: 108 SCRRRLAGHNERRRKNASE 126
SCR+RL GHN RRRK E
Sbjct: 157 SCRKRLDGHNRRRRKPQPE 175
>Medtr8g080670.1 | squamosa promoter-binding-like protein | LC |
chr8:34722421-34719933 | 20130731
Length = 412
Score = 88.6 bits (218), Expect = 1e-18, Method: Composition-based stats.
Identities = 48/108 (44%), Positives = 65/108 (60%), Gaps = 9/108 (8%)
Query: 28 GIRKKRVVVTDLYSKRGSKAGGSAV--PPSCQVEGCYADLSGAKAYHRRHKVCEHHAKAP 85
G R K V+ L R K+ + PP CQVEGC DLS AK Y+R+ +VC H+K+P
Sbjct: 132 GKRMKFEDVSSLVFGRKCKSNDQNLQCPPLCQVEGCGLDLSSAKHYYRKRRVCVDHSKSP 191
Query: 86 SVLLS-------EQQQRFHELSEFDDTKRSCRRRLAGHNERRRKNASE 126
V++ +Q RFH+L EFD K+SCRRRL+ HN RRR ++ +
Sbjct: 192 MVVIDGLERRFCQQCSRFHDLFEFDGKKKSCRRRLSQHNARRRNHSRK 239
>Medtr8g080690.1 | squamosa promoter-binding-like protein | LC |
chr8:34731697-34729479 | 20130731
Length = 376
Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 55/80 (68%), Gaps = 7/80 (8%)
Query: 54 PSCQVEGCYADLSGAKAYHRRHKVCEHHAKAPSVLLS-------EQQQRFHELSEFDDTK 106
P CQVEGC DLS AK YHR+ +VCE H+K+P V++ +Q RFH L+EFD+ K
Sbjct: 149 PRCQVEGCGLDLSSAKDYHRKRRVCESHSKSPMVVIDGMVRRFCQQCGRFHNLAEFDEKK 208
Query: 107 RSCRRRLAGHNERRRKNASE 126
RSCR +L+ HN RRRK+ E
Sbjct: 209 RSCREQLSRHNARRRKHQPE 228
>Medtr8g096780.1 | squamosa promoter-binding 13A-like protein | HC |
chr8:40622636-40626632 | 20130731
Length = 390
Score = 87.0 bits (214), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 51/79 (64%), Gaps = 7/79 (8%)
Query: 55 SCQVEGCYADLSGAKAYHRRHKVCEHHAKAPSVLLSEQQQ-------RFHELSEFDDTKR 107
SC V+GC ADLS + YHRRHKVCE H+K V + +Q RFH L EFD+ KR
Sbjct: 98 SCLVDGCQADLSNCRDYHRRHKVCELHSKTAQVTIGGHKQRFCQQCSRFHALEEFDEGKR 157
Query: 108 SCRRRLAGHNERRRKNASE 126
SCR+RL GHN RRRK E
Sbjct: 158 SCRKRLDGHNRRRRKPQPE 176
>Medtr2g020620.1 | squamosa promoter-binding-like protein | HC |
chr2:6886415-6893572 | 20130731
Length = 745
Score = 67.8 bits (164), Expect = 3e-12, Method: Composition-based stats.
Identities = 33/67 (49%), Positives = 42/67 (62%), Gaps = 7/67 (10%)
Query: 65 LSGAKAYHRRHKVCEHHAKAPSVLLS-------EQQQRFHELSEFDDTKRSCRRRLAGHN 117
S K YHRRH+VC A A +V+L +Q +FH LS+FD+ KRSCRR+L HN
Sbjct: 99 FSELKGYHRRHRVCLRCANAATVVLDGDVKRYCQQCGKFHVLSDFDEGKRSCRRKLERHN 158
Query: 118 ERRRKNA 124
RRR+ A
Sbjct: 159 TRRRRKA 165
>Medtr1g086250.2 | squamosa promoter-binding-like protein | HC |
chr1:38604301-38611936 | 20130731
Length = 811
Score = 53.9 bits (128), Expect = 4e-08, Method: Composition-based stats.
Identities = 23/31 (74%), Positives = 25/31 (80%)
Query: 96 FHELSEFDDTKRSCRRRLAGHNERRRKNASE 126
FH L EFD+ KRSCRRRLAGHN+RRRK E
Sbjct: 2 FHILEEFDEGKRSCRRRLAGHNKRRRKTNQE 32
>Medtr2g020620.2 | squamosa promoter-binding-like protein | HC |
chr2:6886221-6893834 | 20130731
Length = 641
Score = 49.7 bits (117), Expect = 7e-07, Method: Composition-based stats.
Identities = 20/30 (66%), Positives = 24/30 (80%)
Query: 95 RFHELSEFDDTKRSCRRRLAGHNERRRKNA 124
RFH LS+FD+ KRSCRR+L HN RRR+ A
Sbjct: 32 RFHVLSDFDEGKRSCRRKLERHNTRRRRKA 61
>Medtr8g066240.1 | squamosa promoter-binding 13A-like protein | HC |
chr8:27511819-27512136 | 20130731
Length = 105
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 26/42 (61%)
Query: 55 SCQVEGCYADLSGAKAYHRRHKVCEHHAKAPSVLLSEQQQRF 96
S +GC ADLS + YH RHKVC+ H+K V L +QRF
Sbjct: 61 SSLADGCQADLSNYRGYHMRHKVCKLHSKTSQVTLGGHKQRF 102