Miyakogusa Predicted Gene

Lj6g3v2006630.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2006630.2 Non Characterized Hit- tr|I1M7C5|I1M7C5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.23061
PE,34.97,0.00000000000003,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; ZF_SWIM,Zinc finger, SWIM-type; SWIM,Zinc finger,
S,CUFF.60486.2
         (198 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g095940.1 | hypothetical protein | LC | chr3:43843817-4383...    49   3e-06

>Medtr3g095940.1 | hypothetical protein | LC |
           chr3:43843817-43838164 | 20130731
          Length = 149

 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 35/50 (70%), Gaps = 1/50 (2%)

Query: 10  LKTGAPMESHAVTVLTPFAFSKLQEQLVLAAHYALFSIEDG-FLVKHHTK 58
           ++T  P E HA +VLTP+AF  LQ ++ L+  YA   I++G ++V++HTK
Sbjct: 94  IRTCFPTEEHAASVLTPYAFKLLQHEIELSTKYAATEIDNGSYIVQYHTK 143