Miyakogusa Predicted Gene

Lj6g3v2006180.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2006180.1 tr|I1MEP2|I1MEP2_SOYBN D-tyrosyl-tRNA(Tyr)
deacylase OS=Glycine max PE=3 SV=1,91.25,0,DTD-like,D-Tyr tRNAtyr
deacylase-like domain; no description,D-Tyr tRNAtyr deacylase-like
domain; se,CUFF.60442.1
         (205 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g036040.1 | D-tyrosyl-tRNA(Tyr) deacylase | HC | chr2:1528...   238   2e-63

>Medtr2g036040.1 | D-tyrosyl-tRNA(Tyr) deacylase | HC |
           chr2:15282953-15279601 | 20130731
          Length = 211

 Score =  238 bits (608), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 139/215 (64%), Positives = 147/215 (68%), Gaps = 17/215 (7%)

Query: 1   MQMQSLIVCRVPFPSPCISIGVDDNNNNSKSTTV------KRRRNLNTXXXXXXXXXXXX 54
           MQ QSL      +P      G++ N N S++T V      KR     T            
Sbjct: 4   MQAQSL------WPHRFCHTGLN-NKNRSRTTIVNNTNSKKRISKAVTVRAMRAVVQRVA 56

Query: 55  XXXXXXDGRVVSEIGPGLLVLVGIHDSDGTIDADYICRKVLNMRLFPNETTGKAWDMSVM 114
                 DGR+VSEIGPGLLVLVGIHDSD   DADYICRKVLNMRLF NE TGKAWD SVM
Sbjct: 57  SASVEVDGRIVSEIGPGLLVLVGIHDSDSDADADYICRKVLNMRLFTNEDTGKAWDHSVM 116

Query: 115 QKN----YQVLLVSQFTLYGILKGNKPDFHVAMAPQRAKPFYASLVDMFRNAYNPDAIKD 170
           QK     Y     SQFTLYG LKGNKPDFHVAMAPQRAKPFYASLVD FRNAYN DA+KD
Sbjct: 117 QKKLIKFYLDKSFSQFTLYGFLKGNKPDFHVAMAPQRAKPFYASLVDRFRNAYNSDALKD 176

Query: 171 GVFGAKMKVNLVNDGPVTMQLDSNSRKNTADAAES 205
           GVFGAKMKV+LVNDGPVTMQLDS S KNT DAAES
Sbjct: 177 GVFGAKMKVSLVNDGPVTMQLDSQSPKNTIDAAES 211