Miyakogusa Predicted Gene

Lj6g3v2006030.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2006030.1 Non Characterized Hit- tr|I3SCX5|I3SCX5_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.76,0,coiled-coil,NULL; Nudix,NUDIX hydrolase domain-like;
NUDIX,NUDIX hydrolase domain; no description,NU,CUFF.60430.1
         (241 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g015380.1 | nudix hydrolase-like protein | HC | chr2:45465...   373   e-103
Medtr2g015380.2 | nudix hydrolase-like protein | HC | chr2:45465...   285   4e-77
Medtr4g087905.1 | nudix hydrolase-like protein | HC | chr4:34594...   267   5e-72

>Medtr2g015380.1 | nudix hydrolase-like protein | HC |
           chr2:4546567-4548423 | 20130731
          Length = 234

 Score =  373 bits (957), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 180/238 (75%), Positives = 207/238 (86%), Gaps = 5/238 (2%)

Query: 3   MGSNKVPERLQALLHHFRSSNSLPNITNLSRDQFNSNPTKRAAVLICLFEDSDGNLRVFL 62
           M SN   +RLQ LLHH +S    P+ TN  ++       KRAAVLICLFE  DGNLRV L
Sbjct: 1   MSSNG-SQRLQTLLHHLKS----PSNTNPLKETSIYKQNKRAAVLICLFEGQDGNLRVIL 55

Query: 63  TQRASSLSTHSGEVALPGGKREEGDADDVETALREAKEEIGLDPSLVTVITLLEPFHTKY 122
           TQRASSLSTH+GEVALPGGKR+E DADD+ETALREAKEEIGLDPSLVTV+TLLEPFHTKY
Sbjct: 56  TQRASSLSTHAGEVALPGGKRDESDADDIETALREAKEEIGLDPSLVTVVTLLEPFHTKY 115

Query: 123 GITIIPVVGMLSDKDVFSPVLNPAEVETIFDVPLEMFLKNDNRRADEREWMGEKYLRHYF 182
           GITIIPVVG+LS+KD FSP+L+ AEVE +FDVPLEMFLKNDNRR++EREW+GEK+L HYF
Sbjct: 116 GITIIPVVGILSNKDTFSPILDSAEVEAVFDVPLEMFLKNDNRRSEEREWLGEKHLVHYF 175

Query: 183 DYEVENKKYVIWAVTAAMLIRAATVILQRPPAFLEKRPKIWGGITESDRIMLQNSSSK 240
           DYEVENKKYVIWA+TAA+LIRAAT++LQRPPAFLE+RPKIWGGITE+D I+LQ S+ +
Sbjct: 176 DYEVENKKYVIWAITAAILIRAATLLLQRPPAFLEQRPKIWGGITENDMIILQRSNPQ 233


>Medtr2g015380.2 | nudix hydrolase-like protein | HC |
           chr2:4546554-4548383 | 20130731
          Length = 194

 Score =  285 bits (728), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 148/236 (62%), Positives = 169/236 (71%), Gaps = 45/236 (19%)

Query: 3   MGSNKVPERLQALLHHFRSSNSLPNITNLSRDQFNSNPTKRAAVLICLFEDSDGNLRVFL 62
           M SN   +RLQ LLHH +S    P+ TN  ++       KRAAVLICLFE  DGNLRV L
Sbjct: 1   MSSNG-SQRLQTLLHHLKS----PSNTNPLKETSIYKQNKRAAVLICLFEGQDGNLRVIL 55

Query: 63  TQRASSLSTHSGEVALPGGKREEGDADDVETALREAKEEIGLDPSLVTVITLLEPFHTKY 122
           TQRASSLSTH+GEVALPGGKR+E DADD+ETALREAKEEIGLDPSLVTV+TLLEPFHT  
Sbjct: 56  TQRASSLSTHAGEVALPGGKRDESDADDIETALREAKEEIGLDPSLVTVVTLLEPFHT-- 113

Query: 123 GITIIPVVGMLSDKDVFSPVLNPAEVETIFDVPLEMFLKNDNRRADEREWMGEKYLRHYF 182
                                                 KNDNRR++EREW+GEK+L HYF
Sbjct: 114 --------------------------------------KNDNRRSEEREWLGEKHLVHYF 135

Query: 183 DYEVENKKYVIWAVTAAMLIRAATVILQRPPAFLEKRPKIWGGITESDRIMLQNSS 238
           DYEVENKKYVIWA+TAA+LIRAAT++LQRPPAFLE+RPKIWGGITE+D I+LQ S+
Sbjct: 136 DYEVENKKYVIWAITAAILIRAATLLLQRPPAFLEQRPKIWGGITENDMIILQRSN 191


>Medtr4g087905.1 | nudix hydrolase-like protein | HC |
           chr4:34594889-34591722 | 20130731
          Length = 286

 Score =  267 bits (683), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 120/181 (66%), Positives = 153/181 (84%), Gaps = 1/181 (0%)

Query: 42  KRAAVLICLFEDSDGNLRVFLTQRASSLSTHSGEVALPGGKREEGDADDVETALREAKEE 101
           K+AAVLICLFE  DG+LRV LT+R+S LSTHSGEV+LPGGK EEGD DD +TA REA+EE
Sbjct: 92  KKAAVLICLFEGDDGDLRVILTKRSSKLSTHSGEVSLPGGKAEEGDKDDADTAKREAEEE 151

Query: 102 IGLDPSLVTVITLLEPFHTKYGITIIPVVGMLSDKDVFSPVLNPAEVETIFDVPLEMFLK 161
           IGLDP LV V+T+LEPF +K+ + ++PV+G+L DK  F PVLNPAEVE++FD PLEMFLK
Sbjct: 152 IGLDPELVNVVTVLEPFLSKHLLRVVPVIGILHDKKAFKPVLNPAEVESVFDAPLEMFLK 211

Query: 162 NDNRRADEREWMGEKYLRHYFDY-EVENKKYVIWAVTAAMLIRAATVILQRPPAFLEKRP 220
           ++NR  +EREWMGEKYL H+FDY ++E K Y+IW +TA +LIRAA+++ +RPPAF+E+ P
Sbjct: 212 DENRSQEEREWMGEKYLIHFFDYIDIEQKNYLIWGLTAGILIRAASIVYKRPPAFVEQNP 271

Query: 221 K 221
           K
Sbjct: 272 K 272