Miyakogusa Predicted Gene
- Lj6g3v1995790.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1995790.1 Non Characterized Hit- tr|G7ILI7|G7ILI7_MEDTR
Putative uncharacterized protein OS=Medicago truncatul,86.65,0,FAMILY
NOT NAMED,NULL; seg,NULL; CofD-like,NULL; no description,NULL;
UPF0052,LPPG:FO
2-phospho-L-la,NODE_39834_length_1765_cov_16.676487.path2.1
(458 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g015860.1 | maternal effect embryo arrest 18 protein | HC ... 795 0.0
Medtr2g015780.1 | transmembrane protein, putative | LC | chr2:47... 104 2e-22
Medtr2g015770.1 | hypothetical protein | HC | chr2:4708335-47081... 60 4e-09
>Medtr2g015860.1 | maternal effect embryo arrest 18 protein | HC |
chr2:4753043-4745434 | 20130731
Length = 473
Score = 795 bits (2053), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/474 (86%), Positives = 422/474 (89%), Gaps = 17/474 (3%)
Query: 1 MVDT--LLGPTFCNT-------FPR----FLTSSSMAFFPSSXXXXXXXXXXCYSNPDT- 46
MVDT LLGPTF T FP F +SS+MA P CYSNP+
Sbjct: 1 MVDTFTLLGPTFSYTPLPLTITFPTSNRIFHSSSTMASIPIPSSPNRNHRR-CYSNPNHS 59
Query: 47 --PHPQPALLVFSGGTAFNGVVEELKNFTTRVAHVLPVSDDGGSTAEIVRVLGGPAVGDI 104
PHPQPALLVFSGGTAFNGVVE+LKNFTTRVAHVLPVSDDGGSTAEIVRVLGGPAVGDI
Sbjct: 60 HPPHPQPALLVFSGGTAFNGVVEDLKNFTTRVAHVLPVSDDGGSTAEIVRVLGGPAVGDI 119
Query: 105 RSRCLRLSDQSTNEALAVRNLLGHRLPLDPLQAKSEWYSIVEGDHSLWKGVSKPYRETIR 164
RSRCLRLSDQST EALAVRNLLGHRLPLD LQAKSEWYSIVEGDH LWKGVSKPYRETIR
Sbjct: 120 RSRCLRLSDQSTAEALAVRNLLGHRLPLDSLQAKSEWYSIVEGDHVLWKGVSKPYRETIR 179
Query: 165 AFLVYFQSQILSRAEESFCFSNGSIGNFFFAGARIFFQSLDAAIFLFSRVSDIPPESLVL 224
AFLVYFQ+QIL R+E SFCFSNGSIGNFFFAGARIFFQSLDAAIFLFSRVSDIPPESLVL
Sbjct: 180 AFLVYFQNQILLRSEGSFCFSNGSIGNFFFAGARIFFQSLDAAIFLFSRVSDIPPESLVL 239
Query: 225 PVISTNDRLTLGCELLDGTIIRGQNEISHPTSGSMELIKKESLSAPALPSKIKRVFYMSS 284
PVISTNDRLTLGCEL DGTIIRGQNEISHPTSG+ME IKKES SAPALPSKIKRVFYMSS
Sbjct: 240 PVISTNDRLTLGCELWDGTIIRGQNEISHPTSGTMEPIKKESFSAPALPSKIKRVFYMSS 299
Query: 285 EGKNLLHEVFPSANVAVLEQLNNVDCIVYGMGSLFTSICPSLVLLGIGEIISSRSCLKVL 344
EGKNLLHEVFPSAN AVLEQL+NVDCIVYGMGSLFTSICPSLVLLGIGEIISSRSCLKVL
Sbjct: 300 EGKNLLHEVFPSANAAVLEQLHNVDCIVYGMGSLFTSICPSLVLLGIGEIISSRSCLKVL 359
Query: 345 MLNGTCDRETNEFSASCFVTAITDALNRTYGDPCNRLQNLPSQYINTLLVPRDSEISVDV 404
MLNGT DRETN FSASCFVTAITDALNRTYG+PCNRLQNLPS+YINTLLVPR+S+IS DV
Sbjct: 360 MLNGTHDRETNGFSASCFVTAITDALNRTYGEPCNRLQNLPSEYINTLLVPRNSKISADV 419
Query: 405 GCLASQGIFDVIVVDSLSDPKVGIIYDPKSLIRTLADLIDRYMKSQVNGLIDTR 458
CLASQGIFDVIVVDSL DPKVGIIYDPKSLIR LADLI+RY+KS VN LIDTR
Sbjct: 420 DCLASQGIFDVIVVDSLLDPKVGIIYDPKSLIRALADLIERYIKSHVNSLIDTR 473
>Medtr2g015780.1 | transmembrane protein, putative | LC |
chr2:4713167-4708850 | 20130731
Length = 161
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/58 (86%), Positives = 53/58 (91%)
Query: 327 VLLGIGEIISSRSCLKVLMLNGTCDRETNEFSASCFVTAITDALNRTYGDPCNRLQNL 384
V LGIG II SRSCL+VLMLNGT DR+TN FSASCFVTAITDALNRTYG+PCNRLQNL
Sbjct: 98 VWLGIGVIIPSRSCLRVLMLNGTHDRKTNGFSASCFVTAITDALNRTYGEPCNRLQNL 155
>Medtr2g015770.1 | hypothetical protein | HC | chr2:4708335-4708177
| 20130731
Length = 52
Score = 60.5 bits (145), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/38 (76%), Positives = 32/38 (84%)
Query: 416 IVVDSLSDPKVGIIYDPKSLIRTLADLIDRYMKSQVNG 453
IVVD+L DPKV I YDPKSL+R LADLI+RY KSQV G
Sbjct: 15 IVVDTLLDPKVVIRYDPKSLVRDLADLIERYTKSQVTG 52