Miyakogusa Predicted Gene

Lj6g3v1995790.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1995790.1 Non Characterized Hit- tr|G7ILI7|G7ILI7_MEDTR
Putative uncharacterized protein OS=Medicago truncatul,86.65,0,FAMILY
NOT NAMED,NULL; seg,NULL; CofD-like,NULL; no description,NULL;
UPF0052,LPPG:FO
2-phospho-L-la,NODE_39834_length_1765_cov_16.676487.path2.1
         (458 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g015860.1 | maternal effect embryo arrest 18 protein | HC ...   795   0.0  
Medtr2g015780.1 | transmembrane protein, putative | LC | chr2:47...   104   2e-22
Medtr2g015770.1 | hypothetical protein | HC | chr2:4708335-47081...    60   4e-09

>Medtr2g015860.1 | maternal effect embryo arrest 18 protein | HC |
           chr2:4753043-4745434 | 20130731
          Length = 473

 Score =  795 bits (2053), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 408/474 (86%), Positives = 422/474 (89%), Gaps = 17/474 (3%)

Query: 1   MVDT--LLGPTFCNT-------FPR----FLTSSSMAFFPSSXXXXXXXXXXCYSNPDT- 46
           MVDT  LLGPTF  T       FP     F +SS+MA  P            CYSNP+  
Sbjct: 1   MVDTFTLLGPTFSYTPLPLTITFPTSNRIFHSSSTMASIPIPSSPNRNHRR-CYSNPNHS 59

Query: 47  --PHPQPALLVFSGGTAFNGVVEELKNFTTRVAHVLPVSDDGGSTAEIVRVLGGPAVGDI 104
             PHPQPALLVFSGGTAFNGVVE+LKNFTTRVAHVLPVSDDGGSTAEIVRVLGGPAVGDI
Sbjct: 60  HPPHPQPALLVFSGGTAFNGVVEDLKNFTTRVAHVLPVSDDGGSTAEIVRVLGGPAVGDI 119

Query: 105 RSRCLRLSDQSTNEALAVRNLLGHRLPLDPLQAKSEWYSIVEGDHSLWKGVSKPYRETIR 164
           RSRCLRLSDQST EALAVRNLLGHRLPLD LQAKSEWYSIVEGDH LWKGVSKPYRETIR
Sbjct: 120 RSRCLRLSDQSTAEALAVRNLLGHRLPLDSLQAKSEWYSIVEGDHVLWKGVSKPYRETIR 179

Query: 165 AFLVYFQSQILSRAEESFCFSNGSIGNFFFAGARIFFQSLDAAIFLFSRVSDIPPESLVL 224
           AFLVYFQ+QIL R+E SFCFSNGSIGNFFFAGARIFFQSLDAAIFLFSRVSDIPPESLVL
Sbjct: 180 AFLVYFQNQILLRSEGSFCFSNGSIGNFFFAGARIFFQSLDAAIFLFSRVSDIPPESLVL 239

Query: 225 PVISTNDRLTLGCELLDGTIIRGQNEISHPTSGSMELIKKESLSAPALPSKIKRVFYMSS 284
           PVISTNDRLTLGCEL DGTIIRGQNEISHPTSG+ME IKKES SAPALPSKIKRVFYMSS
Sbjct: 240 PVISTNDRLTLGCELWDGTIIRGQNEISHPTSGTMEPIKKESFSAPALPSKIKRVFYMSS 299

Query: 285 EGKNLLHEVFPSANVAVLEQLNNVDCIVYGMGSLFTSICPSLVLLGIGEIISSRSCLKVL 344
           EGKNLLHEVFPSAN AVLEQL+NVDCIVYGMGSLFTSICPSLVLLGIGEIISSRSCLKVL
Sbjct: 300 EGKNLLHEVFPSANAAVLEQLHNVDCIVYGMGSLFTSICPSLVLLGIGEIISSRSCLKVL 359

Query: 345 MLNGTCDRETNEFSASCFVTAITDALNRTYGDPCNRLQNLPSQYINTLLVPRDSEISVDV 404
           MLNGT DRETN FSASCFVTAITDALNRTYG+PCNRLQNLPS+YINTLLVPR+S+IS DV
Sbjct: 360 MLNGTHDRETNGFSASCFVTAITDALNRTYGEPCNRLQNLPSEYINTLLVPRNSKISADV 419

Query: 405 GCLASQGIFDVIVVDSLSDPKVGIIYDPKSLIRTLADLIDRYMKSQVNGLIDTR 458
            CLASQGIFDVIVVDSL DPKVGIIYDPKSLIR LADLI+RY+KS VN LIDTR
Sbjct: 420 DCLASQGIFDVIVVDSLLDPKVGIIYDPKSLIRALADLIERYIKSHVNSLIDTR 473


>Medtr2g015780.1 | transmembrane protein, putative | LC |
           chr2:4713167-4708850 | 20130731
          Length = 161

 Score =  104 bits (259), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 50/58 (86%), Positives = 53/58 (91%)

Query: 327 VLLGIGEIISSRSCLKVLMLNGTCDRETNEFSASCFVTAITDALNRTYGDPCNRLQNL 384
           V LGIG II SRSCL+VLMLNGT DR+TN FSASCFVTAITDALNRTYG+PCNRLQNL
Sbjct: 98  VWLGIGVIIPSRSCLRVLMLNGTHDRKTNGFSASCFVTAITDALNRTYGEPCNRLQNL 155


>Medtr2g015770.1 | hypothetical protein | HC | chr2:4708335-4708177
           | 20130731
          Length = 52

 Score = 60.5 bits (145), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 29/38 (76%), Positives = 32/38 (84%)

Query: 416 IVVDSLSDPKVGIIYDPKSLIRTLADLIDRYMKSQVNG 453
           IVVD+L DPKV I YDPKSL+R LADLI+RY KSQV G
Sbjct: 15  IVVDTLLDPKVVIRYDPKSLVRDLADLIERYTKSQVTG 52