Miyakogusa Predicted Gene

Lj6g3v1995740.2
Show Alignment: 

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1995740.2 CUFF.60410.2
         (367 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g015920.1 | papain family cysteine protease | LC | chr2:47...   504   e-143
Medtr2g015930.1 | papain family cysteine protease | LC | chr2:47...   468   e-132
Medtr4g065077.1 | papain family cysteine protease | HC | chr4:24...   315   6e-86
Medtr2g016180.1 | papain family cysteine protease | HC | chr2:48...   313   2e-85
Medtr2g016270.1 | papain family cysteine protease | HC | chr2:49...   307   1e-83
Medtr8g086470.1 | papain family cysteine protease | HC | chr8:35...   286   3e-77
Medtr3g116080.1 | papain family cysteine protease | HC | chr3:54...   263   2e-70
Medtr1g107550.1 | papain family cysteine protease | HC | chr1:48...   239   2e-63
Medtr3g112430.1 | papain family cysteine protease | HC | chr3:52...   238   9e-63
Medtr4g094918.1 | papain family cysteine protease | HC | chr4:39...   236   2e-62
Medtr2g083930.1 | papain family cysteine protease | HC | chr2:35...   234   7e-62
Medtr4g079440.1 | papain family cysteine protease | HC | chr4:30...   232   3e-61
Medtr3g075390.1 | KDEL-tailed cysteine endopeptidase CEP1 | HC |...   232   4e-61
Medtr4g080700.1 | papain family cysteine protease | HC | chr4:31...   229   2e-60
Medtr4g080730.1 | papain family cysteine protease | HC | chr4:31...   229   3e-60
Medtr1g018840.1 | papain family cysteine protease | HC | chr1:55...   221   7e-58
Medtr1g018840.2 | papain family cysteine protease | HC | chr1:55...   221   1e-57
Medtr3g102220.1 | papain family cysteine protease | HC | chr3:47...   220   2e-57
Medtr2g090890.1 | papain family cysteine protease | HC | chr2:39...   218   5e-57
Medtr4g047610.1 | papain family cysteine protease | HC | chr4:16...   218   7e-57
Medtr4g080360.1 | papain family cysteine protease | HC | chr4:31...   217   1e-56
Medtr4g079800.1 | papain family cysteine protease | HC | chr4:30...   216   2e-56
Medtr5g022560.1 | papain family cysteine protease | HC | chr5:88...   211   1e-54
Medtr4g104370.1 | KDEL-tailed cysteine endopeptidase CEP1 | HC |...   210   2e-54
Medtr4g079770.1 | papain family cysteine protease | HC | chr4:30...   209   3e-54
Medtr4g079470.1 | papain family cysteine protease | HC | chr4:30...   208   7e-54
Medtr4g107930.1 | papain family cysteine protease | HC | chr4:44...   204   9e-53
Medtr2g064475.1 | papain family cysteine protease | LC | chr2:27...   201   8e-52
Medtr7g078600.1 | papain family cysteine protease | LC | chr7:29...   201   1e-51
Medtr2g067900.1 | papain family cysteine protease | LC | chr2:28...   200   2e-51
Medtr2g067560.1 | papain family cysteine protease | HC | chr2:28...   198   8e-51
Medtr2g075830.1 | papain family cysteine protease | HC | chr2:31...   198   9e-51
Medtr4g125300.1 | papain family cysteine protease | HC | chr4:51...   194   9e-50
Medtr7g079230.1 | papain family cysteine protease | LC | chr7:30...   191   1e-48
Medtr2g015850.1 | papain family cysteine protease | HC | chr2:47...   185   7e-47
Medtr4g071060.1 | papain family cysteine protease | HC | chr4:26...   174   1e-43
Medtr1g023210.1 | papain family cysteine protease | HC | chr1:73...   170   2e-42
Medtr2g066980.1 | papain family cysteine protease | LC | chr2:28...   170   3e-42
Medtr1g023810.1 | papain family cysteine protease | LC | chr1:76...   150   3e-36
Medtr4g072340.1 | papain family cysteine protease | HC | chr4:27...   149   5e-36
Medtr1g094135.1 | papain family cysteine protease | HC | chr1:42...   146   3e-35
Medtr4g072790.1 | papain family cysteine protease | HC | chr4:27...   144   2e-34
Medtr4g073660.1 | papain family cysteine protease | HC | chr4:27...   142   5e-34
Medtr2g015840.1 | papain family cysteine protease | LC | chr2:47...   134   2e-31
Medtr7g078630.1 | cysteine proteinase superfamily protein | LC |...   131   9e-31
Medtr1g025450.1 | papain family cysteine protease | LC | chr1:81...   112   8e-25
Medtr2g016380.1 | cysteine proteinase superfamily protein | HC |...   110   2e-24
Medtr3g029560.1 | papain family cysteine protease | LC | chr3:92...    81   2e-15
Medtr7g111060.1 | cathepsin B-like cysteine protease | HC | chr7...    76   4e-14
Medtr7g111050.1 | cathepsin B-like cysteine protease | HC | chr7...    76   6e-14
Medtr7g078310.1 | papain family cysteine protease | LC | chr7:29...    71   2e-12
Medtr7g078580.1 | papain family cysteine protease | HC | chr7:29...    69   7e-12
Medtr7g079130.1 | papain family cysteine protease | HC | chr7:29...    67   3e-11
Medtr8g087510.1 | papain family cysteine protease | LC | chr8:36...    66   6e-11
Medtr2g047960.1 | papain family cysteine protease | LC | chr2:21...    63   5e-10
Medtr7g111050.2 | cathepsin B-like cysteine protease | HC | chr7...    52   9e-07
Medtr1g025370.1 | cathepsin propeptide inhibitor domain protein ...    51   1e-06
Medtr1g042480.1 | cathepsin propeptide inhibitor domain protein ...    50   4e-06
Medtr1g042360.1 | cathepsin propeptide inhibitor domain protein ...    50   4e-06

>Medtr2g015920.1 | papain family cysteine protease | LC |
           chr2:4781097-4782811 | 20130731
          Length = 374

 Score =  504 bits (1298), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 240/359 (66%), Positives = 292/359 (81%), Gaps = 8/359 (2%)

Query: 2   MISHTSNIFLLFFICTTFSCL-SSSFRIPTPYSSIMGPNLDKLPSQDEAIQLFQQWKKDH 60
           MIS+ SN+FL+F I TT  CL SS++ IPT YSSIMGPNLDKLP+QD+ I++FQ W K+H
Sbjct: 1   MISYNSNLFLIFIIFTTILCLPSSTYGIPTKYSSIMGPNLDKLPTQDKTIEIFQLWMKEH 60

Query: 61  GRVYKDLGEMAKKFEIFLSNLKYITESNAKRKSPHDFLLGLNKFADWSAKEFQETYLHEL 120
           GRVYKDL EMAKKF+IF+SNLKYITE+NAKRKS + FLLGL  F DWS++EFQE YLH +
Sbjct: 61  GRVYKDLDEMAKKFDIFISNLKYITETNAKRKSSNGFLLGLTNFTDWSSEEFQERYLHNI 120

Query: 121 DMPKEESSIMKLDDL---PCDAPSSLDWRSKGVVTHVKDQEDCGSCWAFSVVGAIEGINA 177
           DMP +  + MK++D+    C APSSLDWRSKGVV+ +KDQ++CGSCWAFS VGAIEGINA
Sbjct: 121 DMPTDIDT-MKVNDVHLSSCSAPSSLDWRSKGVVSDIKDQKNCGSCWAFSAVGAIEGINA 179

Query: 178 INTGRLTRLSEQELLDCDRVSKGCGGGWADKALDWVVRNGGIASEQDYTYTAKQVACKAS 237
           I TG+L  LSEQELLDCD +S GC  GW +KA DWV+RN G+A + DY YTA++  CKAS
Sbjct: 180 ITTGKLINLSEQELLDCDPISGGCNSGWVNKAFDWVIRNKGVALDNDYPYTAEKGVCKAS 239

Query: 238 QIPNNA--TVDGYYHVDKSENGLLCAAAQQPISVCLYAHSDDFANYNYGVYDGTNCPVVS 295
           QIPN+A  +++ Y+HV++S+ GLLCA A+QP+SVCLYA   DF +Y+ G+YDG NCPV S
Sbjct: 240 QIPNSAISSINTYHHVEQSDQGLLCAVAKQPVSVCLYA-PQDFHHYSSGIYDGPNCPVNS 298

Query: 296 VQVNHCMLIVGYDSVDGQDYWIVKNSWGSTWGMDGYMWIKRNTGKERGVCDINEWAYAP 354
              NHC+LIVGYDSVDGQDYWIVKN WG++WGM+GYM IKRNT K+ GVC IN WAY P
Sbjct: 299 KDTNHCVLIVGYDSVDGQDYWIVKNQWGTSWGMEGYMHIKRNTNKKYGVCAINSWAYNP 357


>Medtr2g015930.1 | papain family cysteine protease | LC |
           chr2:4784077-4787518 | 20130731
          Length = 361

 Score =  468 bits (1204), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 237/361 (65%), Positives = 279/361 (77%), Gaps = 13/361 (3%)

Query: 3   ISHTSNIFLLFFICTTFSCLSSS-FRIPTPYSSIMGPNLDKLPSQDEAIQLFQQWKKDHG 61
           +S TSN FLL  I T F CLSSS + IPT YSSI+GP LDKLP+Q++ I+LFQ W KDHG
Sbjct: 1   MSLTSNPFLLIIIFTIFLCLSSSTYGIPTKYSSILGPKLDKLPTQNKTIELFQIWMKDHG 60

Query: 62  RVYKDLGEMAKKFEIFLSNLKYITESNAKRKS-PHDFLLGLNKFADWSAKEFQETYLHEL 120
           RVYKDL E AKKF+IF+SNLKYITESN  RKS PH FLLGL  FADWS +EF+E  LH+L
Sbjct: 61  RVYKDLEEKAKKFDIFVSNLKYITESNGNRKSSPHGFLLGLTNFADWSPQEFKERMLHKL 120

Query: 121 DMPKEESSIMKLDDLP---CDA-PSSLDWRSKGVVTHVKDQ-EDCGSCWAFSVVGAIEGI 175
           DM     + MKL+D+    C+A PSSLDWR KG VT+VKDQ  DC SCW F+ VGAIEGI
Sbjct: 121 DMSMINDT-MKLNDIASSSCNAAPSSLDWRLKGAVTNVKDQTNDCSSCWIFTAVGAIEGI 179

Query: 176 NAINTGRLTRLSEQELLDCDRVSKGCGGGWADKALDWVVRNGGIASEQDYTYTAKQVACK 235
           NAI TG+L  LS QELLDC+  +  C  G+ + A +WV+RNGG+AS+ DY YTAK+  C+
Sbjct: 180 NAIKTGKLISLSAQELLDCNPAA--CNTGFVNNAFNWVIRNGGLASDYDYAYTAKKGFCR 237

Query: 236 ASQIPNNA--TVDGYYHVDKSENGLLCAAAQQPISVCLYAHSDDFANYNYGVYDGTNCPV 293
           ASQ+ NNA  ++D YYHV++SE GL CA A+QPISVCLYA   DF +Y+YG+YDG NCPV
Sbjct: 238 ASQVRNNAFSSIDTYYHVEQSEQGLFCAVAKQPISVCLYA-PQDFHHYSYGIYDGPNCPV 296

Query: 294 VSVQVNHCMLIVGYDSVDGQDYWIVKNSWGSTWGMDGYMWIKRNTGKERGVCDINEWAYA 353
            S   NHC+LIVGYDSVDGQDYWIVKN WG++WGM+GYM IKRNT KE GVC INEWAY 
Sbjct: 297 NSKDTNHCVLIVGYDSVDGQDYWIVKNQWGTSWGMEGYMHIKRNTNKEYGVCAINEWAYN 356

Query: 354 P 354
           P
Sbjct: 357 P 357


>Medtr4g065077.1 | papain family cysteine protease | HC |
           chr4:24449551-24451468 | 20130731
          Length = 364

 Score =  315 bits (806), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 178/367 (48%), Positives = 223/367 (60%), Gaps = 15/367 (4%)

Query: 1   MMISHTSNIFLLFFICTTFSCLSSSFRIPTPYSSIMGPNLDKLPSQDEAIQLFQQWKKDH 60
           MMIS  +   L F I  + +CLS  F + + YS      LDK  S +E  +LFQ WKK+H
Sbjct: 1   MMISKMTKFILSFLILISITCLS--FALSSEYSISSHGKLDKFSSDEEVFELFQMWKKEH 58

Query: 61  GRVYKDLGEM-AKKFEIFLSNLKYITESNAKRKSPHDFLLGLNKFADWSAKEFQETYLHE 119
           GR Y +  E  AK+FEIF +N KYI E NAKRKS     L LNKFAD S +EF +TYL +
Sbjct: 59  GRDYANSEEENAKRFEIFKTNFKYINEMNAKRKSQTQHRLSLNKFADMSPEEFSKTYLPK 118

Query: 120 LDM--PKEESSIMKLDDLPCD-APSSLDWRSKGVVTHVKDQEDCGSCWAFSVVGAIEGIN 176
           ++M  P    +    DD  C+  P+S+DWR KG VT V+DQ DC S WAFSV GAIEG+N
Sbjct: 119 IEMQVPSNRDNAKLKDDDDCENLPTSVDWREKGAVTEVRDQGDCQSHWAFSVTGAIEGLN 178

Query: 177 AINTGRLTRLSEQELLDCDRVSKGCGGGWADKALDWVVRNGGIASEQDYTYTAKQVACK- 235
            I TG L  LS QEL+DCD  SKGC GG+   A  +V+ NGGI +E +Y Y AK   CK 
Sbjct: 179 KIVTGNLINLSAQELVDCDPASKGCAGGFYFNAFGYVIENGGIDTEANYPYLAKNGTCKE 238

Query: 236 -ASQIPNNATVDGYYHVDKSENGLLCAAAQQPISVCLYAHSDDFANYNYGVYDGTNCPVV 294
            A+++    ++D    +D +E  LLC  ++QP+SV L A    F  Y  GVY G NC   
Sbjct: 239 NANKV---VSIDNLLVLDGTEEALLCRTSKQPVSVSLDATGLQF--YAGGVYGGENCKKE 293

Query: 295 SVQVNHCMLIVGYDSVDGQDYWIVKNSWGSTWGMDGYMWIKRNTGKE--RGVCDINEWAY 352
           S   N   LIVGYDSV+G+DYWIVKNSWG  WG  GY++IKRN  ++   GVC IN    
Sbjct: 294 SRNANLVGLIVGYDSVNGEDYWIVKNSWGKDWGEKGYLFIKRNVFEDWPFGVCAINAAVG 353

Query: 353 APNQISL 359
            P +  L
Sbjct: 354 YPVKTVL 360


>Medtr2g016180.1 | papain family cysteine protease | HC |
           chr2:4899750-4901997 | 20130731
          Length = 490

 Score =  313 bits (802), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 162/336 (48%), Positives = 219/336 (65%), Gaps = 5/336 (1%)

Query: 24  SSFRIPTPYSSIMGPNLDKLPSQDEAIQLFQQWKKDHGRVYKDLGEMAKKFEIFLSNLKY 83
           S + IP+ YS I+  +L+K PS+++ ++LFQQWKK+H + Y    E A + E F  NLKY
Sbjct: 23  SCYGIPSEYS-ILAFDLNKFPSEEQVVELFQQWKKEHQKFYIHPEEAALRLENFKRNLKY 81

Query: 84  ITESNAKRKSPHDFLLGLNKFADWSAKEFQETYLHELDMP-KEESSIMKLDDLPCD-APS 141
           I E NA R SP    LGLN+FAD S +EF+  ++ ++  P  + +S + +    CD AP 
Sbjct: 82  IVERNAMRNSPVGHHLGLNRFADMSNEEFKNKFISKVKKPISKRASNLHVKVESCDDAPY 141

Query: 142 SLDWRSKGVVTHVKDQEDCGSCWAFSVVGAIEGINAINTGRLTRLSEQELLDCDRVSKGC 201
           SLDWR KGVVT VKDQ +CGSCW+FS  GAIEG+NAI TG L  LSEQEL+DCD  + GC
Sbjct: 142 SLDWRKKGVVTGVKDQGNCGSCWSFSSTGAIEGVNAIVTGDLISLSEQELVDCDTTNDGC 201

Query: 202 GGGWADKALDWVVRNGGIASEQDYTYTAKQVACKASQIPNN-ATVDGYYHVDKSENGLLC 260
            GG+ D A +WV+ NGGI +E DY Y      C  ++      T+DGY  V +S++ L C
Sbjct: 202 EGGYMDYAFEWVINNGGIDTEADYPYIGVGGTCNVTKEETKVVTIDGYTDVTQSDSALFC 261

Query: 261 AAAQQPISVCLYAHSDDFANYNYGVYDGTNCPVVSVQVNHCMLIVGYDSVDGQDYWIVKN 320
           A  +QPISV +   + DF  Y  G+YDG +C      ++H +LIVGY S   QDYWIVKN
Sbjct: 262 ATVKQPISVGIDGSTLDFQLYTGGIYDG-DCSSNPDDIDHAVLIVGYGSDGNQDYWIVKN 320

Query: 321 SWGSTWGMDGYMWIKRNTGKERGVCDINEWAYAPNQ 356
           SWG++WG++G+++I+RNT  + GVC IN  A  P +
Sbjct: 321 SWGTSWGIEGFIYIRRNTNLKYGVCAINYMASFPTK 356


>Medtr2g016270.1 | papain family cysteine protease | HC |
           chr2:4947144-4949388 | 20130731
          Length = 475

 Score =  307 bits (787), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 161/334 (48%), Positives = 213/334 (63%), Gaps = 16/334 (4%)

Query: 24  SSFRIPTPYSSIMGPNLDKLPSQDEAIQLFQQWKKDHGRVYKDLGEMAKKFEIFLSNLKY 83
           S + IP+ YS I+  +L+K PS+++ ++LFQQWKK+H + Y    E A + E F  NLKY
Sbjct: 23  SCYGIPSEYS-ILAFDLNKFPSEEQVVELFQQWKKEHQKFYIHPEEAALRLENFKRNLKY 81

Query: 84  ITESNAKRKSPHDFLLGLNKFADWSAKEFQETYLHELDMPKEESSIMKLDDLPCDAPSSL 143
           I E NA R SP    LGLN+FAD S +EF+  ++         S +   DD    AP SL
Sbjct: 82  IVERNAMRNSPVGHHLGLNRFADMSNEEFKNKFI---------SKVESCDD----APYSL 128

Query: 144 DWRSKGVVTHVKDQEDCGSCWAFSVVGAIEGINAINTGRLTRLSEQELLDCDRVSKGCGG 203
           DWR KGVVT VKDQ +CGSCW+FS  GAIEG+NAI TG L  LSEQEL+DCD  + GC G
Sbjct: 129 DWRKKGVVTGVKDQGNCGSCWSFSSTGAIEGVNAIVTGDLISLSEQELVDCDTTNDGCEG 188

Query: 204 GWADKALDWVVRNGGIASEQDYTYTAKQVACKASQIPNN-ATVDGYYHVDKSENGLLCAA 262
           G+ D A +WV+ NGGI +E DY Y      C  ++      T+DGY  V +S++ L CA 
Sbjct: 189 GYMDYAFEWVINNGGIDTEADYPYIGVGGTCNVTKEETKVVTIDGYTDVTQSDSALFCAT 248

Query: 263 AQQPISVCLYAHSDDFANYNYGVYDGTNCPVVSVQVNHCMLIVGYDSVDGQDYWIVKNSW 322
            +QPISV +   + DF  Y  G+YDG +C      ++H +LIVGY S   QDYWIVKNSW
Sbjct: 249 VKQPISVGIDGSTLDFQLYTGGIYDG-DCSSNPDDIDHAVLIVGYGSDGNQDYWIVKNSW 307

Query: 323 GSTWGMDGYMWIKRNTGKERGVCDINEWAYAPNQ 356
           G++WG++G+++I+RNT  + GVC IN  A  P +
Sbjct: 308 GTSWGIEGFIYIRRNTNLKYGVCAINYMASFPTK 341


>Medtr8g086470.1 | papain family cysteine protease | HC |
           chr8:35875343-35877078 | 20130731
          Length = 364

 Score =  286 bits (731), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 167/366 (45%), Positives = 210/366 (57%), Gaps = 29/366 (7%)

Query: 1   MMISHTSNIFLLFFICTTFSCLSSSFRIPTPYSSIMGPNLDKLPSQDEAIQLFQQWKKDH 60
           MMIS  +   L F I  + +CLS  F + + YS      LDK  S +E  +LFQ WKK+H
Sbjct: 17  MMISKMTKFILSFLILISITCLS--FALSSEYSISSHGKLDKFSSDEEVFELFQMWKKEH 74

Query: 61  GRVYKDLGEMAKKFEIFLSNLKYITESNAKRKSPHDFLLGLNKFADWSAKEFQETYLHEL 120
           GR Y +  E                  NAKRKS     L LNKFAD S +EF +TYL ++
Sbjct: 75  GRDYANSEE---------------ENMNAKRKSQTQHRLSLNKFADMSPEEFSKTYLPKI 119

Query: 121 DM--PKEESSIMKLDDLPCD-APSSLDWRSKGVVTHVKDQEDCGSCWAFSVVGAIEGINA 177
           +M  P    +    DD  C+  P+S+DWR KG VT V+DQ DC S WAFSV GAIEG+N 
Sbjct: 120 EMQVPSNRDNAKLKDDDDCENLPTSVDWREKGAVTEVRDQGDCQSHWAFSVTGAIEGLNK 179

Query: 178 INTGRLTRLSEQELLDCDRVSKGCGGGWADKALDWVVRNGGIASEQDYTYTAKQVACK-- 235
           I TG L  LS QEL+DCD  SKGC GG+   A  +V+ NGGI +E +Y Y AK   CK  
Sbjct: 180 IVTGNLINLSAQELVDCDPASKGCAGGFYFNAFGYVIENGGIDTEANYPYLAKNGTCKEN 239

Query: 236 ASQIPNNATVDGYYHVDKSENGLLCAAAQQPISVCLYAHSDDFANYNYGVYDGTNCPVVS 295
           A+++    ++D    +D +E  LLC  ++QP+SV L A    F  Y  GVY G NC   S
Sbjct: 240 ANKV---VSIDNLLVLDGTEEALLCRTSKQPVSVSLDATGLQF--YAGGVYGGENCKKES 294

Query: 296 VQVNHCMLIVGYDSVDGQDYWIVKNSWGSTWGMDGYMWIKRNTGKE--RGVCDINEWAYA 353
              N   LIVGYDSV+G+DYWIVKNSWG  WG  GY++IKRN  ++   GVC IN     
Sbjct: 295 RNANLVGLIVGYDSVNGEDYWIVKNSWGKDWGEKGYLFIKRNVFEDWPFGVCAINAAVGY 354

Query: 354 PNQISL 359
           P +  L
Sbjct: 355 PVKTVL 360


>Medtr3g116080.1 | papain family cysteine protease | HC |
           chr3:54276528-54278225 | 20130731
          Length = 350

 Score =  263 bits (673), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 147/348 (42%), Positives = 211/348 (60%), Gaps = 13/348 (3%)

Query: 14  FICTTFSCLSSSFRIPTPYSSIMGPNLDKLPSQDEAIQLFQQWKKDHGRVYKDLGEMAKK 73
            + T   CL  S      +S I+G + + L S D+ I+LF+ W   HG++Y+ + E   +
Sbjct: 9   LVLTCSLCLFLSLAFGRDFS-IVGYSSEDLKSMDKLIELFESWMSRHGKIYETIEEKLLR 67

Query: 74  FEIFLSNLKYITESNAKRKSPHDFLLGLNKFADWSAKEFQETYLH-ELDMP-KEESSIMK 131
           FE+F  NLK+I + N   K   ++ LGLN+FAD S +EF+  YL  ++D+  + ESS  +
Sbjct: 68  FEVFKDNLKHIDDRN---KVVSNYWLGLNEFADLSHQEFKNKYLGLKVDLSQRRESSEEE 124

Query: 132 LDDLPCDAPSSLDWRSKGVVTHVKDQEDCGSCWAFSVVGAIEGINAINTGRLTRLSEQEL 191
                 D P S+DWR KG VT VK+Q  CGSCWAFS V A+EGIN I TG LT LSEQEL
Sbjct: 125 FTYRDVDLPKSVDWRKKGAVTPVKNQGQCGSCWAFSTVAAVEGINQIVTGNLTSLSEQEL 184

Query: 192 LDCDRV-SKGCGGGWADKALDWVVRNGGIASEQDYTYTAKQVACK-ASQIPNNATVDGYY 249
           +DCD   + GC GG  D A  ++V+NGG+  E+DY Y  ++  C+   ++    T++GY+
Sbjct: 185 IDCDTTYNNGCNGGLMDYAFSFIVKNGGLHKEEDYPYIMEESTCEMKKEVSEVVTINGYH 244

Query: 250 HVDK-SENGLLCAAAQQPISVCLYAHSDDFANYNYGVYDGTNCPVVSVQVNHCMLIVGYD 308
            V + +E  LL A A QP+SV + A   DF  Y+ GV+DG +C     +++H +  VGY 
Sbjct: 245 DVPQNNEQSLLKALANQPLSVAIEASGRDFQFYSGGVFDG-HC---GSELDHGVSAVGYG 300

Query: 309 SVDGQDYWIVKNSWGSTWGMDGYMWIKRNTGKERGVCDINEWAYAPNQ 356
           +  G DY IVKNSWG+ WG  G++ +KRN GK  G+C + + A  P +
Sbjct: 301 TSKGLDYIIVKNSWGAKWGEKGFIRMKRNIGKSEGICGLYKMASYPTK 348


>Medtr1g107550.1 | papain family cysteine protease | HC |
           chr1:48881273-48878969 | 20130731
          Length = 473

 Score =  239 bits (611), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 135/327 (41%), Positives = 191/327 (58%), Gaps = 21/327 (6%)

Query: 40  LDKLPSQDEAIQLFQQWKKDHGRVYKDLGEMAKKFEIFLSNLKYITESNAKRKSPHDFLL 99
           LD   +++  ++L++ W   HG+VY  LGE  ++FEIF  NL+YI   N      H F L
Sbjct: 37  LDAAKNENHLMKLYESWLMKHGKVYNALGEKVRRFEIFKDNLRYIENHNNFEN--HSFKL 94

Query: 100 GLNKFADWSAKEFQETYLHE--------LDMPKEESSIMKLDDLPCDAPSSLDWRSKGVV 151
           GL KFAD + +E++  +L          L   K +   ++ +D   + P  +DWR KG V
Sbjct: 95  GLTKFADLTNEEYRSMFLGTRPRKSKGLLSASKSDRYAIRDND---ELPEHVDWREKGAV 151

Query: 152 THVKDQEDCGSCWAFSVVGAIEGINAINTGRLTRLSEQELLDCDR-VSKGCGGGWADKAL 210
             VKDQ  CGSCWAFS V A+EGIN I TG L  LSEQEL+DCDR  + GC GG  D A 
Sbjct: 152 NPVKDQGQCGSCWAFSTVAAVEGINQIVTGDLISLSEQELVDCDRGYNMGCNGGLMDYAF 211

Query: 211 DWVVRNGGIASEQDYTYTAKQVACKA-SQIPNNATVDGYYHVDKS-ENGLLCAAAQQPIS 268
           +++++NGGI +E+DY Y A+   C A  +     ++DGY  V ++ E  L  A A QP+S
Sbjct: 212 EFIMKNGGIDTEEDYPYHARDNTCDAFRKNARVVSIDGYEDVPQNDEKSLKKAVAHQPVS 271

Query: 269 VCLYAHSDDFANYNYGVYDGTNCPVVSVQVNHCMLIVGYDSVDGQDYWIVKNSWGSTWGM 328
           V + A    F  Y  GV+ G    +   +++H + +VGY + +G DYW+V+NSWGS+WG 
Sbjct: 272 VAIEAGGRAFQLYQSGVFTG----ICGTELDHGVAVVGYGTENGIDYWLVRNSWGSSWGE 327

Query: 329 DGYMWIKRN-TGKERGVCDINEWAYAP 354
           +GY+ ++RN   KE G C I   A  P
Sbjct: 328 NGYIKMERNLLTKETGKCGIAMEASYP 354


>Medtr3g112430.1 | papain family cysteine protease | HC |
           chr3:52684152-52681029 | 20130731
          Length = 443

 Score =  238 bits (606), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 133/328 (40%), Positives = 187/328 (57%), Gaps = 29/328 (8%)

Query: 47  DEAIQLFQQWKKDHGRVYKDLGEMAKKFEIFLSNLKYITESNAKRKSPHDFLLGLNKFAD 106
           ++  +LFQ+W K HG+ Y    E   +F++F  N  ++++ N    S   + L LN FAD
Sbjct: 30  NDTSKLFQEWSKQHGKTYPSEEEKRYRFKVFQDNYAFVSQHNEMGNS--SYTLSLNAFAD 87

Query: 107 WSAKEFQETYL-------------HELDMPKEESSIMKLDDLPCDAPSSLDWRSKGVVTH 153
            +  EF+ T L             H  D   +++ I+++       PS +DWR    VT 
Sbjct: 88  LTHHEFKTTRLGFSPSSLLRFKFNHFEDQQFDDNGILQV-------PSEIDWRKSDAVTP 140

Query: 154 VKDQEDCGSCWAFSVVGAIEGINAINTGRLTRLSEQELLDCDRV-SKGCGGGWADKALDW 212
           VKDQ  CG+CW+FS  GAIEGIN I TG L  LSEQEL+DCDR  + GC GG  D A  +
Sbjct: 141 VKDQGSCGACWSFSATGAIEGINKIVTGSLVSLSEQELVDCDRTYNSGCDGGLMDYAYQF 200

Query: 213 VVRNGGIASEQDYTYTAKQVACKASQIPNN-ATVDGYYHVDKS-ENGLLCAAAQQPISVC 270
           ++ N GI +E+DY Y ++Q+ CK  ++     T+DGY  V  + E  LL A A QP+SV 
Sbjct: 201 IIDNKGIDTEEDYPYQSRQLLCKKDKLKRRVVTIDGYTDVPPNDEKKLLKAVAVQPVSVG 260

Query: 271 LYAHSDDFANYNYGVYDGTNCPVVSVQVNHCMLIVGYDSVDGQDYWIVKNSWGSTWGMDG 330
           +   +  F  Y+ G++ G      S  ++H +LIVGY S +G DYWIVKNSWG +WGM+G
Sbjct: 261 ICGSARAFQLYSKGIFTGP----CSTYLDHAVLIVGYGSENGVDYWIVKNSWGKSWGMNG 316

Query: 331 YMWIKRNTGKERGVCDINEWAYAPNQIS 358
           Y+ + RNT    G+C IN  A  P + S
Sbjct: 317 YIHMLRNTDNSAGLCGINMLASYPTKTS 344


>Medtr4g094918.1 | papain family cysteine protease | HC |
           chr4:39283313-39286264 | 20130731
          Length = 359

 Score =  236 bits (602), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 140/358 (39%), Positives = 196/358 (54%), Gaps = 40/358 (11%)

Query: 11  LLFFICTTFS-CLSSSFRIPTPYSSIMGPNLDKLPSQDEAIQLFQQWKKDHGRVYKDLGE 69
           LLFF   T S  + +S R                 S +E + ++++W   H +VY  LGE
Sbjct: 9   LLFFSLITLSLAMDTSMR-----------------SNEEVMTMYEEWLVKHHKVYNGLGE 51

Query: 70  MAKKFEIFLSNLKYITESNAKRKSPHDFLLGLNKFADWSAKEFQETYLHELDMPKEESSI 129
             ++FEIF  NL +I E NA+    + + +GLNKFAD + +E++  YL   +  K     
Sbjct: 52  KDQRFEIFKDNLGFIDEHNAQN---YTYKVGLNKFADMTNEEYRNMYLGTKNDAKRNVMK 108

Query: 130 MKLDDLPCDA-------PSSLDWRSKGVVTHVKDQEDCGSCWAFSVVGAIEGINAINTGR 182
           +K+      A       P  +DWRSKG V H+KDQ  CGSCWAFS +  +E IN I TG+
Sbjct: 109 IKITTGHRYAFNSGDRLPVHVDWRSKGAVAHIKDQGSCGSCWAFSTIATVEAINKIVTGK 168

Query: 183 LTRLSEQELLDCDRV-SKGCGGGWADKALDWVVRNGGIASEQDYTYTAKQVACKASQIPN 241
           L  LSEQEL+DCDR  ++GC GG  D A +++V NGGI +EQDY Y   +  C  ++   
Sbjct: 169 LVSLSEQELVDCDRAFNEGCNGGLMDYAFEFIVENGGIDTEQDYPYKGFEGRCDPTR--K 226

Query: 242 NA---TVDGYYHVDK-SENGLLCAAAQQPISVCLYAHSDDFANYNYGVYDGTNCPVVSVQ 297
           NA   ++DGY  V   +EN L  A + QP+SV + A       Y  GV+ G         
Sbjct: 227 NAKVVSIDGYEDVPAYNENALKKAVSHQPVSVAIEAGGRALQLYQSGVFTGR----CGTN 282

Query: 298 VNHCMLIVGYDSVDGQDYWIVKNSWGSTWGMDGYMWIKRNTGK-ERGVCDINEWAYAP 354
           ++H +++VGY S +G DYW+V+NSWG+ WG DGY  ++RN  K   G C I   A  P
Sbjct: 283 LDHGVVVVGYGSENGVDYWLVRNSWGTNWGEDGYFKLERNVKKINTGKCGIAMQASYP 340


>Medtr2g083930.1 | papain family cysteine protease | HC |
           chr2:35231037-35228046 | 20130731
          Length = 344

 Score =  234 bits (598), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 136/353 (38%), Positives = 194/353 (54%), Gaps = 41/353 (11%)

Query: 8   NIFLLFFICTTFSCLSSSFRIPTPYSSIMGPNLDKLPSQDEAIQLFQQWKKDHGRVYKDL 67
           NI  LFFI T ++ L  S R+                     ++  +QW ++HG+ YKD 
Sbjct: 11  NILTLFFILTLWTSLVISSRL---------------------LEKHEQWMEEHGKFYKDA 49

Query: 68  GEMAKKFEIFLSNLKYITESNAKRKSPHDFLLGLNKFADWSAKEFQETYLHELDMPK--- 124
            E  ++F+IF  NL++I   NA     + F L +N+F D +  EF+  YL+    P    
Sbjct: 50  AEKEQRFQIFKENLEFIESFNAA--GDNGFNLSINQFGDQTNDEFKANYLNGKKKPLIGV 107

Query: 125 -----EESSIMKLDDLPCDAPSSLDWRSKGVVTHVKDQEDCGSCWAFSVVGAIEGINAIN 179
                EE S+ + +++  + P+++DWR +G VT +K Q  CGSCWAF+ V AIEGI+ I 
Sbjct: 108 GIAAIEEESVFRYENVT-EVPATMDWRERGAVTPIKHQHLCGSCWAFATVAAIEGIHQIT 166

Query: 180 TGRLTRLSEQELLDCDR--VSKGCGGGWADKALDWVVRNGGIASEQDYTYTAKQVACKAS 237
           TGRL  LSEQEL+DC +   + GC GG+ + A D++V+ GGI SE +Y YT     C   
Sbjct: 167 TGRLVSLSEQELVDCVKTNTTDGCNGGYVEDACDFIVKKGGITSETNYPYTRVDGKCNVR 226

Query: 238 Q-IPNNATVDGYYHVD-KSENGLLCAAAQQPISVCLYAHSDDFANYNYGVYDGTNCPVVS 295
           +   N A + GY HV   +E  LL A A QPI+V + A    F  Y+ G+  G       
Sbjct: 227 KGTYNVAKIKGYEHVPANNEKALLKAVANQPIAVYIAATKRAFQFYSSGILKGK----CG 282

Query: 296 VQVNHCMLIVGY-DSVDGQDYWIVKNSWGSTWGMDGYMWIKRNTGKERGVCDI 347
           + ++H + IVGY  S DG  YW+VKNSWG+ WG  GY+ IKR+   + G C I
Sbjct: 283 IDLDHTVTIVGYGTSDDGVKYWLVKNSWGTKWGEKGYIKIKRDVHAKEGSCGI 335


>Medtr4g079440.1 | papain family cysteine protease | HC |
           chr4:30713897-30712622 | 20130731
          Length = 345

 Score =  232 bits (592), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 138/354 (38%), Positives = 195/354 (55%), Gaps = 22/354 (6%)

Query: 6   TSNIFLLFFICTTFSCLSSSFRIPTPYSSIMGPNLDKLPSQDEAIQ-LFQQWKKDHGRVY 64
           T+ IF+L  +C T   ++S    P        P   +  S  EA++  F  W K HGR Y
Sbjct: 7   TTTIFILLMLCNT-CVIASESECP--------PTHKQKSSDVEAMKKRFDGWVKRHGRKY 57

Query: 65  KDLGEMAKKFEIFLSNLKYITESNAKRKSPHDFLLGLNKFADWSAKEFQETYLHELDMPK 124
           K   E   +F I+ +N++YI   NA++ S   + L  NKFAD + +EFQ TY+      +
Sbjct: 58  KHNDEREVRFGIYQANVQYIQCKNAQKNS---YNLTDNKFADLTNEEFQSTYMGLSTRLR 114

Query: 125 EESSIMKLDDLPCDAPSSLDWRSKGVVTHVKDQEDCGSCWAFSVVGAIEGINAINTGRLT 184
             ++  + D+   D P S DWR +G VT + DQ  CG CWAF+ V A+EGIN I +G+L 
Sbjct: 115 SHNTGFRYDEHG-DLPESKDWRKEGAVTEIMDQGQCGGCWAFAAVAAVEGINKIKSGKLI 173

Query: 185 RLSEQELLDCDRVS--KGCGGGWADKALDWVVRNGGIASEQDYTYTAKQVACKASQIPN- 241
            LSEQEL+DCD  S  +GC GG  + A  +++ NGG+ +EQDY Y      CK  +  + 
Sbjct: 174 SLSEQELIDCDVKSGNQGCQGGLMETAYTFIIENGGLTTEQDYPYEGVDGTCKMEKAAHY 233

Query: 242 NATVDGYYHVDK-SENGLLCAAAQQPISVCLYAHSDDFANYNYGVYDGTNCPVVSVQVNH 300
            A++ GY  V   +E  L  AAA QP+SV + A    F  Y+ GV+ G    +   Q+NH
Sbjct: 234 AASISGYEEVPADNEAKLKAAAAHQPVSVAIDAGGYSFQFYSEGVFSG----ICGKQLNH 289

Query: 301 CMLIVGYDSVDGQDYWIVKNSWGSTWGMDGYMWIKRNTGKERGVCDINEWAYAP 354
            + +VGY       YWIVKNSWG+ WG  GY+ +KR+T  + G+C I   A  P
Sbjct: 290 GVTVVGYGKETINKYWIVKNSWGADWGESGYIRMKRDTLSKEGMCGIAMQASYP 343


>Medtr3g075390.1 | KDEL-tailed cysteine endopeptidase CEP1 | HC |
           chr3:34312944-34311283 | 20130731
          Length = 362

 Score =  232 bits (592), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 137/326 (42%), Positives = 195/326 (59%), Gaps = 21/326 (6%)

Query: 41  DKLPSQDEAI-QLFQQWKKDHGRVYKDLGEMAKKFEIFLSNLKYITESNAKRKSPHDFLL 99
           DK  S DE++  L+++W+  H  V ++L E  K+F +F SN+ ++  +N   K    + L
Sbjct: 27  DKDVSSDESLWDLYERWRSHH-TVSRNLNEKQKRFNVFKSNVMHVHNTNKMDKP---YKL 82

Query: 100 GLNKFADWSAKEFQETYL------HELDMPKEESSIMKLDDLPCDAPSSLDWRSKGVVTH 153
            LNKFAD +  EF+ TY       H +       S   + +    AP+S+DWR KG VT 
Sbjct: 83  KLNKFADMTNHEFKTTYAGSKVNHHRMFRGTPRVSGTFMYENFTKAPASVDWRKKGAVTD 142

Query: 154 VKDQEDCGSCWAFSVVGAIEGINAINTGRLTRLSEQELLDCD-RVSKGCGGGWADKALDW 212
           VKDQ  CGSCWAFS V A+EGIN I T RL  LSEQEL+DCD + ++GC GG  + A ++
Sbjct: 143 VKDQGQCGSCWAFSTVVAVEGINQIKTNRLVPLSEQELIDCDNQENQGCNGGLMEYAFEY 202

Query: 213 VVRNGGIASEQDYTYTAKQVACKASQ--IPNNATVDGYYHVDKS-ENGLLCAAAQQPISV 269
           + + GGI +E  Y YTA   +C A++  +P   ++DG+  V  + E+ LL A A QP+SV
Sbjct: 203 IKQKGGITTESYYPYTANDGSCDATKENVP-AVSIDGHETVPANDEDALLKAVANQPVSV 261

Query: 270 CLYAHSDDFANYNYGVYDGTNCPVVSVQVNHCMLIVGY-DSVDGQDYWIVKNSWGSTWGM 328
            + A   DF  Y+ GV+ G +C     ++NH + IVGY  +VDG +YWIV+NSWG+ WG 
Sbjct: 262 AIDAGGSDFQFYSEGVFTG-DC---GKELNHGVAIVGYGTTVDGTNYWIVRNSWGAEWGE 317

Query: 329 DGYMWIKRNTGKERGVCDINEWAYAP 354
            GY+ +KRN   + G+C I   A  P
Sbjct: 318 QGYIRMKRNVSNKEGLCGIAMEASYP 343


>Medtr4g080700.1 | papain family cysteine protease | HC |
           chr4:31186744-31185065 | 20130731
          Length = 340

 Score =  229 bits (585), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 123/298 (41%), Positives = 174/298 (58%), Gaps = 11/298 (3%)

Query: 54  QQWKKDHGRVYKDLGEMAKKFEIFLSNLKYITESNAKRKSPHDFLLGLNKFADWSAKEFQ 113
           +QW  +HG+VY+D  E  K+F IF  N+++I   NA    P+   L +N  AD +  EF+
Sbjct: 41  EQWMTEHGKVYEDAIEKEKRFMIFKDNVEFIESFNAADNQPYK--LSVNHLADLTLDEFK 98

Query: 114 ETYLHELDMPKE-ESSIMKLDDLPCDAPSSLDWRSKGVVTHVKDQEDCGSCWAFSVVGAI 172
            +      + +E  ++  K +++    P+++DWR KG VT +KDQ  CGSCWAFS V A 
Sbjct: 99  ASRNGYKKIDREFTTTSFKYENVTA-IPAAVDWRVKGAVTPIKDQGQCGSCWAFSTVAAT 157

Query: 173 EGINAINTGRLTRLSEQELLDCDRVS--KGCGGGWADKALDWVVRNGGIASEQDYTYTAK 230
           EGIN I TG+L  LSEQEL+DCD     +GC GG  +   +++++NGGI SE +Y Y A 
Sbjct: 158 EGINQITTGKLVSLSEQELVDCDTKGEDQGCEGGLMEDGFEFIIKNGGITSETNYPYKAA 217

Query: 231 QVACKASQIPNNATVDGYYHVD-KSENGLLCAAAQQPISVCLYAHSDDFANYNYGVYDGT 289
             +C  +     A + GY  V   SE  LL A A QPISV + A    F  Y+ G+Y G 
Sbjct: 218 DGSCNTATTTPVAKITGYEKVPVNSEKSLLKAVANQPISVSIDASDSSFMFYSSGIYTG- 276

Query: 290 NCPVVSVQVNHCMLIVGYDSVDGQDYWIVKNSWGSTWGMDGYMWIKRNTGKERGVCDI 347
            C     +++H +  VGY S +G DYWIVKNSWG+ WG  GY+ ++R    + G+C I
Sbjct: 277 EC---GTELDHGVTAVGYGSANGTDYWIVKNSWGTVWGEKGYIRMQRGIAAKEGLCGI 331


>Medtr4g080730.1 | papain family cysteine protease | HC |
           chr4:31195577-31193936 | 20130731
          Length = 340

 Score =  229 bits (585), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 128/319 (40%), Positives = 183/319 (57%), Gaps = 14/319 (4%)

Query: 33  SSIMGPNLDKLPSQDEAIQLFQQWKKDHGRVYKDLGEMAKKFEIFLSNLKYITESNAKRK 92
           +++M   L + PS  E     +QW  ++G++YKD  E  K+F IF  N+++I   NA   
Sbjct: 23  TNVMSRKLYESPSLQER---HEQWMSEYGKLYKDAIEKEKRFMIFKDNVEFIESFNAADN 79

Query: 93  SPHDFLLGLNKFADWSAKEFQETYLHELDMPKE-ESSIMKLDDLPCDAPSSLDWRSKGVV 151
            P  + L +N  AD +  EF+ +      + +E  ++  K +++    P ++DWR KG V
Sbjct: 80  KP--YKLSVNHLADLTLDEFKASRNGYKKIDREFATTSFKYENVTA-IPEAVDWRVKGAV 136

Query: 152 THVKDQEDCGSCWAFSVVGAIEGINAINTGRLTRLSEQELLDCDRVS--KGCGGGWADKA 209
           T +KDQ  CGSCWAFS V AIEGIN I TG+L  LSEQEL+DCD     +GC GG  +  
Sbjct: 137 TPIKDQGQCGSCWAFSTVAAIEGINQITTGKLISLSEQELVDCDTKGEDQGCEGGLMEDG 196

Query: 210 LDWVVRNGGIASEQDYTYTAKQVACKASQIPNNATVDGYYHVD-KSENGLLCAAAQQPIS 268
            +++++NGGI SE +Y Y A   +C  +     A + GY  V   SE  LL A A QPIS
Sbjct: 197 FEFIIKNGGITSETNYPYKAADGSCNTATTAPVAKITGYEKVPVNSEISLLKAVANQPIS 256

Query: 269 VCLYAHSDDFANYNYGVYDGTNCPVVSVQVNHCMLIVGYDSVDGQDYWIVKNSWGSTWGM 328
           V + A    F  Y+ G+Y G  C     +++H +  VGY S +G DYWIVKNSWG+ WG 
Sbjct: 257 VSIDASDSSFMFYSSGIYTG-EC---GTELDHGVTAVGYGSANGTDYWIVKNSWGTVWGE 312

Query: 329 DGYMWIKRNTGKERGVCDI 347
            GY+ ++R    + G+C I
Sbjct: 313 KGYIRMQRGIADKEGLCGI 331


>Medtr1g018840.1 | papain family cysteine protease | HC |
           chr1:5550841-5545981 | 20130731
          Length = 474

 Score =  221 bits (564), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 139/365 (38%), Positives = 193/365 (52%), Gaps = 31/365 (8%)

Query: 2   MISHTSNIFLLFFICTTFSCLSSSFRIPTPYSSIMGPNLDKLPSQ---DEAIQLFQQWKK 58
           M S+T +  +   I    S  + S  +     S    + DK  S+    E + ++++W  
Sbjct: 1   MDSNTLSPAMKLMIVLIISSFTVSLALDMSIISYDKTHPDKSTSKRTNKEVLTMYEEWLV 60

Query: 59  DHGRVYKDLGEMAKKFEIFLSNLKYITESNAKRKSPHDFLLGLNKFADWSAKEFQETYL- 117
            HG+ Y  LGE  K+FEIF  NLK+I E N    +   + LGL +FAD + +E++  +L 
Sbjct: 61  KHGKSYNGLGEKDKRFEIFKDNLKFIDEHNGLNST---YRLGLTRFADLTNEEYRSKFLG 117

Query: 118 ---------HELDMPKEESSIMKLDDLPCDAPSSLDWRSKGVVTHVKDQEDCGSCWAFSV 168
                     +L   K      ++ D     P S+DWR +G V  VKDQ  CGSCWAFS 
Sbjct: 118 TKIDPNRRMKKLGGSKSNRYAPRVGD---KLPESVDWRKEGAVVGVKDQASCGSCWAFSA 174

Query: 169 VGAIEGINAINTGRLTRLSEQELLDCD-RVSKGCGGGWADKALDWVVRNGGIASEQDYTY 227
           + A+EGIN I TG L  LSEQEL+DCD   ++GC GG  D A ++++ NGGI SE DY Y
Sbjct: 175 IAAVEGINKIVTGDLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIISNGGIDSEDDYPY 234

Query: 228 TAKQVACKASQIPNNA---TVDGYYHVDK-SENGLLCAAAQQPISVCLYAHSDDFANYNY 283
             K V  +  Q   NA   T+D Y  V    E  L  A A QPI+V +     +F  Y Y
Sbjct: 235 --KAVDGRCDQNRKNAKVVTIDDYEDVPAYDELALQKAVANQPIAVAVEGGGREFQLYEY 292

Query: 284 GVYDGTNCPVVSVQVNHCMLIVGYDSVDGQDYWIVKNSWGSTWGMDGYMWIKRNTGKER- 342
           GV+ G         ++H +  VGY + +G+DYWIV+NSWG +WG  GY+ ++RN    R 
Sbjct: 293 GVFTGR----CGTALDHGVAAVGYGTENGKDYWIVRNSWGGSWGEQGYIRLERNLASSRA 348

Query: 343 GVCDI 347
           G C I
Sbjct: 349 GKCGI 353


>Medtr1g018840.2 | papain family cysteine protease | HC |
           chr1:5550773-5546467 | 20130731
          Length = 457

 Score =  221 bits (563), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 139/365 (38%), Positives = 193/365 (52%), Gaps = 31/365 (8%)

Query: 2   MISHTSNIFLLFFICTTFSCLSSSFRIPTPYSSIMGPNLDKLPSQ---DEAIQLFQQWKK 58
           M S+T +  +   I    S  + S  +     S    + DK  S+    E + ++++W  
Sbjct: 1   MDSNTLSPAMKLMIVLIISSFTVSLALDMSIISYDKTHPDKSTSKRTNKEVLTMYEEWLV 60

Query: 59  DHGRVYKDLGEMAKKFEIFLSNLKYITESNAKRKSPHDFLLGLNKFADWSAKEFQETYL- 117
            HG+ Y  LGE  K+FEIF  NLK+I E N    +   + LGL +FAD + +E++  +L 
Sbjct: 61  KHGKSYNGLGEKDKRFEIFKDNLKFIDEHNGLNST---YRLGLTRFADLTNEEYRSKFLG 117

Query: 118 ---------HELDMPKEESSIMKLDDLPCDAPSSLDWRSKGVVTHVKDQEDCGSCWAFSV 168
                     +L   K      ++ D     P S+DWR +G V  VKDQ  CGSCWAFS 
Sbjct: 118 TKIDPNRRMKKLGGSKSNRYAPRVGD---KLPESVDWRKEGAVVGVKDQASCGSCWAFSA 174

Query: 169 VGAIEGINAINTGRLTRLSEQELLDCD-RVSKGCGGGWADKALDWVVRNGGIASEQDYTY 227
           + A+EGIN I TG L  LSEQEL+DCD   ++GC GG  D A ++++ NGGI SE DY Y
Sbjct: 175 IAAVEGINKIVTGDLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIISNGGIDSEDDYPY 234

Query: 228 TAKQVACKASQIPNNA---TVDGYYHVDK-SENGLLCAAAQQPISVCLYAHSDDFANYNY 283
             K V  +  Q   NA   T+D Y  V    E  L  A A QPI+V +     +F  Y Y
Sbjct: 235 --KAVDGRCDQNRKNAKVVTIDDYEDVPAYDELALQKAVANQPIAVAVEGGGREFQLYEY 292

Query: 284 GVYDGTNCPVVSVQVNHCMLIVGYDSVDGQDYWIVKNSWGSTWGMDGYMWIKRNTGKER- 342
           GV+ G         ++H +  VGY + +G+DYWIV+NSWG +WG  GY+ ++RN    R 
Sbjct: 293 GVFTGR----CGTALDHGVAAVGYGTENGKDYWIVRNSWGGSWGEQGYIRLERNLASSRA 348

Query: 343 GVCDI 347
           G C I
Sbjct: 349 GKCGI 353


>Medtr3g102220.1 | papain family cysteine protease | HC |
           chr3:47106424-47111900 | 20130731
          Length = 474

 Score =  220 bits (561), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 133/351 (37%), Positives = 196/351 (55%), Gaps = 25/351 (7%)

Query: 3   ISHTSNIFLLFFICTTFSCLSSSFRIPTPYSSIMGPNLDK--LPSQDEAIQLFQQWKKDH 60
           +   SN   +  I   F+  +++F +     S    + DK    S  E   ++++W+  H
Sbjct: 1   MGSNSNRSPMLVILIVFTLFTATFALDMSIISYDKTHSDKSSRRSDKEVKNIYEEWRVKH 60

Query: 61  GRVYKDL--GEMAKKFEIFLSNLKYITESNAKRKSPHDFLLGLNKFADWSAKEFQETYLH 118
           G++  ++   E  K+FEIF  NLK+I E NA+ ++   + +GLN+FAD S +E++  YL 
Sbjct: 61  GKLNNNIDGSEKDKRFEIFKDNLKFIDEHNAENRT---YKVGLNRFADLSNEEYRSRYLG 117

Query: 119 E------LDMPKEESSIMKLDDLPCDA-PSSLDWRSKGVVTHVKDQEDCGSCWAFSVVGA 171
                  + M + ++   +      D  P S+DWRS+G V  VKDQ  CGSCWAFS + A
Sbjct: 118 TKIDPIGMMMARTKTRSNRYAPSVGDKLPKSVDWRSQGAVVQVKDQGSCGSCWAFSTIAA 177

Query: 172 IEGINAINTGRLTRLSEQELLDCDR-VSKGCGGGWADKALDWVVRNGGIASEQDYTYTAK 230
           +EGIN I TG L  LSEQEL+DCDR V+ GC GG  + A ++++ NGGI S++DY Y  +
Sbjct: 178 VEGINKIVTGELVSLSEQELVDCDRTVNAGCDGGLMEYAFEFIINNGGIDSDEDYPY--R 235

Query: 231 QVACKASQIPNNA---TVDGYYHVDK-SENGLLCAAAQQPISVCLYAHSDDFANYNYGVY 286
            V  K  Q   NA   ++D Y  V    E  L  A A QPISV + A   +F  Y  G++
Sbjct: 236 GVDGKCDQYKKNARVVSIDDYEQVPAYDELALKKAVANQPISVAIEAGGREFQLYVSGIF 295

Query: 287 DGTNCPVVSVQVNHCMLIVGYDSVDGQDYWIVKNSWGSTWGMDGYMWIKRN 337
            G         ++H +  VGY + +G DYWIV+NSWG +WG  GY+ ++RN
Sbjct: 296 TGK----CGTALDHGVTAVGYGTENGVDYWIVRNSWGKSWGESGYVRMERN 342


>Medtr2g090890.1 | papain family cysteine protease | HC |
           chr2:39022123-39020708 | 20130731
          Length = 338

 Score =  218 bits (556), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 129/318 (40%), Positives = 184/318 (57%), Gaps = 19/318 (5%)

Query: 38  PNLDKLPSQDEAI--QLFQQWKKDHGRVYKDLGEMAKKFEIFLSNLKYITESNAKRKSPH 95
           P +    S + A+  + ++ W K +GR Y+D  E   +F+I+ SN++YI   N++  S  
Sbjct: 22  PEIHTKNSTNPAVMKKRYETWLKRYGRHYRDREEWEVRFDIYQSNVQYIEFYNSQNYS-- 79

Query: 96  DFLLGLNKFADWSAKEFQETYLHELDMPKEESSIM--KLDDLPCDAPSSLDWRSKGVVTH 153
            + L  N+FAD + +EF+ TYL  L   + ++     K  +LP     S+DWR KG VTH
Sbjct: 80  -YKLIDNRFADITNEEFKSTYLGYLPRFRVQTEFRYHKHGELP----KSIDWRKKGAVTH 134

Query: 154 VKDQEDCGSCWAFSVVGAIEGINAINTGRLTRLSEQELLDCDRVS--KGCGGGWADKALD 211
           VKDQ  CGSCWAFS V A+EGIN I T  L  LSEQ+L+DCD  S  +GC GG    A +
Sbjct: 135 VKDQGRCGSCWAFSAVAAVEGINKIKTENLVSLSEQQLIDCDIKSGNEGCEGGDMYIAFN 194

Query: 212 WVVRNGGIASEQDYTYTAKQVACKASQIPNNA-TVDGYYHVD-KSENGLLCAAAQQPISV 269
           ++ ++GGIA+ ++Y Y  +   C  S+  NNA T+ GY  V  ++E  L  A A QP+S+
Sbjct: 195 YIKKHGGIATAKEYPYKGRDGNCNKSKAKNNAVTISGYESVPARNEKMLKAAVAHQPVSI 254

Query: 270 CLYAHSDDFANYNYGVYDGTNCPVVSVQVNHCMLIVGYDSVDGQDYWIVKNSWGSTWGMD 329
              A    F  Y+ G++ G+        +NH M IVGY   +G  YWIVKNSW + WG  
Sbjct: 255 ATDAGGYAFQFYSKGIFSGS----CGKNLNHGMTIVGYGEENGDKYWIVKNSWANDWGES 310

Query: 330 GYMWIKRNTGKERGVCDI 347
           GY+ +KR+T  + G C I
Sbjct: 311 GYVRMKRDTKDKDGTCGI 328


>Medtr4g047610.1 | papain family cysteine protease | HC |
           chr4:16868445-16867071 | 20130731
          Length = 343

 Score =  218 bits (555), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 127/317 (40%), Positives = 180/317 (56%), Gaps = 14/317 (4%)

Query: 46  QDEAIQLFQQWKKDHGRVYKDLGEMAKKFEIFLSNLKYITESNAKRKSPHDFLLGLNKFA 105
           QD+  +  +QW   +G+VYKD  E  K+F+IF  N+ YI E+  K  +   + LG+N+FA
Sbjct: 31  QDDMYERHRQWMSQYGKVYKDSQEREKRFKIFTENVNYI-EAFNKGDNNKLYTLGVNQFA 89

Query: 106 DWSAKEF---QETYLHELDMPKEESSIMKLDDLPCDAPSSLDWRSKGVVTHVKDQEDCGS 162
           D +  EF   +  +   +      +S  K ++     PSS+DWR KG VT VK+Q  CG 
Sbjct: 90  DLTNDEFTSSRNKFKGHMCSSITRTSTFKYENASA-IPSSVDWRKKGAVTPVKNQGQCGC 148

Query: 163 CWAFSVVGAIEGINAINTGRLTRLSEQELLDCDR--VSKGCGGGWADKALDWVVRNGGIA 220
           CWAFS V A EGI+ ++TG+L  LSEQEL+DCD   V +GC GG  D A  ++++N G+ 
Sbjct: 149 CWAFSAVAATEGIHKLSTGKLISLSEQELVDCDTKGVDQGCEGGLMDDAFKFIIQNHGLN 208

Query: 221 SEQDYTYTAKQVACKASQIPNNA-TVDGYYHV-DKSENGLLCAAAQQPISVCLYAHSDDF 278
           +E +Y Y      C A++   NA T+ GY  V   +E  L  A A QPISV + A   DF
Sbjct: 209 TEANYPYQGVDGTCNANKGSINAVTITGYEDVPTNNEQALQKAVANQPISVAIDASGSDF 268

Query: 279 ANYNYGVYDGTNCPVVSVQVNHCMLIVGYD-SVDGQDYWIVKNSWGSTWGMDGYMWIKRN 337
             Y  GV+ G+       +++H +  VGY  S DG  YW+VKNSWG+ WG +GY+ ++R 
Sbjct: 269 QFYKSGVFTGS----CGTELDHGVTAVGYGVSNDGTKYWLVKNSWGTEWGEEGYIMMQRG 324

Query: 338 TGKERGVCDINEWAYAP 354
                G+C I   A  P
Sbjct: 325 VDAAEGLCGIAMQASYP 341


>Medtr4g080360.1 | papain family cysteine protease | HC |
           chr4:31178403-31176385 | 20130731
          Length = 342

 Score =  217 bits (553), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 137/357 (38%), Positives = 192/357 (53%), Gaps = 35/357 (9%)

Query: 2   MISHTSNIFLLFFICTTFSC-LSSSFRIPTPYSSIMGPNLDKLPSQDEAIQLFQQWKKDH 60
           M S  + I  +F I TT+      S R+  PY S                   ++W    
Sbjct: 1   MTSPNNFIIPMFLIFTTWMLPYVMSSRVLEPYLS----------------NKHEKWMTQF 44

Query: 61  GRVYKDLGEMAKKFEIFLSNLKYITESNAKRKSPHDFLLGLNKFADWSAKEFQETY---- 116
           G+ YKD  E  K+F+IF +N+++I   NA    P  F L +N FAD + +EF+ +     
Sbjct: 45  GKSYKDAAEKEKRFQIFKNNVEFIELFNAVGNKP--FNLSINHFADLTNEEFKASLNGNK 102

Query: 117 -LHE-LDMPKEESSIMKLDDLPCDAPSSLDWRSKGVVTHVKDQEDCGSCWAFSVVGAIEG 174
            LH+  D+  E +S    +      P+S+DWR +G VT +K+Q  CGSCWAFS V +IEG
Sbjct: 103 KLHDKFDILNETTSFRYHN--VTSVPASMDWRKRGAVTPIKNQGSCGSCWAFSTVASIEG 160

Query: 175 INAINTGRLTRLSEQELLDCDR-VSKGCGGGWADKALDWVVRNGGIASEQDYTYTAKQVA 233
           I+ I TG L  LSEQEL+DC R  S GC GG+ + A  ++ + GG+ASE +Y Y      
Sbjct: 161 IHQITTGELVSLSEQELIDCVRGNSSGCSGGYLEDAFKFIAKKGGMASETNYPYKETDEK 220

Query: 234 CKASQIPNN-ATVDGYYHV-DKSENGLLCAAAQQPISVCLYAHSDDFANYNYGVYDGTNC 291
           CK  +   + A + GY  V   SEN LL A A QP+SV + A    F  Y+ G++ G   
Sbjct: 221 CKFKKESKHVAEIKGYEKVPSNSENDLLKAVANQPVSVYVDAGDYVFQFYSGGIFTGK-- 278

Query: 292 PVVSVQVNHCMLIVGYD-SVDGQDYWIVKNSWGSTWGMDGYMWIKRNTGKERGVCDI 347
                  +H + IVGY  S+D  +YW+VKNSWG+ WG  GYM +KRN   ++G+C I
Sbjct: 279 --CGTDTDHVVTIVGYGVSLDYTEYWLVKNSWGTGWGEKGYMKLKRNVDSKKGLCGI 333


>Medtr4g079800.1 | papain family cysteine protease | HC |
           chr4:30891837-30893129 | 20130731
          Length = 345

 Score =  216 bits (551), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 127/319 (39%), Positives = 183/319 (57%), Gaps = 17/319 (5%)

Query: 46  QDEAI--QLFQQWKKDHGRVYKDLGEMAKKFEIFLSNLKYITESNAKRKSPHDFLLGLNK 103
           QD++I  +  +QW   +G+VYKDL E   + +IF  N+ YI  SN    +   + LG+N+
Sbjct: 32  QDDSIIYEKHEQWMVHYGKVYKDLQERENRLKIFKENVNYIEASNNAGNNKL-YKLGINQ 90

Query: 104 FADWSAKEF---QETYLHELDMPKEESSIMKLDDLPCDAPSSLDWRSKGVVTHVKDQEDC 160
           FAD + +EF   +  +   +     ++S  K ++     PS++DWR KG VT VK+Q  C
Sbjct: 91  FADITNEEFIASRNKFKGHMCSSITKTSTFKYEN--ASVPSTVDWRKKGAVTPVKNQGQC 148

Query: 161 GSCWAFSVVGAIEGINAINTGRLTRLSEQELLDCDR--VSKGCGGGWADKALDWVVRNGG 218
           G CWAFS V A EGI+ ++TG+L  LSEQEL+DCD   V +GC GG  D A  ++++N G
Sbjct: 149 GCCWAFSAVAATEGIHKLSTGKLVSLSEQELVDCDTKGVDQGCEGGLMDDAFKFIIQNHG 208

Query: 219 IASEQDYTYTAKQVACKASQIPN-NATVDGYYHVD-KSENGLLCAAAQQPISVCLYAHSD 276
           + +E  Y Y      C A++     AT+ GY  V   +EN L  A A QPISV + A   
Sbjct: 209 LHTEAQYPYQGVDGTCSANETSTPAATIAGYEDVPANNENALQKAVANQPISVAIDASGS 268

Query: 277 DFANYNYGVYDGTNCPVVSVQVNHCMLIVGYD-SVDGQDYWIVKNSWGSTWGMDGYMWIK 335
           DF  Y  GV+ G+       Q++H +  VGY  S DG  YW+VKNSWG+ WG +GY+ ++
Sbjct: 269 DFQFYKSGVFTGS----CGTQLDHGVTAVGYGISNDGTKYWLVKNSWGNDWGEEGYIRMQ 324

Query: 336 RNTGKERGVCDINEWAYAP 354
           R+    +G+C I   A  P
Sbjct: 325 RSVDAAQGLCGIAMMASYP 343


>Medtr5g022560.1 | papain family cysteine protease | HC |
           chr5:8898326-8899733 | 20130731
          Length = 344

 Score =  211 bits (536), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 121/309 (39%), Positives = 175/309 (56%), Gaps = 14/309 (4%)

Query: 54  QQWKKDHGRVYKDLGEMAKKFEIFLSNLKYITESNAKRKSPHDFLLGLNKFADWSAKEF- 112
           ++W   +G+VYKD  E  K+F+IF  N+KYI   N    +   + LG+N+FAD + +EF 
Sbjct: 40  ERWMNHYGKVYKDHQEREKRFKIFTENMKYIEAFN-NGDNNESYKLGINQFADLTNEEFV 98

Query: 113 --QETYLHELDMPKEESSIMKLDDLPCDAPSSLDWRSKGVVTHVKDQEDCGSCWAFSVVG 170
             +  +   +      ++  K +++    PS++DWR KG VT VK+Q  CG CWAFS V 
Sbjct: 99  ASRNKFKGHMCSSIIRTTTFKYENVSA-IPSTVDWRKKGAVTPVKNQGQCGCCWAFSAVA 157

Query: 171 AIEGINAINTGRLTRLSEQELLDCDR--VSKGCGGGWADKALDWVVRNGGIASEQDYTYT 228
           A EGI+ ++TG+L  LSEQEL+DCD   V +GC GG  D A  ++++N G+ +E  Y Y 
Sbjct: 158 ATEGIHKLSTGKLVSLSEQELVDCDTKGVDQGCEGGLMDDAFKFIIQNHGLNTEAQYPYQ 217

Query: 229 AKQVACKASQIPNNA-TVDGYYHVD-KSENGLLCAAAQQPISVCLYAHSDDFANYNYGVY 286
                C A++    A T+ GY  V   +E  L  A A QPISV + A   DF  Y  GV+
Sbjct: 218 GVDGTCNANKASIQATTITGYEDVPANNEQALQKAVANQPISVAIDASGSDFQFYKSGVF 277

Query: 287 DGTNCPVVSVQVNHCMLIVGYD-SVDGQDYWIVKNSWGSTWGMDGYMWIKRNTGKERGVC 345
            G+       +++H +  VGY  S DG  YW+VKNSWG+ WG +GY+ ++R      G+C
Sbjct: 278 TGS----CGTELDHGVTAVGYGVSNDGTKYWLVKNSWGTDWGEEGYIMMQRGVEAAEGLC 333

Query: 346 DINEWAYAP 354
            I   A  P
Sbjct: 334 GIAMQASYP 342


>Medtr4g104370.1 | KDEL-tailed cysteine endopeptidase CEP1 | HC |
           chr4:43181814-43180214 | 20130731
          Length = 360

 Score =  210 bits (535), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 129/322 (40%), Positives = 180/322 (55%), Gaps = 19/322 (5%)

Query: 43  LPSQDEAIQLFQQWKKDHGRVYKDLGEMAKKFEIFLSNLKYITESNAKRKSPHDFLLGLN 102
           L S+     L+++W+  H  V + L E   +F +F +N+ ++  +N   K    + L LN
Sbjct: 30  LASEKSLWDLYERWRSHH-TVTRSLDEKNNRFNVFKANVMHVHNTNKLDKP---YKLKLN 85

Query: 103 KFADWSAKEFQETYLHELDMPKEESSIMKLDDLPC------DAPSSLDWRSKGVVTHVKD 156
           KFAD +  EF+  Y             M  D+ P         PSS+DWR  G VT VKD
Sbjct: 86  KFADMTNYEFRSIYADSKVNHHRMFRGMSHDNGPFMYENVEGVPSSIDWRKIGAVTGVKD 145

Query: 157 QEDCGSCWAFSVVGAIEGINAINTGRLTRLSEQELLDCD-RVSKGCGGGWADKALDWVVR 215
           Q  CGSCWAFS + A+EGIN I T +L  LSEQEL+DCD  V++GC GG  + A +++ +
Sbjct: 146 QGQCGSCWAFSTIVAVEGINQIKTQKLVSLSEQELVDCDTEVNQGCNGGLMEYAFEFIKQ 205

Query: 216 NGGIASEQDYTYTAKQVACKASQIPNNA-TVDGYYHVD-KSENGLLCAAAQQPISVCLYA 273
           N GI +E +Y Y AK   C   +    A ++DG+ +V   +E  LL AAA QPISV + A
Sbjct: 206 N-GITTETNYPYAAKDGTCNIQKENKPAVSIDGHENVPANNEKALLKAAANQPISVAIDA 264

Query: 274 HSDDFANYNYGVYDGTNCPVVSVQVNHCMLIVGYDSV-DGQDYWIVKNSWGSTWGMDGYM 332
              DF  Y+ GV+ G +C     ++NH + IVGY +  DG  YW VKNSWGS WG  GY+
Sbjct: 265 GGSDFQFYSEGVFTG-HC---GTELNHGVAIVGYGATQDGTKYWTVKNSWGSEWGEQGYI 320

Query: 333 WIKRNTGKERGVCDINEWAYAP 354
            ++R    ++G+C I   A  P
Sbjct: 321 RMQRAISHKQGLCGIAMEASYP 342


>Medtr4g079770.1 | papain family cysteine protease | HC |
           chr4:30880789-30882078 | 20130731
          Length = 345

 Score =  209 bits (533), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 124/319 (38%), Positives = 180/319 (56%), Gaps = 17/319 (5%)

Query: 46  QDEAI--QLFQQWKKDHGRVYKDLGEMAKKFEIFLSNLKYITESNAKRKSPHDFLLGLNK 103
           QD++I  +  +QW   +G+VYKDL E   + +IF  N+ YI  SN    +   + LG+N+
Sbjct: 32  QDDSIIYEKHEQWMVHYGKVYKDLQERENRLKIFKENVNYIEASNNAGNNKL-YKLGINQ 90

Query: 104 FADWSAKEF---QETYLHELDMPKEESSIMKLDDLPCDAPSSLDWRSKGVVTHVKDQEDC 160
           FAD + +EF   +  +   +     ++S  K ++     PS++DWR KG VT VK+Q  C
Sbjct: 91  FADLTNEEFIASRNKFKGHMCSSITKTSTFKYEN--ASVPSTVDWRKKGAVTPVKNQGQC 148

Query: 161 GSCWAFSVVGAIEGINAINTGRLTRLSEQELLDCDR--VSKGCGGGWADKALDWVVRNGG 218
           G CWAFS V A EGI+ ++TG+L  LSEQEL+DCD   V +GC GG  D A  ++++N G
Sbjct: 149 GCCWAFSAVAATEGIHKLSTGKLVSLSEQELVDCDTKGVDQGCEGGLMDDAFKFIIQNHG 208

Query: 219 IASEQDYTYTAKQVACKASQIPNNA-TVDGYYHVD-KSENGLLCAAAQQPISVCLYAHSD 276
           + +E  Y Y      C A++   +A T+ GY  V   +E  L  A A QPISV + A   
Sbjct: 209 LNTEAQYPYQGVDGTCSANKASIHAVTITGYEDVPANNEQALQKAVANQPISVAIDASGS 268

Query: 277 DFANYNYGVYDGTNCPVVSVQVNHCMLIVGYD-SVDGQDYWIVKNSWGSTWGMDGYMWIK 335
           DF  Y  GV+ G+       +++H +  VGY    DG  YW+VKNSWG+ WG +GY+ ++
Sbjct: 269 DFQFYKSGVFTGS----CGTELDHGVTAVGYGVGNDGTKYWLVKNSWGTDWGEEGYIKMQ 324

Query: 336 RNTGKERGVCDINEWAYAP 354
           R      G+C I   A  P
Sbjct: 325 RGVDAAEGLCGIAMEASYP 343


>Medtr4g079470.1 | papain family cysteine protease | HC |
           chr4:30720667-30719276 | 20130731
          Length = 345

 Score =  208 bits (529), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 121/309 (39%), Positives = 174/309 (56%), Gaps = 15/309 (4%)

Query: 54  QQWKKDHGRVYKDLGEMAKKFEIFLSNLKYITESNAKRKSPHDFLLGLNKFADWSAKEF- 112
           +QW   +G+VYKDL E   + +IF  N+ YI  SN    +   + LG+N+FAD + +EF 
Sbjct: 42  EQWMVHYGKVYKDLQERENRLKIFKENVNYIEASNNAGNNKL-YKLGINQFADLTNEEFI 100

Query: 113 --QETYLHELDMPKEESSIMKLDDLPCDAPSSLDWRSKGVVTHVKDQEDCGSCWAFSVVG 170
             +  +   +     ++S  K ++     PS++DWR KG VT VK+Q  CG CWAFS V 
Sbjct: 101 ASRNKFKGHMCSSITKTSTFKYEN--ASVPSTVDWRKKGAVTPVKNQGQCGCCWAFSAVA 158

Query: 171 AIEGINAINTGRLTRLSEQELLDCDR--VSKGCGGGWADKALDWVVRNGGIASEQDYTYT 228
           A EGI+ ++TG+L  LSEQEL+DCD   V +GC GG  D A  ++++N G+ +E  Y Y 
Sbjct: 159 ATEGIHKLSTGKLVSLSEQELVDCDTKGVDQGCEGGLMDDAFKFIIQNHGLNTEAQYPYQ 218

Query: 229 AKQVACKASQIPNNA-TVDGYYHVD-KSENGLLCAAAQQPISVCLYAHSDDFANYNYGVY 286
                C A++   +A T+ GY  V   +E  L  A A QPISV + A   DF  Y  GV+
Sbjct: 219 GVDGTCSANKASIHAVTITGYEDVPANNEQALQKAVANQPISVAIDASGSDFQFYKSGVF 278

Query: 287 DGTNCPVVSVQVNHCMLIVGYD-SVDGQDYWIVKNSWGSTWGMDGYMWIKRNTGKERGVC 345
            G+       +++H +  VGY    DG  YW+VKNSWG+ WG +GY+ ++R      G+C
Sbjct: 279 TGS----CGTELDHGVTAVGYGVGNDGTKYWLVKNSWGTDWGEEGYIKMQRGVDAAEGLC 334

Query: 346 DINEWAYAP 354
            I   A  P
Sbjct: 335 GIAMEASYP 343


>Medtr4g107930.1 | papain family cysteine protease | HC |
           chr4:44732137-44730694 | 20130731
          Length = 345

 Score =  204 bits (520), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 118/316 (37%), Positives = 176/316 (55%), Gaps = 14/316 (4%)

Query: 47  DEAIQLFQQWKKDHGRVYKDLGEMAKKFEIFLSNLKYITESNAKRKSPHDFLLGLNKFAD 106
           D   +  +QW   + +VYKD  E  ++ +IF +N+ YI   N    +   + LG+N+FAD
Sbjct: 34  DSMYERHEQWMSQYSKVYKDPQEREERHKIFTANVNYIEVFNNDANNKL-YKLGINQFAD 92

Query: 107 WSAKEF---QETYLHELDMPKEESSIMKLDDLPCDAPSSLDWRSKGVVTHVKDQEDCGSC 163
            + +EF   +  +   +     +++  K +++    PS++DWR KG VT VK+Q  CG C
Sbjct: 93  LTNEEFIASRNKFKGHMCSSIAKTTTFKYENVSA-IPSTVDWRKKGAVTPVKNQGQCGCC 151

Query: 164 WAFSVVGAIEGINAINTGRLTRLSEQELLDCDR--VSKGCGGGWADKALDWVVRNGGIAS 221
           WAFS V A EGI  ++TG+L  LSEQEL+DCD   V +GC GG  D A  ++++N G+++
Sbjct: 152 WAFSAVAATEGITKLSTGKLVSLSEQELVDCDTKGVDQGCEGGLMDDAFKFIIQNHGLST 211

Query: 222 EQDYTYTAKQVACKASQIP-NNATVDGYYHVD-KSENGLLCAAAQQPISVCLYAHSDDFA 279
           E  Y Y      C A++   + AT+ GY  V   +E  L  A A QPISV + A   DF 
Sbjct: 212 EAAYPYQGVDGTCNANKASIHAATITGYEDVPANNEQALQKAVANQPISVAIDASGSDFQ 271

Query: 280 NYNYGVYDGTNCPVVSVQVNHCMLIVGYD-SVDGQDYWIVKNSWGSTWGMDGYMWIKRNT 338
            Y  GV+ G+       +++H +  VGY    DG  YW+VKNSWG+ WG +GY+ ++R  
Sbjct: 272 FYKSGVFSGS----CGTELDHGVTAVGYGVGNDGTKYWLVKNSWGTDWGEEGYIRMQRGV 327

Query: 339 GKERGVCDINEWAYAP 354
               G+C I   A  P
Sbjct: 328 DAAEGLCGIAMQASYP 343


>Medtr2g064475.1 | papain family cysteine protease | LC |
           chr2:27348422-27349665 | 20130731
          Length = 353

 Score =  201 bits (512), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 124/345 (35%), Positives = 176/345 (51%), Gaps = 48/345 (13%)

Query: 43  LPSQDEAIQLFQQWKKDHGRVYKDLGEMAKKFEIFLSNLKYITESNAKRKSPHDFLLGLN 102
           L S   A    +QW K+ GR Y+D  E  K+F+IF   L+YI   N  R     + LGLN
Sbjct: 6   LESSVTAETRHEQWMKEFGRSYEDDAEKEKRFKIFAEKLEYIERFN--RDGNETYELGLN 63

Query: 103 KFADWSAKEFQETY-LHELDMPKEESSIMKLDDLPC------------------------ 137
           +F+D + +EF   Y    L+    ESSI    ++P                         
Sbjct: 64  QFSDLTYEEFVSAYGCSRLENHLLESSIFNSSEIPTIELPKVPPKRKRSPPSRPPRPPKR 123

Query: 138 ----------DAPSSLDWRSKGVVTHVKDQE---DCGSCWAFSVVGAIEGINAINTGR-L 183
                       P  ++WR KG VT VK+Q+    CGSCWAF+V   +EGI  I   R L
Sbjct: 124 RTPPSTPPTTGIPGRVNWREKGAVTIVKNQDKPKQCGSCWAFAVTATVEGIMKIKQNRPL 183

Query: 184 TRLSEQELLDCDRVSKGCGGGWADKALDWVVRNGGIASEQDYTYTAKQVACKASQIPNNA 243
             LS QEL+DCD+ + GC GG A  A +++V+NG I  + DY Y A+++ C      + A
Sbjct: 184 VALSAQELIDCDQGNNGCDGGKASIAFEYIVKNG-ITRDVDYPYRAQKLGCNRGSKRSFA 242

Query: 244 TVDGYYHVDKSENGLLCAAAQQPISVCLYAHSDDFANYNYGVYDGTNC-PVVSVQVNHCM 302
            + GY  V+  E  LL A A+QP++V + A    F +Y  G+Y    C P  +++VNH +
Sbjct: 243 NIKGYAKVEAGEQNLLEAVARQPVAVYISA-DKHFEDYKGGIYGSGPCKPQTNLKVNHLV 301

Query: 303 LIVGYDSVDGQDYWIVKNSWGSTWGMDGYMWIKRNTGKERGVCDI 347
            +VGY+    +DYW++KNS+G+ WG  GYM +KR       VC I
Sbjct: 302 TVVGYE----EDYWLIKNSYGTGWGETGYMKLKRQGSSPNPVCGI 342


>Medtr7g078600.1 | papain family cysteine protease | LC |
           chr7:29734253-29733107 | 20130731
          Length = 342

 Score =  201 bits (510), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 117/301 (38%), Positives = 168/301 (55%), Gaps = 15/301 (4%)

Query: 51  QLFQQWKKDHGRVYKDLGEMAKKFEIFLSNLKYITESNAKRKSPHDFLLGLNKFADWSAK 110
           + F+ WK  +G VYKD+ E  K F+IF  N+ YI   NA    P+   L +N+F D   +
Sbjct: 40  ERFEYWKTKYGVVYKDVAEQKKHFQIFKHNVAYIDYFNAAGNKPYK--LAINRFVDKPIE 97

Query: 111 EFQETYLHELDMPKEESSIMKLDDLPCDAPSSLDWRSKGVVTHVKDQEDCGSCWAFSVVG 170
           +  + +  E       ++  K +++  D P+++DWR +G VT +K+Q  CGSCWAFS V 
Sbjct: 98  DSDDGF--ERTTTTTPTTTFKYENV-TDIPATVDWRKRGAVTPIKNQGKCGSCWAFSAVA 154

Query: 171 AIEGINAINTGRLTRLSEQELLDCDRV--SKGCGGGWADKALDWVVRNGGIASEQDYTYT 228
           AIEGI  I +G L  LSEQ+L+DCDR   +KGC  G    A  +++ NGGIA+E +Y Y 
Sbjct: 155 AIEGIQKITSGNLVSLSEQQLVDCDRSGRTKGCDNGNMINAFKFILENGGIATEANYPYK 214

Query: 229 AKQVACKASQIPNNATVDGYYHV-DKSENGLLCAAAQQPISVCLYAHSDDFANYNYGVYD 287
            + V     ++ +   +  Y  V   SE+ LL A A QP+SV +      F  Y+ G++ 
Sbjct: 215 -RVVKGTCKKVSHKVQIKSYEEVPSNSEDSLLKAVANQPVSVGIDMRG-MFKFYSSGIFT 272

Query: 288 GTNCPVVSVQVNHCMLIVGY-DSVDGQDYWIVKNSWGSTWGMDGYMWIKRNTGKERGVCD 346
           G        + NH + IVGY  S DG  YW+VKNSW   WG  GY+ IKR+   + G+C 
Sbjct: 273 GE----CGTKPNHALTIVGYGTSKDGIKYWLVKNSWSKRWGEKGYIRIKRDIDAKEGLCG 328

Query: 347 I 347
           I
Sbjct: 329 I 329


>Medtr2g067900.1 | papain family cysteine protease | LC |
           chr2:28418529-28417363 | 20130731
          Length = 328

 Score =  200 bits (509), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 120/306 (39%), Positives = 166/306 (54%), Gaps = 15/306 (4%)

Query: 54  QQWKKDHGRVYKDLGEMAKKFEIFLSNLKYITESNAKRKSPHDFLLGLNKFADWSAKEFQ 113
           +QW K+ GR Y D  E  K+F+IF   L+YI   N  R     + LGLN+++D + +E+ 
Sbjct: 17  EQWMKEFGRTYADDAEKNKRFKIFAEKLEYI--ENFNRDGNATYELGLNQYSDLTDEEYV 74

Query: 114 ETY-LHELDMPKEESSIMKLDDLPCDAPSS---------LDWRSKGVVTHVKDQEDCGSC 163
             Y   +       SSI+ + ++    PS          +DWR  G VT VKDQ DC SC
Sbjct: 75  AKYSCIKFQSKVNYSSILNVSEISTTNPSIKKRKRIPDFVDWRDSGAVTDVKDQGDCASC 134

Query: 164 WAFSVVGAIEGINAINTGRLTRLSEQELLDCDRVSKGCGGGWADKALDWVVRNGGIASEQ 223
           WAF+   A+EGI  I T  LT LS QEL+DCD+ + GC GG  D A D++ +   IA+E 
Sbjct: 135 WAFAAAAAVEGIIQIKTQNLTSLSAQELVDCDKNNFGCEGGHLDTAFDYIAKK-EIATEA 193

Query: 224 DYTYTAKQVACKASQIPNNATVDGYYHVDKSENGLLCAAAQQPISVCLYAHSDDFANYNY 283
           DY Y  KQ  C   +I  +A + GY  V   E  L  A A QP++V +  +  +FANY  
Sbjct: 194 DYPYKDKQGTCLNDKIKRSAKIKGYKIVPSGEANLQEAVANQPVAVGIQTNI-NFANYKG 252

Query: 284 GVYDGTNC-PVVSVQVNHCMLIVGYDSVDGQDYWIVKNSWGSTWGMDGYMWIKRNTGKER 342
           G++    C P+  +++NH +LIVGY   +   YW++KN  G  WG  GYM +KR      
Sbjct: 253 GIFGTGPCKPLPKLKLNHAVLIVGYGGENRNAYWLIKNWRGEGWGEKGYMRVKRQGNSRY 312

Query: 343 GVCDIN 348
            VC IN
Sbjct: 313 SVCGIN 318


>Medtr2g067560.1 | papain family cysteine protease | HC |
           chr2:28285028-28279801 | 20130731
          Length = 906

 Score =  198 bits (503), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 121/314 (38%), Positives = 175/314 (55%), Gaps = 27/314 (8%)

Query: 53  FQQWKKDHGRVYKDLGEMAKKFEIFLSNLKYITESNAKRKSPHDFLLGLNKFADWSAKEF 112
           ++QW K+  R Y D  E  K+F+IF  NL+YI   N  R     + LGLN+F+D + +EF
Sbjct: 16  YEQWMKEFERNYADDAEKEKRFKIFAENLEYI--ENFNRAGKQTYKLGLNQFSDLTNEEF 73

Query: 113 QETYLHELDMPKE-ESS-------IMKLDDL-PCDAPS--------SLDWRSKGVVTHVK 155
              Y + +D+ +E ESS       I  + ++ P ++P         S+DW+  G VT+VK
Sbjct: 74  AALY-NCVDLKRELESSMVSTAGPIFNMSEISPTNSPKGKRKPIPDSVDWKESGAVTNVK 132

Query: 156 DQEDCGSCWAFSVVGAIEGINAINTGR-LTRLSEQELLDCDRVSKGCGGGWADKALDWVV 214
            Q   G C+AF+   A+EGI  I T + LT LS QEL+DCD+ + GC GG   KAL+++ 
Sbjct: 133 RQ---GCCYAFATTAAVEGIMKIKTDKELTSLSMQELVDCDKANGGCEGGSVRKALEYMK 189

Query: 215 RNGGIASEQDYTYTAKQVACKASQIPNNATVDGYYHVDKSENGLLCAAAQQPISVCLYAH 274
            NG IA + DY YT K   C +++    A +DGY  V   E  LL A AQQP++V + A 
Sbjct: 190 TNG-IAKDVDYPYTEKVGTCLSNKKDRAAKIDGYVIVSPGEQNLLEAVAQQPVTVAI-AI 247

Query: 275 SDDFANYNYGVYDGTNC-PVVSVQVNHCMLIVGYDSVDGQDYWIVKNSWGSTWGMDGYMW 333
           +DDF  Y  G++    C P  S+  +H + ++GY       YW++KNS+G  WG  GYM 
Sbjct: 248 NDDFKKYESGIFGSGPCGPKESLNFSHAVTLIGYGGSRRNKYWLIKNSYGDDWGEKGYMR 307

Query: 334 IKRNTGKERGVCDI 347
           +KR       VC +
Sbjct: 308 LKRQGSSSSPVCGL 321


>Medtr2g075830.1 | papain family cysteine protease | HC |
           chr2:31726251-31727821 | 20130731
          Length = 341

 Score =  198 bits (503), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 120/313 (38%), Positives = 175/313 (55%), Gaps = 25/313 (7%)

Query: 47  DEAIQLFQQWKKDHGRVYKDLGEMAKKFEIFLSNLKYITE-SNAKRKSPHDFLLGLNKFA 105
           D   ++ +QW   HG+VYK   E  K+F IF  N+ YI   +N   KS   + LGLN FA
Sbjct: 33  DPMYEMHEQWMVQHGKVYKAAHEKQKRFGIFKENVNYIEAFNNVGNKS---YKLGLNHFA 89

Query: 106 DWSAKEFQET------YLHELDMPKEESSIMKLDDLPCDAPSSLDWRSKGVVTHVKDQED 159
           D +  EF         YLH   +     +  K  ++  D PS++DWR +G VT VK+Q  
Sbjct: 90  DLTNHEFIAARNKFNGYLHGSII-----TTFKYKNVS-DVPSAVDWRQEGAVTPVKNQGQ 143

Query: 160 CGSCWAFSVVGAIEGINAINTGRLTRLSEQELLDCDRVS--KGCGGGWADKALDWVVRNG 217
           CG CWAFS V + EGI+ + TG L  LSEQEL+DCD     +GC GG  D A +++++N 
Sbjct: 144 CGCCWAFSAVASTEGIHKLTTGNLVSLSEQELVDCDTNGEDQGCEGGLMDDAFEFIIQNN 203

Query: 218 GIASEQDYTYTAKQVACKASQIPNN-ATVDGYYHVD-KSENGLLCAAAQQPISVCLYAHS 275
           G+++E +Y Y      C  +++ ++ AT+ GY +V    E  L  A A QP+SV + A  
Sbjct: 204 GLSTEAEYPYQGVDGTCNKTEVGSSAATISGYENVPVNDEQALQKAVANQPVSVAIDASG 263

Query: 276 DDFANYNYGVYDGTNCPVVSVQVNHCMLIVGYDSV-DGQDYWIVKNSWGSTWGMDGYMWI 334
            DF  Y  GV+ G+       +++H + +VGY    D  +YW+VKNSWG+ WG +GY+ +
Sbjct: 264 SDFQFYKSGVFTGS----CGTELDHGVAVVGYGVGEDETEYWLVKNSWGTQWGEEGYIRM 319

Query: 335 KRNTGKERGVCDI 347
           +R      G+C I
Sbjct: 320 QRGVDASEGLCGI 332


>Medtr4g125300.1 | papain family cysteine protease | HC |
           chr4:51952476-51956344 | 20130731
          Length = 350

 Score =  194 bits (494), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 117/331 (35%), Positives = 169/331 (51%), Gaps = 15/331 (4%)

Query: 10  FLLFFICTTFSCLSSSFRIPTPYSSI--MGPNLDKLPSQDEAIQLFQQWKKDHGRVYKDL 67
            L+ F C   +    SF    P   +  M   L ++  +      F ++   +G+ Y  +
Sbjct: 6   LLIVFFCVATAAAGLSFHDSNPIRMVSDMEEQLLQVIGESRHAVSFARFANRYGKRYDTV 65

Query: 68  GEMAKKFEIFLSNLKYITESNAKRKSPHDFLLGLNKFADWSAKEFQETYLHELDMPKEES 127
            EM ++F+IF  NL+ I  +N KR     + LG+N FADW+ +EF+    H L   +  S
Sbjct: 66  DEMKRRFKIFSENLQLIKSTNKKRLG---YTLGVNHFADWTWEEFRS---HRLGAAQNCS 119

Query: 128 SIMKLDDLPCDA--PSSLDWRSKGVVTHVKDQEDCGSCWAFSVVGAIEGINAINTGRLTR 185
           + +K +    D   P+  DWR +G+V+ VKDQ  CGSCW FS  GA+E   A   G+   
Sbjct: 120 ATLKGNHRITDVVLPAEKDWRKEGIVSEVKDQGHCGSCWTFSTTGALESAYAQAFGKNIS 179

Query: 186 LSEQELLDCDRVSK--GCGGGWADKALDWVVRNGGIASEQDYTYTAKQVACKASQIPNNA 243
           LSEQ+L+DC       GC GG   +A +++  NGG+ +E+ Y YT +   CK +      
Sbjct: 180 LSEQQLVDCAGAYNNFGCNGGLPSQAFEYIKYNGGLETEEAYPYTGQNGLCKFTSENVAV 239

Query: 244 TVDGYYHVD-KSENGLLCAAA-QQPISVCLYAHSDDFANYNYGVYDGTNCPVVSVQVNHC 301
            V G  ++   +E+ L  A A  +P+SV      DDF  Y  GVY  T C    + VNH 
Sbjct: 240 QVLGSVNITLGAEDELKHAVAFARPVSVAFQV-VDDFRLYKKGVYTSTTCGSTPMDVNHA 298

Query: 302 MLIVGYDSVDGQDYWIVKNSWGSTWGMDGYM 332
           +L VGY   DG  YW++KNSWG  WG  GY 
Sbjct: 299 VLAVGYGIEDGVPYWLIKNSWGGEWGDHGYF 329


>Medtr7g079230.1 | papain family cysteine protease | LC |
           chr7:30057324-30056171 | 20130731
          Length = 340

 Score =  191 bits (485), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 115/309 (37%), Positives = 169/309 (54%), Gaps = 14/309 (4%)

Query: 51  QLFQQWKKDHGRVYKDLGEMAKKFEIFLSNLKYITESNAKRKSPHDFLLGLNKFADWSAK 110
           + ++ WK  +  +YKD  E  K  +IF  N+ YI   NA       + L +N+FAD   +
Sbjct: 37  ERYKHWKIKYRVIYKDDAEEEKHIQIFKHNVAYIDSFNAA--GNKSYKLTINRFADLPTE 94

Query: 111 EFQETYLHELDMPKEESSIMKLDDLPCDAPSSLDWRSKGVVTHVKDQEDCGSCWAFSVVG 170
              + +  +  +    SS+ K  ++  D P+++DWR +G VT VK+Q +CGSCWAFS VG
Sbjct: 95  PSDDGF-KKRKLEPTTSSLFKYKNI-TDIPAAVDWRKRGAVTPVKNQRECGSCWAFSAVG 152

Query: 171 AIEGINAINTGRLTRLSEQELLDCDRV--SKGCGGGWADKALDWVVRNGGIASEQDYTYT 228
           A+EGI  I +G L  LSEQEL+D  R   + GC GG+   A ++V+ NGGIA+E  Y Y 
Sbjct: 153 ALEGIQQITSGNLVSLSEQELVDRVRSNWTNGCNGGYLIDAFEFVLENGGIATEASYPYR 212

Query: 229 AKQVACKASQIPNNATVDGYYHVDK-SENGLLCAAAQQPISVCLYAHSDDFANYNYGVYD 287
             +    + ++     +  Y  V + SE+ LL   A QP+SV +   S     Y+ G++ 
Sbjct: 213 GVK-GNNSKKVSRQVQIKSYEQVPRNSEDSLLKVVANQPVSVGIDI-SGMIRFYSSGIFT 270

Query: 288 GTNCPVVSVQVNHCMLIVGY-DSVDGQDYWIVKNSWGSTWGMDGYMWIKRNTGKERGVCD 346
           G        + NH ++IVGY  S DG  YW+VKNSWG  WG   Y+ +KR+   + G+C 
Sbjct: 271 GE----CGTKPNHAVIIVGYGTSNDGTKYWLVKNSWGIRWGEKRYIRMKRDIDAKEGLCG 326

Query: 347 INEWAYAPN 355
           I   A  PN
Sbjct: 327 IPMDASYPN 335


>Medtr2g015850.1 | papain family cysteine protease | HC |
           chr2:4742638-4745104 | 20130731
          Length = 364

 Score =  185 bits (469), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 121/296 (40%), Positives = 167/296 (56%), Gaps = 17/296 (5%)

Query: 67  LGEMAKKFEIFLSNLKYITE-SNAKRKSPHDFLLGLNKFADWSAKEFQETYLHELDMPKE 125
           + E+ K+  IF +NL+YI   +NA  KS   + LGLN+++D ++ EF  ++       + 
Sbjct: 76  ISELEKRKRIFKNNLEYIENFNNAGNKS---YKLGLNQYSDLTSDEFLASHTGLKVSKQL 132

Query: 126 ESSIMKLDDLPC----DAPSSLDWRSKGVVTHVKDQEDCGSCWAFSVVGAIEGINAINTG 181
            SS M+   +P     D P++ DWR +G VT VKDQ  CG CWAFSVV A+EG   INTG
Sbjct: 133 SSSKMRSAAVPFNLNDDVPTNFDWRQQGAVTDVKDQGSCGCCWAFSVVAAVEGAVKINTG 192

Query: 182 RLTRLSEQELLDCDRVSKGCGGGWADKALDWVVRNGGIASEQDYTYTAKQVACKAS-QIP 240
            L  LSEQ+L+DCD  + GC GG  D A  ++++  GI SE DY Y      C+ + Q+ 
Sbjct: 193 ELISLSEQQLVDCDERNSGCHGGNMDSAFKYIIQK-GIVSEADYPYQEGSQTCQLNDQMK 251

Query: 241 NNATVDGYYHVDKS-ENGLLCAAAQQPISVCLYAHSDDFANYNYGVYDGTNCPVVSVQVN 299
             A +  +  V  + E  LL A AQQP+SV +    D+F +Y   VY GT        +N
Sbjct: 252 FEAQITNFIDVPANDEQQLLQAVAQQPVSVGIEV-GDEFQHYMGDVYSGT----CGQSMN 306

Query: 300 HCMLIVGYD-SVDGQDYWIVKNSWGSTWGMDGYMWIKRNTGKERGVCDINEWAYAP 354
           H +  VGY  S DG  YW++KNSWG  WG +GYM + R +G+  G C I   A  P
Sbjct: 307 HAVTAVGYGVSEDGTKYWLIKNSWGKGWGEEGYMKLLRESGEPGGQCGIAAHASYP 362


>Medtr4g071060.1 | papain family cysteine protease | HC |
           chr4:26764609-26766750 | 20130731
          Length = 362

 Score =  174 bits (442), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 120/365 (32%), Positives = 191/365 (52%), Gaps = 47/365 (12%)

Query: 10  FLLFFICTTFSCLSSSFRIPTP-YSSIMGPNLDKLPSQDEAIQLFQQWKKDHGRVYKDLG 68
            LLF +   FS   S+F  P      I+   +D+   +  A   F  +K   G+VY    
Sbjct: 6   LLLFVVLFIFSV--SAFSTPDEGEDPIIRQVVDEEGVRLGAEHHFNLFKHKFGKVYSSKD 63

Query: 69  EMAKKFEIFLSNLKYITESNAKRKSPHD--FLLGLNKFADWSAKEFQETYL--HELDMPK 124
           E   +F+IF SNL     + AKR    D   + G+ +F+D + +EF+++ L    + +PK
Sbjct: 64  EHDYRFKIFKSNL-----NRAKRHQLMDPSAVHGVTRFSDLTPREFRKSVLGLRGVGLPK 118

Query: 125 EESS--IMKLDDLPCDAPSSLDWRSKGVVTHVKDQEDCGSCWAFSVVGAIEGINAINTGR 182
           + ++  I+  D+LP D     DWR KG VT VK+Q  CGSCW+FS  GA+EG + ++TG+
Sbjct: 119 DANAAPILPTDNLPKD----FDWREKGAVTAVKNQGSCGSCWSFSTTGALEGAHFLSTGK 174

Query: 183 LTRLSEQELLDCDR---------VSKGCGGGWADKALDWVVRNGGIASEQDYTYTAK-QV 232
           L  LSEQ+L+DCD             GC GG  + A ++++++GG+  E+DY Y+   + 
Sbjct: 175 LVSLSEQQLVDCDHECDPEQPGSCDAGCNGGLMNSAFEYILKSGGVMREEDYPYSGTDRG 234

Query: 233 ACKASQIPNNATVDGYYHVDKSENGLLCAAAQQ-PISVCLYAHSDDFANYNYGVYDGTNC 291
           +CK  +    A+V  +  V   E+ +     +  P+++ L       A Y      G +C
Sbjct: 235 SCKFDKKKIAASVANFSVVSLDEDQIAANLVKNGPLAIALN------AVYMQTYVGGVSC 288

Query: 292 P-VVSVQVNHCMLIVGYDS-------VDGQDYWIVKNSWGSTWGMDGYMWIKRNTGKERG 343
           P + S +++H +L+VGY S       +  + YWI+KNSWG TWG +GY  I R     R 
Sbjct: 289 PYICSKRLDHGVLLVGYGSGAYSPIRLKEKPYWIIKNSWGETWGENGYYKICRG----RN 344

Query: 344 VCDIN 348
           +C ++
Sbjct: 345 ICGVD 349


>Medtr1g023210.1 | papain family cysteine protease | HC |
           chr1:7398040-7401108 | 20130731
          Length = 364

 Score =  170 bits (431), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 106/320 (33%), Positives = 166/320 (51%), Gaps = 41/320 (12%)

Query: 53  FQQWKKDHGRVYKDLGEMAKKFEIFLSNLKYITESNAKRKSPHDFLLGLNKFADWSAKEF 112
           F  +K    + Y    E   +F +F SNL    ++   +K       G+ KF+D +A EF
Sbjct: 51  FTSFKSKFSKNYATKEEHDYRFGVFKSNL---IKAKLHQKLDPSAQHGITKFSDLTASEF 107

Query: 113 QETYL---HELDMPK--EESSIMKLDDLPCDAPSSLDWRSKGVVTHVKDQEDCGSCWAFS 167
           +  +L     L +P   +++ I+  ++LP D     DWR KG VT VKDQ  CGSCWAFS
Sbjct: 108 RRQFLGLNKRLRLPAHAQKAPILPTNNLPED----FDWREKGAVTPVKDQGSCGSCWAFS 163

Query: 168 VVGAIEGINAINTGRLTRLSEQELLDCDRV---------SKGCGGGWADKALDWVVRNGG 218
             GA+EG N + TG+LT LSEQ+L+DCD V           GC GG  + A ++++++GG
Sbjct: 164 TTGALEGANYLATGKLTSLSEQQLVDCDHVCDPEERGSCDSGCNGGLMNNAFEYILQSGG 223

Query: 219 IASEQDYTYTAKQVACKASQIPNNATVDGYYHVDKSENGLLCAAAQQ-PISVCLYAHSDD 277
           + SE+DY YT +  +CK  +    A+V  +  V   E+ +     +  P++V +      
Sbjct: 224 VVSEKDYAYTGRDGSCKFDKSKVVASVSNFSVVSLDEDQIAANLVKNGPLAVAIN----- 278

Query: 278 FANYNYGVYDGTNCPVV--SVQVNHCMLIVGYDS-------VDGQDYWIVKNSWGSTWGM 328
            A +      G +CP +    +++H +L++G+         +  + YWI+KNSWG  WG 
Sbjct: 279 -AAWMQTYMSGVSCPYICAKARLDHGVLLLGFGQGGYAPIRLKEKPYWIIKNSWGQNWGE 337

Query: 329 DGYMWIKRNTGKERGVCDIN 348
           +GY  I R     R VC ++
Sbjct: 338 EGYYKICRG----RNVCGVD 353


>Medtr2g066980.1 | papain family cysteine protease | LC |
           chr2:28003563-28004930 | 20130731
          Length = 323

 Score =  170 bits (430), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 109/317 (34%), Positives = 151/317 (47%), Gaps = 53/317 (16%)

Query: 49  AIQLFQQWKKDHGRVYKDLGEMAKKFEIFLSNLKYITESNAKRKSPHDFLLGLNKFADWS 108
           A +  +QW KD GR Y D  E  K+F+IF  NL+YI   N  R     + LGLN+F D +
Sbjct: 30  AAKTHEQWMKDFGRTYADDVEKEKRFKIFAKNLEYI--ENFNRAGNETYELGLNQFLDLT 87

Query: 109 AKEFQETYLHELDMPKEESSIM----------------KLDDLPCDAPSSLDWRSKGVVT 152
            KEF   Y       K ESS++                 L       P S+DWR  G VT
Sbjct: 88  KKEFTSKYTCANLKGKLESSMVASVAALFNVSKISTNNSLKGKRKPIPESIDWREGGAVT 147

Query: 153 HVKDQEDCGSCWAFSVVGAIEGINAINTGRLTRLSEQELLDCDRVSKGCGGGWADKALDW 212
            VK Q  C SCWAF+ + A+EGI  I    L  LS                G    A D+
Sbjct: 148 SVKRQGACASCWAFATLAAVEGIVQIKNRELVSLS--------------ASGIVKFAYDY 193

Query: 213 VVRNGGIASEQDYTYTAKQVACKASQIPNNATVDGYYHVDKSENGLLCAAAQQPISVCLY 272
           + +N  IASE DY YT K+  C                +   E  LL   AQQP++V L 
Sbjct: 194 IKKN-EIASEADYPYTEKEGKC--------------LSIRSGEENLLEVVAQQPVTV-LI 237

Query: 273 AHSDDFANYNYGVYDGTNC-PVVSVQVNHCMLIVGYDSVDGQDYWIVKNSWGSTWGMDGY 331
           A +++F NY  G++    C P+ S+Q+ H + ++G+ +    +YW++KNS+G +WG  GY
Sbjct: 238 ATNENFVNYKGGIFGSGPCGPIESLQLTHAVTVIGFTN----EYWLIKNSYGESWGEKGY 293

Query: 332 MWIKRNTGKERGVCDIN 348
           M +KR       VC ++
Sbjct: 294 MKLKRKGDSHHTVCGLS 310


>Medtr1g023810.1 | papain family cysteine protease | LC |
           chr1:7670865-7672219 | 20130731
          Length = 267

 Score =  150 bits (378), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 89/215 (41%), Positives = 124/215 (57%), Gaps = 12/215 (5%)

Query: 140 PSSLDWRSKGVVTHVKDQEDCGSCWAFSVVGAIEGINAINTGRLTRLSEQELLDCDRVSK 199
           P  +DWR++G VT VK Q  CGSCWAF+ + A+EG+  I TG L  LS Q L+DCD  S 
Sbjct: 50  PKFVDWRTRGAVTSVKQQRGCGSCWAFATMAALEGLWKIRTGNLISLSAQHLVDCDPGSN 109

Query: 200 GCGGGWADKALDWVV--RNGGIASEQDYTYTAKQVACKASQIPNNATVDGYYHVDKS-EN 256
           GC GG    A+++     +GG+ S+ DY Y   Q  C+   IP +A   G++ +    E+
Sbjct: 110 GCEGGHILSAINFETEQHSGGVPSDFDYPYKGVQEQCRNDIIP-SAGFTGFHSIRPGDEH 168

Query: 257 GLLCAAAQQPISVCLYAHSDDFANY-NYGVYDGTNCPVVSVQVNHCMLIVGYD-SVDGQD 314
            LL A AQQP++  + A + DF N+   G+++G+     + + NH + IVGY  S DG+ 
Sbjct: 169 QLLQAVAQQPVAASVAADT-DFQNFKGSGIFEGS----CANETNHSIAIVGYGVSNDGRK 223

Query: 315 YWIVKNSWGSTWGMDGYMWIKRNTGKERGVCDINE 349
           YWI+KNSWG  WG  GY  + R  G   G C I  
Sbjct: 224 YWIIKNSWGEGWGDLGYAKLIRGNGP-VGNCGITR 257


>Medtr4g072340.1 | papain family cysteine protease | HC |
           chr4:27435998-27437357 | 20130731
          Length = 331

 Score =  149 bits (376), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 110/364 (30%), Positives = 176/364 (48%), Gaps = 65/364 (17%)

Query: 3   ISHTSNIFLLFFICTTFSCLSSSFRIPTPYSSIMGPNLDKLPSQDEAIQLFQQWKKDHGR 62
           ++H +  F+LF +   F  +  +F +P        P + ++  +  A   F ++K+  G+
Sbjct: 1   MNHRNQTFMLFSVLFLFFSVDLAFSMPKDRED---PIIQQVVDKGGAEYQFNEFKQRFGK 57

Query: 63  VYKDLGEMAKKFEIFLSNLKYITESNAKRKSPHD--FLLGLNKFADWSAKEFQETYL--H 118
           VY    E   +F +F SNL       AKR    D     G+ +F+D + +EF+ + L   
Sbjct: 58  VYSSKDEHDYRFNVFKSNLH-----RAKRHGIMDPSATHGVTRFSDLTPREFRNSILGLK 112

Query: 119 ELDMPK--EESSIMKLDDLPCDAPSSLDWRSKGVVTHVKDQEDCGSCWAFSVVGAIEGIN 176
            + +P+  + + I+  ++LP D     DWR KG VT V++Q  CGS W+FS +GA+EG +
Sbjct: 113 GVGLPRHAKAAPILSTENLPRD----FDWREKGAVTPVRNQGFCGSSWSFSTIGALEGAH 168

Query: 177 AINTGRLTRLSEQELLDCDRVSKGCGGGWADKALDWVVRNGGIASEQDYTY----TAKQV 232
            +++G L  LSEQ  +DCD               +++ + GG+   +DYTY    TA+ V
Sbjct: 169 FLSSGELVSLSEQHHVDCDH--------------EYIQKYGGLMRVEDYTYYKTNTARSV 214

Query: 233 ACKASQIPNNATVDGYYHVDKSENGLLCAAAQQPISVCLYAHSDDFANYNYGVYDGTNCP 292
           A   S I   +  D     +  ++G L AA                A Y      G +CP
Sbjct: 215 AANFSSI---SVDDNQITANLVKHGPLAAAIN--------------AVYMQTYVGGISCP 257

Query: 293 VV-SVQVNHCMLIVGYDSVDGQD-------YWIVKNSWGSTWGMDGYMWIKRNTGKERGV 344
            + + +++  +L+VGY S  G D       YWIVKNSWG TWG +GY  I R     R +
Sbjct: 258 YICTRRLDLGVLLVGYGSGAGADMKEKEKPYWIVKNSWGETWGENGYYKICRG----RNI 313

Query: 345 CDIN 348
           C ++
Sbjct: 314 CGVD 317


>Medtr1g094135.1 | papain family cysteine protease | HC |
           chr1:42318672-42321114 | 20130731
          Length = 381

 Score =  146 bits (368), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 100/323 (30%), Positives = 152/323 (47%), Gaps = 36/323 (11%)

Query: 53  FQQWKKDHGRVYKDLGEMAKKFEIFLSNLKYITESNAKRKSPHDFLLGLNKFADWSAKEF 112
           F+ + +D+ + Y    E   +  IF  NL    E  A   +    + G+ +F+D S +EF
Sbjct: 56  FKVFMQDYSKSYSTREEYLLRLGIFAKNLVKAVEHQALDPTA---IHGVTQFSDLSDEEF 112

Query: 113 QETYLHELDMPKEESSIMKLDDLPCDA---PSSLDWRSKGVVTHVKDQEDCGSCWAFSVV 169
           +  Y          + + ++   P D    P + DWR KG VT VK Q  CGSCWAFS  
Sbjct: 113 ERFYTGVRGGFPSSNGVGEVAP-PLDVEGLPENFDWREKGAVTGVKMQGTCGSCWAFSTT 171

Query: 170 GAIEGINAINTGRLTRLSEQELLDCD---------RVSKGCGGGWADKALDWVVRNGGIA 220
           G+IEG N + TG+L  LSEQ+L+DCD             GC GG    A ++++  GG+ 
Sbjct: 172 GSIEGANFLATGKLLSLSEQQLVDCDSKCDITDKTSCDNGCNGGLMTNAYNYLLEAGGLE 231

Query: 221 SEQDYTYTAKQVACKASQIPNNATVDGYYHVDKSENGLLCAAAQQ-PISVCLYAHSDDFA 279
            E  Y YT  +  CK         +  + ++   EN +        P+++ + A    F 
Sbjct: 232 EENAYPYTGGKGECKFDPKKIAVKITNFTNIPVDENQIAAYLVNHGPLAMGVNA---VFM 288

Query: 280 NYNYGVYDGTNCPVVSVQ--VNHCMLIVGYDS-------VDGQDYWIVKNSWGSTWGMDG 330
               G   G +CP++  +  +NH +L+VGY+S       +  + YWI+KNSWG  WG  G
Sbjct: 289 QTYIG---GVSCPLICSKRMLNHGVLLVGYNSQGFSILRLRKKPYWIIKNSWGERWGEKG 345

Query: 331 YMWIKRNTGKERGVCDINEWAYA 353
           Y  + R      G+C +N    A
Sbjct: 346 YYKLCRG----HGMCGMNTMVSA 364


>Medtr4g072790.1 | papain family cysteine protease | HC |
           chr4:27550238-27549054 | 20130731
          Length = 327

 Score =  144 bits (362), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 104/349 (29%), Positives = 171/349 (48%), Gaps = 53/349 (15%)

Query: 10  FLLFFICTTFSCLSSSFRIPTPYSSIMGPNLDKLPSQDEAIQLFQQWKKDHGRVYKDLGE 69
            +LF +   F  +  +F  P        P + ++  +  A   F ++K+  G+VY    E
Sbjct: 8   LMLFSVLFLFFSVDLAFSTPNDRED---PIIQQVVDKGGAEHQFNEFKQRFGKVYSSKDE 64

Query: 70  MAKKFEIFLSNLKYITESNAKRKSPHD--FLLGLNKFADWSAKEFQETYL--HELDMPK- 124
              +F +F SNL       AKR    D     G+ +F+D + +EF+ + L    + +P+ 
Sbjct: 65  HDYRFNVFKSNLH-----RAKRHVIMDPSATHGVTRFSDLTPREFRNSILGLKGVGLPRH 119

Query: 125 -EESSIMKLDDLPCDAPSSLDWRSKGVVTHVKDQEDCGSCWAFSVVGAIEGINAINTGRL 183
            + + I+  ++LP D     DWR KG VT V++Q  CGS W+FS +GA+EG N ++TG L
Sbjct: 120 AKAAPILSSENLPRD----FDWREKGAVTPVRNQGFCGSSWSFSTIGALEGANFLSTGEL 175

Query: 184 TRLSEQELLDCDRVSKGCGGGWADKALDWVVRNGGIASEQDYTYTAKQVACKASQIPNNA 243
             LS+Q+ +DCD               +++ ++GG+   +DYTY    +A   +   ++ 
Sbjct: 176 VSLSDQQHVDCDH--------------EYIKKSGGLMRVEDYTYYKTNIARSVAANFSSV 221

Query: 244 TVDGYYHVDKSENGLLCAAAQQPISVCLYAHSDDFANYNYGVYDGTNCPVV-SVQVNHCM 302
            VD     D+    LL      P++V +       A Y      G +CP   + +++H +
Sbjct: 222 LVDD----DQIAANLL---KYGPLAVAIN------AAYMQTYVGGVSCPYTCTRRLDHGV 268

Query: 303 LIVGYDS---VDGQDYWIVKNSWGSTWGMDGYMWIKRNTGKERGVCDIN 348
           L+VGY S      + YWIVK+SWG TWG +GY  I R     R +C ++
Sbjct: 269 LLVGYGSGAYTKEKPYWIVKSSWGETWGENGYYKICRG----RNICGVD 313


>Medtr4g073660.1 | papain family cysteine protease | HC |
           chr4:27944493-27945667 | 20130731
          Length = 330

 Score =  142 bits (358), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 108/357 (30%), Positives = 170/357 (47%), Gaps = 65/357 (18%)

Query: 10  FLLFFICTTFSCLSSSFRIPTPYSSIMGPNLDKLPSQDEAIQLFQQWKKDHGRVYKDLGE 69
            +LF +   F  +  +F  P        P + ++  +  A   F ++K+  G+VY    E
Sbjct: 7   LMLFSVLFLFFSVDLAFSTPNDRED---PIIQQVVDKGGAEYQFNEFKQRFGKVYSSKDE 63

Query: 70  MAKKFEIFLSNLKYITESNAKRKSPHD--FLLGLNKFADWSAKEFQETYL--HELDMPK- 124
              +F +F SNL       AKR    D     G+ +F+D + +EF+ + L    + +P+ 
Sbjct: 64  HDYRFNVFKSNLH-----RAKRHGIMDPSATHGVTRFSDLTPREFRNSILGLKGVGLPRH 118

Query: 125 -EESSIMKLDDLPCDAPSSLDWRSKGVVTHVKDQEDCGSCWAFSVVGAIEGINAINTGRL 183
            + + I+  ++LP D     DWR KG VT V++Q  CGS W+FS +GA+EG + +++G L
Sbjct: 119 AKAAPILSSENLPRD----FDWREKGAVTPVRNQGFCGSSWSFSTIGALEGAHFLSSGEL 174

Query: 184 TRLSEQELLDCDRVSKGCGGGWADKALDWVVRNGGIASEQDYTY----TAKQVACKASQI 239
             LSEQ  +DCD               +++ + GG+   +DYTY    TA+ VA   S I
Sbjct: 175 VSLSEQHHVDCDH--------------EYIQKYGGLMRVEDYTYYKTNTARSVAANFSSI 220

Query: 240 PNNATVDGYYHVDKSENGLLCAAAQQPISVCLYAHSDDFANYNYGVYDGTNCPVV-SVQV 298
              +  D     +  ++G L AA                A Y      G +CP + + ++
Sbjct: 221 ---SVDDNQIAANLVKHGPLAAAIN--------------AVYMQTYVGGISCPYICTRRL 263

Query: 299 NHCMLIVGYDSVDGQD-------YWIVKNSWGSTWGMDGYMWIKRNTGKERGVCDIN 348
           +  +L+VGY S  G D       YWIVKNSWG TWG +GY  I R     R +C ++
Sbjct: 264 DLGVLLVGYGSGAGADMKEKEKPYWIVKNSWGETWGENGYYKICRG----RNICGVD 316


>Medtr2g015840.1 | papain family cysteine protease | LC |
           chr2:4735030-4736569 | 20130731
          Length = 272

 Score =  134 bits (336), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/324 (30%), Positives = 148/324 (45%), Gaps = 78/324 (24%)

Query: 38  PNLDKLPSQDEAIQLFQQWKKDHGRVYKDLGEMAKKFEIFLSNLKYITE-SNAKRKSPHD 96
           P + +  ++   ++  QQW   + R Y +  EM K+ +IF  NL+YI   +N   KS   
Sbjct: 18  PTMSRTLTESSVVEAHQQWMMKYERTYTNSSEMEKRKKIFKENLEYIENFNNVGNKS--- 74

Query: 97  FLLGLNKFADWSAKEFQETYLHELDMPKEESSIMKLDDLPC----DAPSSLDWRSKGVVT 152
           + LGLN+++D +++EF  ++       +   S M+   +P     D P++ DWR KGVVT
Sbjct: 75  YKLGLNRYSDLTSEEFIASHTGFKVSDQLSDSKMRSVAIPFNLNDDVPTNFDWREKGVVT 134

Query: 153 HVKDQEDCGSCWAFSVVGAIEGINAINTGRLTRLSEQELLDCDRVSKGCGGGWADKALDW 212
            VK+Q                                         + CG  WA      
Sbjct: 135 DVKNQ-----------------------------------------RQCGCCWA------ 147

Query: 213 VVRNGGIASEQDYTYTAKQVACKASQIPNNATVDGYYHVDKS-ENGLLCAAAQQPISVCL 271
                         +TA  VA    QIP  A ++GY+ V  + E  LL A  QQP+SV +
Sbjct: 148 --------------FTA--VAAVEGQIPGAAQINGYFKVPANDEQQLLRAVLQQPVSVAI 191

Query: 272 YAHSDDFANYNYGVYDGTNCPVVSVQVNHCMLIVGYD-SVDGQDYWIVKNSWGSTWGMDG 330
            + S DF +Y  GVY+G+  P    ++NH + I+GY  S  G+ YW++KNSWG TWG  G
Sbjct: 192 -STSYDFHHYMGGVYEGSCGP----KLNHAVTIIGYGVSEAGKKYWLIKNSWGETWGEKG 246

Query: 331 YMWIKRNTGKERGVCDINEWAYAP 354
           YM + R +    G C I   A  P
Sbjct: 247 YMKVLRESSATGGQCSIAVHAAYP 270


>Medtr7g078630.1 | cysteine proteinase superfamily protein | LC |
           chr7:29742896-29746999 | 20130731
          Length = 954

 Score =  131 bits (330), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 94/283 (33%), Positives = 131/283 (46%), Gaps = 47/283 (16%)

Query: 39  NLDKLPSQDEAIQLFQQWKKDHGRVYKDLGEMAKKFEIFLSNLKYITESNAKRKSPHDFL 98
           N  K   +D+  + F+ WK  +G VYKD+ E  K FEIF  N+ YI   NA  +S     
Sbjct: 692 NKKKTDVEDKISERFEHWKTKYGVVYKDVAEKKKHFEIFKHNVIYIESFNADSQSH---- 747

Query: 99  LGLNKFADWSAKEFQETYLHELDMPKEESSIMKLDDLPCDAPSSLDWRSKGVVTHVKDQE 158
            G  +    S++    T                      D P+++ WR +  VT VK+Q 
Sbjct: 748 AGFKRTTRTSSRHKNIT----------------------DIPTNVYWRKRRAVTPVKNQR 785

Query: 159 DCGS-----------CWAFSVVGAIEGINAINTGRLTRLSEQELLDC--DRVSKGCGGGW 205
            CG+           CWAFS V AIEGI  I +G L   SEQ+L+DC     + GC GG 
Sbjct: 786 GCGNIKRHFFLLLLRCWAFSTVAAIEGIQQITSGNLVSFSEQQLVDCVASNWTNGCNGGN 845

Query: 206 ADKALDWVVRNGGIASEQDYTYTAKQVACKASQIPNNATVDGYYHVDK-SENGLLCAAAQ 264
              A  + + NGGIA+E  Y Y  K V   + ++ +   + GY  V K SE+ LL   A 
Sbjct: 846 KIDAFKFNLENGGIATEASYPY--KGVKGNSKKVHHQVQIKGYEQVPKNSEDSLLKVVAN 903

Query: 265 QPISVCLYAHSDDFANYNYGVYDGTNCPVVSVQVNHCMLIVGY 307
           QP+SV +         Y+ G++ G        + NH + IVGY
Sbjct: 904 QPVSVNIDMRG-MLKFYSSGIFTGE----CGTKPNHAVTIVGY 941


>Medtr1g025450.1 | papain family cysteine protease | LC |
           chr1:8137849-8134532 | 20130731
          Length = 550

 Score =  112 bits (279), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 72/182 (39%), Positives = 94/182 (51%), Gaps = 29/182 (15%)

Query: 130 MKLDDLPCDAPSSLDWRSKGVVTHVKDQED-CGSCWAFSVVGAIEGINAINTGRLTRLSE 188
           M LD +P     S+DWR +GVVT +KDQ   CGSCWAF+ +  +EG+  I TG L  LS 
Sbjct: 50  MSLDQIP----KSVDWRERGVVTSIKDQTSWCGSCWAFTTMATLEGLWQIRTGNLISLSA 105

Query: 189 QELLDCDRVSKGCGGGWADKALDWVVRN--GGIASEQDYTYTAKQVACKASQIPNNATVD 246
           Q L+DCD  SKGC  G    A+ +      GG+ SE DY Y A Q  C     P+     
Sbjct: 106 QHLVDCDMGSKGCKNGSVFSAIKFETEQHVGGVPSEVDYPYKAFQGQCHNDITPS----- 160

Query: 247 GYYHVDKSENGLLCAAAQQPISVCLYAHSDDFANYN-YGVYDGTNCPVVSVQVNHCMLIV 305
                      LL   AQQPI+  + A   DF N+   G+++G+     S + NH + IV
Sbjct: 161 -----------LLQVVAQQPIASSV-ATGTDFRNFKGSGIFEGS----CSNKTNHVVAIV 204

Query: 306 GY 307
           GY
Sbjct: 205 GY 206


>Medtr2g016380.1 | cysteine proteinase superfamily protein | HC |
           chr2:5009394-5011100 | 20130731
          Length = 249

 Score =  110 bits (275), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 54/114 (47%), Positives = 76/114 (66%), Gaps = 1/114 (0%)

Query: 243 ATVDGYYHVDKSENGLLCAAAQQPISVCLYAHSDDFANYNYGVYDGTNCPVVSVQVNHCM 302
            T+DGY  V +S++ L CA  +QPISV +   + DF  Y  G+YDG +C      ++H +
Sbjct: 24  VTIDGYTDVTQSDSALFCATVKQPISVGIDGSTLDFQLYTGGIYDG-DCSSNPDDIDHAV 82

Query: 303 LIVGYDSVDGQDYWIVKNSWGSTWGMDGYMWIKRNTGKERGVCDINEWAYAPNQ 356
           LIVGY S   QDYWIVKNSWG++WG++G+++I+RNT  + GVC IN  A  P +
Sbjct: 83  LIVGYGSDGNQDYWIVKNSWGTSWGIEGFIYIRRNTNLKYGVCAINYMASFPTK 136


>Medtr3g029560.1 | papain family cysteine protease | LC |
           chr3:9298075-9297252 | 20130731
          Length = 239

 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 90/203 (44%), Gaps = 29/203 (14%)

Query: 151 VTHVKDQEDCGSCWAFSVVGAIEGINAINTGRLTRLSEQELLDCDRVSKGCGGGWADKAL 210
           +T V DQ   G C+  +V+G +E  N I  G+L RLS QE +DCD  S GC  G      
Sbjct: 50  ITPVLDQLQLGICYYIAVIGTVESANMIAMGKLLRLSIQEPIDCDPGSCGCHHGNHISVF 109

Query: 211 DWVVRNGGIASEQDYTYTAKQVACKASQIPNNATVDGYYHVDKSENGLLC------AAAQ 264
            + ++N GIA  +DY + ++   C A  I +   V        ++ GLL       A + 
Sbjct: 110 AY-IKNNGIALVEDYPFVSETQPCYAKNILHKPRVFINDVTVLNKRGLLGEDELKKAISM 168

Query: 265 QPISVCLYAHSDDFANYNYGVYDGTNCPVVSVQVNHCMLIVGYDSVDGQDYWIVKNSWGS 324
           +P+ V L     +F  +  G++                     ++ D +  W   NS+G 
Sbjct: 169 RPVMVILKV-GYEFFEFKGGIFRT-------------------ETKDPK--WGYHNSYGV 206

Query: 325 TWGMDGYMWIKRNTGKERGVCDI 347
            WG+ GYM ++RN     G C I
Sbjct: 207 RWGIGGYMLLERNNSLLHGRCGI 229


>Medtr7g111060.1 | cathepsin B-like cysteine protease | HC |
           chr7:45547798-45542808 | 20130731
          Length = 359

 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 68/267 (25%), Positives = 110/267 (41%), Gaps = 38/267 (14%)

Query: 103 KFADWSAKEFQETYLHELDMPKEE------SSIMKLDDLPCDAPSSLDWRSKGVVTHVKD 156
           +F++++  +F+   L     PK+E       +  K   LP +  +   W     +  + D
Sbjct: 66  RFSNFTVGQFKR-LLGVKQAPKKELLSTPVVTHPKSLKLPKEFDARTAWSQCSTIGKILD 124

Query: 157 QEDCGSCWAFSVVGAIEGINAINTGRLTRLSEQELLDC--DRVSKGCGGGWADKALDWVV 214
           Q  CGSCWAF  V +++    I+      LS  +LL C       GC GG    A  ++ 
Sbjct: 125 QGHCGSCWAFGAVESLQDRFCIHFDMNISLSVNDLLACCGFLCGAGCDGGTPIYAWRYLA 184

Query: 215 RNGGIASEQDYTYTAKQVACK------ASQIPN----------------NATVDGYYHVD 252
            +G +  E D  +   Q+ C       A Q P                 + +V  Y    
Sbjct: 185 HHGVVTEECDPYF--DQIGCSHPGCEPAYQTPKCVRKCVKGNQIWKRSKHYSVKAYRVKS 242

Query: 253 KSENGLLCAAAQQPISVCLYAHSDDFANYNYGVYDGTNCPVVSVQVNHCMLIVGYDSVD- 311
             ++ +       P+ V      +DFA+Y  GVY       +     H + ++G+ + D 
Sbjct: 243 DPQDIMAEVYKNGPVEVAFTVF-EDFAHYKSGVYKHITGSALG---GHAVKLIGWGTSDE 298

Query: 312 GQDYWIVKNSWGSTWGMDGYMWIKRNT 338
           G+DYW++ N W + WG DGY  IKR T
Sbjct: 299 GEDYWLLANQWNTNWGDDGYFKIKRGT 325


>Medtr7g111050.1 | cathepsin B-like cysteine protease | HC |
           chr7:45540655-45535648 | 20130731
          Length = 356

 Score = 75.9 bits (185), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 111/267 (41%), Gaps = 34/267 (12%)

Query: 103 KFADWSAKEFQETYLHELDMPKEESSIM------KLDDLPCDAPSSLDWRSKGVVTHVKD 156
           +F++++  +F+   L     P+ E S        K   LP D  +   W     +  + D
Sbjct: 63  RFSNFTVGQFKR-LLGVKQTPRSELSSAPVVTHPKSLKLPKDFDARTAWSQCSTIGRILD 121

Query: 157 QEDCGSCWAFSVVGAIEGINAINTGRLTRLSEQELLDCDRV--SKGCGGGWADKALDWVV 214
           Q  CGSCWAF  V ++     I+      LS  ++L C  +    GC GG    A  ++ 
Sbjct: 122 QGHCGSCWAFGAVESLSDRFCIHFDMNVSLSVNDILACCGLLCGAGCAGGTPFSAWIYLA 181

Query: 215 RNGGIASEQDYTY------------TAKQVACKASQIPNN---ATVDGY----YHVDKSE 255
            +G +  E D  +            T +   C    +  N    T   Y    Y V+   
Sbjct: 182 HHGVVTEECDPYFDQIGCSHPGCEPTYRTPKCVKKCVNGNQLWETSKHYSVKAYTVNSDP 241

Query: 256 NGLLCAAAQQ-PISVCLYAHSDDFANYNYGVYDGTNCPVVSVQVNHCMLIVGY-DSVDGQ 313
             ++    +  P+ V    + +DFA+Y  GVY       +     H + +VG+  S +G+
Sbjct: 242 QDIMAEVYKNGPVEVAFTVY-EDFAHYKSGVYKHITGFALG---GHAVKLVGWGTSHEGE 297

Query: 314 DYWIVKNSWGSTWGMDGYMWIKRNTGK 340
           DYW++ N W + WG DGY  IKR T +
Sbjct: 298 DYWLLANQWNTNWGDDGYFKIKRGTNE 324


>Medtr7g078310.1 | papain family cysteine protease | LC |
           chr7:29607978-29606369 | 20130731
          Length = 263

 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/133 (33%), Positives = 67/133 (50%), Gaps = 9/133 (6%)

Query: 99  LGLNKFADWSAKEFQETYLHELDMPKEESSIMKLDDLPCDAPSSLDWRSKGVVTHVKDQE 158
           L +N FAD   K+ Q          +  ++  +  ++  D P+++DWR +  VT VK+Q 
Sbjct: 117 LAINGFADQPIKDSQS----HAGFKRTTTTSSRHKNIT-DIPTAVDWRKRRAVTPVKNQR 171

Query: 159 DCGSCWAFSVVGA--IEGINAINTGRLTRLSEQELLDC--DRVSKGCGGGWADKALDWVV 214
            C +       G   IEGI  I +G L   SEQ+L+DC     + GC GG    A  +++
Sbjct: 172 GCVTLLGIFYGGCNRIEGIQQIISGNLVSFSEQQLVDCVTSNWTNGCNGGNKIDAFKFIL 231

Query: 215 RNGGIASEQDYTY 227
            NGGIA+E  Y Y
Sbjct: 232 ENGGIATEASYPY 244


>Medtr7g078580.1 | papain family cysteine protease | HC |
           chr7:29730091-29729708 | 20130731
          Length = 127

 Score = 68.9 bits (167), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 40/94 (42%), Positives = 53/94 (56%), Gaps = 6/94 (6%)

Query: 255 ENGLLCAAAQQPISVCLYAHSDDFANYNYGVYDGTNCPVVSVQVNHCMLIVGY-DSVDGQ 313
           E+ LL A A QP+SV +      F  Y+ G++ G  C     + NH + IVGY  S DG 
Sbjct: 5   EDSLLKAVANQPVSVSIDMRGM-FKFYSSGIFTG-EC---RTKPNHAVTIVGYGTSKDGI 59

Query: 314 DYWIVKNSWGSTWGMDGYMWIKRNTGKERGVCDI 347
            YW+VKNSW   WG  GY+ IKR+   + G+C I
Sbjct: 60  KYWLVKNSWSKRWGEKGYIRIKRDIDAKEGLCGI 93


>Medtr7g079130.1 | papain family cysteine protease | HC |
           chr7:29935774-29934761 | 20130731
          Length = 97

 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 38/95 (40%), Positives = 52/95 (54%), Gaps = 5/95 (5%)

Query: 261 AAAQQPISVCLYAHSDDFANYNYGVYDGTNCPVVSVQVNHCMLIVGYD-SVDGQDYWIVK 319
             A QP+SV +      F  Y+ G+  G        Q NH + IVGY  S DG  YW+VK
Sbjct: 6   TVANQPVSVNIDVIRGMFRFYSSGISTGE----CGTQGNHAVTIVGYGTSNDGTKYWLVK 61

Query: 320 NSWGSTWGMDGYMWIKRNTGKERGVCDINEWAYAP 354
           NSWG++WG  GY+ +KR+   + G+C I   A+ P
Sbjct: 62  NSWGTSWGEKGYIRMKRDIDAKEGLCGIAMNAFYP 96


>Medtr8g087510.1 | papain family cysteine protease | LC |
           chr8:36164675-36165648 | 20130731
          Length = 174

 Score = 65.9 bits (159), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 64/134 (47%), Gaps = 15/134 (11%)

Query: 180 TGRLTRLSEQELLDCDRVSKGCGGGWADKALDWVVRNGGIASEQDYTYTAKQVACKASQI 239
           TG L  LSEQ+LLDCD+   GC GGW   A  ++++  G+  E++Y +  ++ +CK  + 
Sbjct: 23  TGHLVSLSEQQLLDCDQSDFGCQGGWMSNAFQYIIQARGLMEEKEYAFAGREGSCKFEKS 82

Query: 240 PNNATVDGYYHVDKSENGLLCAAAQQPISVCLYAHSDDFANYNYGVYD----GTNCPVVS 295
              A+V  Y  V          A Q  IS  +  H       N         G +CP V 
Sbjct: 83  EIMASVSNYNMV---------YADQYQISASIVKHGPVSTAINAAWMQTYVCGVSCPDVC 133

Query: 296 VQ--VNHCMLIVGY 307
            +  ++H +L+VG+
Sbjct: 134 AKEDLSHAVLLVGF 147


>Medtr2g047960.1 | papain family cysteine protease | LC |
           chr2:21199046-21199547 | 20130731
          Length = 99

 Score = 62.8 bits (151), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 33/79 (41%), Positives = 47/79 (59%), Gaps = 1/79 (1%)

Query: 148 KGVVTHVKDQEDCGSCWAFSVVGAIEGINAINTGRLTRLSEQELLDCD-RVSKGCGGGWA 206
           KGVVT+VK    CGSC AFS    +E +N   T +L  LSEQEL+DCD + ++GC     
Sbjct: 7   KGVVTNVKHLGQCGSCQAFSTNVVVESLNQRKTSKLGLLSEQELIDCDNQENQGCNSALM 66

Query: 207 DKALDWVVRNGGIASEQDY 225
           + A ++  +  G+ +E  Y
Sbjct: 67  EYAFEYFKQKCGLTTESYY 85


>Medtr7g111050.2 | cathepsin B-like cysteine protease | HC |
           chr7:45540635-45536215 | 20130731
          Length = 297

 Score = 52.0 bits (123), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 58/244 (23%), Positives = 97/244 (39%), Gaps = 34/244 (13%)

Query: 103 KFADWSAKEFQETYLHELDMPKEESSIM------KLDDLPCDAPSSLDWRSKGVVTHVKD 156
           +F++++  +F+   L     P+ E S        K   LP D  +   W     +  + D
Sbjct: 58  RFSNFTVGQFKR-LLGVKQTPRSELSSAPVVTHPKSLKLPKDFDARTAWSQCSTIGRILD 116

Query: 157 QEDCGSCWAFSVVGAIEGINAINTGRLTRLSEQELLDCDRV--SKGCGGGWADKALDWVV 214
           Q  CGSCWAF  V ++     I+      LS  ++L C  +    GC GG    A  ++ 
Sbjct: 117 QGHCGSCWAFGAVESLSDRFCIHFDMNVSLSVNDILACCGLLCGAGCAGGTPFSAWIYLA 176

Query: 215 RNGGIASEQDYTY------------TAKQVACKASQIPNN---ATVDGY----YHVDKSE 255
            +G +  E D  +            T +   C    +  N    T   Y    Y V+   
Sbjct: 177 HHGVVTEECDPYFDQIGCSHPGCEPTYRTPKCVKKCVNGNQLWETSKHYSVKAYTVNSDP 236

Query: 256 NGLLCAAAQQ-PISVCLYAHSDDFANYNYGVYDGTNCPVVSVQVNHCMLIVGY-DSVDGQ 313
             ++    +  P+ V    + +DFA+Y  GVY       +     H + +VG+  S +G+
Sbjct: 237 QDIMAEVYKNGPVEVAFTVY-EDFAHYKSGVYKHITGFALG---GHAVKLVGWGTSHEGE 292

Query: 314 DYWI 317
           DYW+
Sbjct: 293 DYWV 296


>Medtr1g025370.1 | cathepsin propeptide inhibitor domain protein |
           HC | chr1:8107105-8107674 | 20130731
          Length = 97

 Score = 51.2 bits (121), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 12/100 (12%)

Query: 9   IFLLFFICTTFSCLSSSFRIPTPYSSIMGPNLDKLPSQDEAI--QLFQQWKKDHGRVYKD 66
           + ++ F+ + +S +  S   PT    I     +  P+  EA   +LF  W  +H R Y  
Sbjct: 8   VLMMIFLASAYSVVDES---PT----ITLSEFESYPTLSEASVDKLFHDWMLEHNRTYSS 60

Query: 67  LGEMAKKFEIFLSNLKYITESNAKRKSPHDFLLGLNKFAD 106
             EM K+ E+F   L+++ E N   K  H + +G+N+F+D
Sbjct: 61  SNEMKKRRELFKKKLEHVKEFN---KGNHSYTIGINQFSD 97


>Medtr1g042480.1 | cathepsin propeptide inhibitor domain protein |
           LC | chr1:15848320-15847811 | 20130731
          Length = 127

 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 2/60 (3%)

Query: 53  FQQWKKDHGRVYKDLGEMAKKFEIFLSNLKYITESNAKRKSPHDFLLGLNKFADWSAKEF 112
           FQQW  ++GR Y +  EM K+  IF   LKY+ + N  +     + +GLN+++DW+ +E+
Sbjct: 37  FQQWIHEYGRTYSNTTEMNKRRVIFKEELKYVKKFN--KAGDEGYTIGLNQYSDWTDEEY 94


>Medtr1g042360.1 | cathepsin propeptide inhibitor domain protein |
           LC | chr1:15843580-15843072 | 20130731
          Length = 127

 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 2/60 (3%)

Query: 53  FQQWKKDHGRVYKDLGEMAKKFEIFLSNLKYITESNAKRKSPHDFLLGLNKFADWSAKEF 112
           FQQW  ++GR Y +  EM K+  IF   LKY+ + N  +     + +GLN+++DW+ +E+
Sbjct: 37  FQQWIHEYGRTYSNTTEMNKRRVIFKEELKYVKKFN--KAGDEGYTIGLNQYSDWTDEEY 94