Miyakogusa Predicted Gene
- Lj6g3v1995740.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1995740.1 Non Characterized Hit- tr|K4BZM2|K4BZM2_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,38.58,0.000000000000001,TRANSCRIPTION FACTOR IIIB,NULL;
TRANSCRIPTION INITIATION FACTOR IIB-RELATED,Transcription factor
TFI,CUFF.60410.1
(539 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g031410.1 | zinc ion-binding; transcription regulators pro... 649 0.0
Medtr2g031410.2 | zinc ion-binding; transcription regulators pro... 481 e-136
Medtr6g027510.1 | transcription factor, putative | HC | chr6:950... 55 2e-07
>Medtr2g031410.1 | zinc ion-binding; transcription regulators
protein, putative | HC | chr2:11799480-11801302 |
20130731
Length = 532
Score = 649 bits (1673), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/539 (60%), Positives = 391/539 (72%), Gaps = 7/539 (1%)
Query: 1 MSSSNSCIHCGKRSFTRDDTTGELFCSSCSAVQPFDNFEAQIGGINGPVGTFIRVGTAGA 60
MS+S CI+C K SFTRDD TG FCSSC A Q FD FE GINGP GTFI +GT+G+
Sbjct: 1 MSTSRRCINCSKTSFTRDDETGGSFCSSCGAEQHFDQFETYTIGINGPQGTFIHIGTSGS 60
Query: 61 GSHYSYKDRKLFTANTTIEELTHRLGLGSKTVDVKSMISQITEGEFGMGHWFEVLIGACA 120
G+ YSYKDRKLF+A +IE+ T +LGL SK +++ +MIS IT+GEFG G WF+VLIGAC
Sbjct: 61 GTIYSYKDRKLFSARNSIEQFTIKLGLSSKKIEINTMISDITDGEFGQGDWFQVLIGACC 120
Query: 121 YVIMRKDDRPLPMAEVASAVDSDVYELGRMILRVIDFLGLKRPDFPEFDIVHSLERTLKN 180
YV+MR+D+R L M EVA+AV DV+ELG+M++RV+D+L L+ DFP+FDIVH L+R++ +
Sbjct: 121 YVVMRRDERALSMNEVANAVGCDVFELGKMVIRVVDYLDLRGSDFPDFDIVHLLKRSVDS 180
Query: 181 SPSFADVEGWTLDRMRKQGVFLIQCAVKWYLSTGRRXXXXXXXXXXXXXXXXXXXXRMDD 240
F +V+ +DRM+KQGVFL+QCAVK +LSTGRR R++D
Sbjct: 181 CRCFREVDRSLVDRMKKQGVFLLQCAVKLFLSTGRRPLPLVVAVLVLVAEINGVDIRLED 240
Query: 241 LAKEVHAVVSTCRTRYRELLETLVKVAQVLPWGKDITTKNIVRNAPFVIQYMEKKSMSKP 300
LAKEVHA+VSTCRTRYRELLETLV VAQVLPWGKDIT KNI++NAPFVIQYMEKKSMSKP
Sbjct: 241 LAKEVHAIVSTCRTRYRELLETLVNVAQVLPWGKDITKKNIIKNAPFVIQYMEKKSMSKP 300
Query: 301 GEKRKNLDQPRLDLADVVAECLRQDDDDGGCEYGFIGIASRKDSQYFSLGSNADLAAIKD 360
EKRK++DQ LDLADVV ECL Q +G EYG G+ RKDSQYFSL SN D I D
Sbjct: 301 VEKRKDVDQTGLDLADVVDECLTQ---EGQYEYGVDGLIHRKDSQYFSLQSNCDREGIVD 357
Query: 361 VDGFQISPECLSMLYKRFLEENRGAKFSNSDNAQKFQWSGLNLQDCREWWDGXXXXXXXX 420
+ QISPECLS++Y +FL ENR A S S N QK + L+ Q EWW+
Sbjct: 358 DERLQISPECLSLMYDKFLNENRDAMSSRSANVQKRKRLELDFQ---EWWNEESELSRKL 414
Query: 421 XXXXXXXXDVGMDAMPPSFVTGQLKYKRRQEKINAAKMRIKRIAQPSEDGLGDILNPDLL 480
D+G++ MPPSFV GQLK K R+EKINAAK RIKRI P LGD N +L
Sbjct: 415 ILKELLEKDIGVETMPPSFVNGQLKCKMRREKINAAKKRIKRITHPLHSDLGDTANLGIL 474
Query: 481 DDSYPERRRKKRRGTVVDDIDWEDLIIETLILHQVKEEDIEKGHYNTLLDLYVFNSGIV 539
D + E R+KKRRG VD IDWEDLIIETL+LHQVK+E+IEKGHYNTLL LYVFNSG+V
Sbjct: 475 DSTCTE-RKKKRRGMAVDGIDWEDLIIETLVLHQVKDEEIEKGHYNTLLGLYVFNSGVV 532
>Medtr2g031410.2 | zinc ion-binding; transcription regulators
protein, putative | HC | chr2:11799492-11801302 |
20130731
Length = 409
Score = 481 bits (1239), Expect = e-136, Method: Compositional matrix adjust.
Identities = 249/416 (59%), Positives = 297/416 (71%), Gaps = 7/416 (1%)
Query: 124 MRKDDRPLPMAEVASAVDSDVYELGRMILRVIDFLGLKRPDFPEFDIVHSLERTLKNSPS 183
MR+D+R L M EVA+AV DV+ELG+M++RV+D+L L+ DFP+FDIVH L+R++ +
Sbjct: 1 MRRDERALSMNEVANAVGCDVFELGKMVIRVVDYLDLRGSDFPDFDIVHLLKRSVDSCRC 60
Query: 184 FADVEGWTLDRMRKQGVFLIQCAVKWYLSTGRRXXXXXXXXXXXXXXXXXXXXRMDDLAK 243
F +V+ +DRM+KQGVFL+QCAVK +LSTGRR R++DLAK
Sbjct: 61 FREVDRSLVDRMKKQGVFLLQCAVKLFLSTGRRPLPLVVAVLVLVAEINGVDIRLEDLAK 120
Query: 244 EVHAVVSTCRTRYRELLETLVKVAQVLPWGKDITTKNIVRNAPFVIQYMEKKSMSKPGEK 303
EVHA+VSTCRTRYRELLETLV VAQVLPWGKDIT KNI++NAPFVIQYMEKKSMSKP EK
Sbjct: 121 EVHAIVSTCRTRYRELLETLVNVAQVLPWGKDITKKNIIKNAPFVIQYMEKKSMSKPVEK 180
Query: 304 RKNLDQPRLDLADVVAECLRQDDDDGGCEYGFIGIASRKDSQYFSLGSNADLAAIKDVDG 363
RK++DQ LDLADVV ECL Q +G EYG G+ RKDSQYFSL SN D I D +
Sbjct: 181 RKDVDQTGLDLADVVDECLTQ---EGQYEYGVDGLIHRKDSQYFSLQSNCDREGIVDDER 237
Query: 364 FQISPECLSMLYKRFLEENRGAKFSNSDNAQKFQWSGLNLQDCREWWDGXXXXXXXXXXX 423
QISPECLS++Y +FL ENR A S S N QK + L+ Q EWW+
Sbjct: 238 LQISPECLSLMYDKFLNENRDAMSSRSANVQKRKRLELDFQ---EWWNEESELSRKLILK 294
Query: 424 XXXXXDVGMDAMPPSFVTGQLKYKRRQEKINAAKMRIKRIAQPSEDGLGDILNPDLLDDS 483
D+G++ MPPSFV GQLK K R+EKINAAK RIKRI P LGD N +LD +
Sbjct: 295 ELLEKDIGVETMPPSFVNGQLKCKMRREKINAAKKRIKRITHPLHSDLGDTANLGILDST 354
Query: 484 YPERRRKKRRGTVVDDIDWEDLIIETLILHQVKEEDIEKGHYNTLLDLYVFNSGIV 539
E R+KKRRG VD IDWEDLIIETL+LHQVK+E+IEKGHYNTLL LYVFNSG+V
Sbjct: 355 CTE-RKKKRRGMAVDGIDWEDLIIETLVLHQVKDEEIEKGHYNTLLGLYVFNSGVV 409
>Medtr6g027510.1 | transcription factor, putative | HC |
chr6:9506956-9492623 | 20130731
Length = 624
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 99/229 (43%), Gaps = 36/229 (15%)
Query: 6 SCIHCGKR-SFTRDDTTGELFCSSCSAV--------QPFDNFEAQIGGINGPVGTFIRVG 56
+C HC + S TR D G+L C C V +P F+ G + G IR
Sbjct: 3 NCDHCLRNVSGTRIDE-GQLCCEYCGKVLEECFLSNEP--TFQKGAAGQSKFSGNLIRAV 59
Query: 57 TAGAGSHYSYKDRKLFTANTTIEELTHRLGLGSKTVDVKSMISQIT--EGEFGMGHWFEV 114
A S DR A I L LG+ +V ++ I E F G E+
Sbjct: 60 NEMADSRQRTTDR----ATENIRNLCRNLGMDDYSVADAAVKFYIIGLEKNFTRGRRSEL 115
Query: 115 LIGACAYVIMRKDDRPLPMAEVASAVDSDVYELGRMILRVIDFLGLKRPDFPEFDIVHSL 174
+ AC Y+ R +D+P + + ++A+ ++VY LG + L+++ L L+ H +
Sbjct: 116 VQAACLYLAFRDNDKPYLLIDFSNAIRTNVYALGSVFLQLLKVLRLEE---------HPI 166
Query: 175 ERTLKNSPSFADVEGWTLDRMRKQGVFLIQCAV-------KWYLSTGRR 216
R L + F + +T ++++ V + + A+ + ++ TGR+
Sbjct: 167 ARKLVDPSLF--IFKFTHTLLKQRNVAVSESALNILSDMKRNWMQTGRK 213