Miyakogusa Predicted Gene

Lj6g3v1995740.1
Show Alignment: 

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1995740.1 Non Characterized Hit- tr|K4BZM2|K4BZM2_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,38.58,0.000000000000001,TRANSCRIPTION FACTOR IIIB,NULL;
TRANSCRIPTION INITIATION FACTOR IIB-RELATED,Transcription factor
TFI,CUFF.60410.1
         (539 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g031410.1 | zinc ion-binding; transcription regulators pro...   649   0.0  
Medtr2g031410.2 | zinc ion-binding; transcription regulators pro...   481   e-136
Medtr6g027510.1 | transcription factor, putative | HC | chr6:950...    55   2e-07

>Medtr2g031410.1 | zinc ion-binding; transcription regulators
           protein, putative | HC | chr2:11799480-11801302 |
           20130731
          Length = 532

 Score =  649 bits (1673), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/539 (60%), Positives = 391/539 (72%), Gaps = 7/539 (1%)

Query: 1   MSSSNSCIHCGKRSFTRDDTTGELFCSSCSAVQPFDNFEAQIGGINGPVGTFIRVGTAGA 60
           MS+S  CI+C K SFTRDD TG  FCSSC A Q FD FE    GINGP GTFI +GT+G+
Sbjct: 1   MSTSRRCINCSKTSFTRDDETGGSFCSSCGAEQHFDQFETYTIGINGPQGTFIHIGTSGS 60

Query: 61  GSHYSYKDRKLFTANTTIEELTHRLGLGSKTVDVKSMISQITEGEFGMGHWFEVLIGACA 120
           G+ YSYKDRKLF+A  +IE+ T +LGL SK +++ +MIS IT+GEFG G WF+VLIGAC 
Sbjct: 61  GTIYSYKDRKLFSARNSIEQFTIKLGLSSKKIEINTMISDITDGEFGQGDWFQVLIGACC 120

Query: 121 YVIMRKDDRPLPMAEVASAVDSDVYELGRMILRVIDFLGLKRPDFPEFDIVHSLERTLKN 180
           YV+MR+D+R L M EVA+AV  DV+ELG+M++RV+D+L L+  DFP+FDIVH L+R++ +
Sbjct: 121 YVVMRRDERALSMNEVANAVGCDVFELGKMVIRVVDYLDLRGSDFPDFDIVHLLKRSVDS 180

Query: 181 SPSFADVEGWTLDRMRKQGVFLIQCAVKWYLSTGRRXXXXXXXXXXXXXXXXXXXXRMDD 240
              F +V+   +DRM+KQGVFL+QCAVK +LSTGRR                    R++D
Sbjct: 181 CRCFREVDRSLVDRMKKQGVFLLQCAVKLFLSTGRRPLPLVVAVLVLVAEINGVDIRLED 240

Query: 241 LAKEVHAVVSTCRTRYRELLETLVKVAQVLPWGKDITTKNIVRNAPFVIQYMEKKSMSKP 300
           LAKEVHA+VSTCRTRYRELLETLV VAQVLPWGKDIT KNI++NAPFVIQYMEKKSMSKP
Sbjct: 241 LAKEVHAIVSTCRTRYRELLETLVNVAQVLPWGKDITKKNIIKNAPFVIQYMEKKSMSKP 300

Query: 301 GEKRKNLDQPRLDLADVVAECLRQDDDDGGCEYGFIGIASRKDSQYFSLGSNADLAAIKD 360
            EKRK++DQ  LDLADVV ECL Q   +G  EYG  G+  RKDSQYFSL SN D   I D
Sbjct: 301 VEKRKDVDQTGLDLADVVDECLTQ---EGQYEYGVDGLIHRKDSQYFSLQSNCDREGIVD 357

Query: 361 VDGFQISPECLSMLYKRFLEENRGAKFSNSDNAQKFQWSGLNLQDCREWWDGXXXXXXXX 420
            +  QISPECLS++Y +FL ENR A  S S N QK +   L+ Q   EWW+         
Sbjct: 358 DERLQISPECLSLMYDKFLNENRDAMSSRSANVQKRKRLELDFQ---EWWNEESELSRKL 414

Query: 421 XXXXXXXXDVGMDAMPPSFVTGQLKYKRRQEKINAAKMRIKRIAQPSEDGLGDILNPDLL 480
                   D+G++ MPPSFV GQLK K R+EKINAAK RIKRI  P    LGD  N  +L
Sbjct: 415 ILKELLEKDIGVETMPPSFVNGQLKCKMRREKINAAKKRIKRITHPLHSDLGDTANLGIL 474

Query: 481 DDSYPERRRKKRRGTVVDDIDWEDLIIETLILHQVKEEDIEKGHYNTLLDLYVFNSGIV 539
           D +  E R+KKRRG  VD IDWEDLIIETL+LHQVK+E+IEKGHYNTLL LYVFNSG+V
Sbjct: 475 DSTCTE-RKKKRRGMAVDGIDWEDLIIETLVLHQVKDEEIEKGHYNTLLGLYVFNSGVV 532


>Medtr2g031410.2 | zinc ion-binding; transcription regulators
           protein, putative | HC | chr2:11799492-11801302 |
           20130731
          Length = 409

 Score =  481 bits (1239), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 249/416 (59%), Positives = 297/416 (71%), Gaps = 7/416 (1%)

Query: 124 MRKDDRPLPMAEVASAVDSDVYELGRMILRVIDFLGLKRPDFPEFDIVHSLERTLKNSPS 183
           MR+D+R L M EVA+AV  DV+ELG+M++RV+D+L L+  DFP+FDIVH L+R++ +   
Sbjct: 1   MRRDERALSMNEVANAVGCDVFELGKMVIRVVDYLDLRGSDFPDFDIVHLLKRSVDSCRC 60

Query: 184 FADVEGWTLDRMRKQGVFLIQCAVKWYLSTGRRXXXXXXXXXXXXXXXXXXXXRMDDLAK 243
           F +V+   +DRM+KQGVFL+QCAVK +LSTGRR                    R++DLAK
Sbjct: 61  FREVDRSLVDRMKKQGVFLLQCAVKLFLSTGRRPLPLVVAVLVLVAEINGVDIRLEDLAK 120

Query: 244 EVHAVVSTCRTRYRELLETLVKVAQVLPWGKDITTKNIVRNAPFVIQYMEKKSMSKPGEK 303
           EVHA+VSTCRTRYRELLETLV VAQVLPWGKDIT KNI++NAPFVIQYMEKKSMSKP EK
Sbjct: 121 EVHAIVSTCRTRYRELLETLVNVAQVLPWGKDITKKNIIKNAPFVIQYMEKKSMSKPVEK 180

Query: 304 RKNLDQPRLDLADVVAECLRQDDDDGGCEYGFIGIASRKDSQYFSLGSNADLAAIKDVDG 363
           RK++DQ  LDLADVV ECL Q   +G  EYG  G+  RKDSQYFSL SN D   I D + 
Sbjct: 181 RKDVDQTGLDLADVVDECLTQ---EGQYEYGVDGLIHRKDSQYFSLQSNCDREGIVDDER 237

Query: 364 FQISPECLSMLYKRFLEENRGAKFSNSDNAQKFQWSGLNLQDCREWWDGXXXXXXXXXXX 423
            QISPECLS++Y +FL ENR A  S S N QK +   L+ Q   EWW+            
Sbjct: 238 LQISPECLSLMYDKFLNENRDAMSSRSANVQKRKRLELDFQ---EWWNEESELSRKLILK 294

Query: 424 XXXXXDVGMDAMPPSFVTGQLKYKRRQEKINAAKMRIKRIAQPSEDGLGDILNPDLLDDS 483
                D+G++ MPPSFV GQLK K R+EKINAAK RIKRI  P    LGD  N  +LD +
Sbjct: 295 ELLEKDIGVETMPPSFVNGQLKCKMRREKINAAKKRIKRITHPLHSDLGDTANLGILDST 354

Query: 484 YPERRRKKRRGTVVDDIDWEDLIIETLILHQVKEEDIEKGHYNTLLDLYVFNSGIV 539
             E R+KKRRG  VD IDWEDLIIETL+LHQVK+E+IEKGHYNTLL LYVFNSG+V
Sbjct: 355 CTE-RKKKRRGMAVDGIDWEDLIIETLVLHQVKDEEIEKGHYNTLLGLYVFNSGVV 409


>Medtr6g027510.1 | transcription factor, putative | HC |
           chr6:9506956-9492623 | 20130731
          Length = 624

 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/229 (24%), Positives = 99/229 (43%), Gaps = 36/229 (15%)

Query: 6   SCIHCGKR-SFTRDDTTGELFCSSCSAV--------QPFDNFEAQIGGINGPVGTFIRVG 56
           +C HC +  S TR D  G+L C  C  V        +P   F+    G +   G  IR  
Sbjct: 3   NCDHCLRNVSGTRIDE-GQLCCEYCGKVLEECFLSNEP--TFQKGAAGQSKFSGNLIRAV 59

Query: 57  TAGAGSHYSYKDRKLFTANTTIEELTHRLGLGSKTVDVKSMISQIT--EGEFGMGHWFEV 114
              A S     DR    A   I  L   LG+   +V   ++   I   E  F  G   E+
Sbjct: 60  NEMADSRQRTTDR----ATENIRNLCRNLGMDDYSVADAAVKFYIIGLEKNFTRGRRSEL 115

Query: 115 LIGACAYVIMRKDDRPLPMAEVASAVDSDVYELGRMILRVIDFLGLKRPDFPEFDIVHSL 174
           +  AC Y+  R +D+P  + + ++A+ ++VY LG + L+++  L L+          H +
Sbjct: 116 VQAACLYLAFRDNDKPYLLIDFSNAIRTNVYALGSVFLQLLKVLRLEE---------HPI 166

Query: 175 ERTLKNSPSFADVEGWTLDRMRKQGVFLIQCAV-------KWYLSTGRR 216
            R L +   F  +  +T   ++++ V + + A+       + ++ TGR+
Sbjct: 167 ARKLVDPSLF--IFKFTHTLLKQRNVAVSESALNILSDMKRNWMQTGRK 213