Miyakogusa Predicted Gene

Lj6g3v1984420.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1984420.1 tr|B9GJ67|B9GJ67_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_753597 PE=4
SV=1,28.05,6e-18,seg,NULL,CUFF.60387.1
         (601 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g016640.1 | hypothetical protein | HC | chr2:5138562-51330...   414   e-115
Medtr1g071870.1 | NAD-dependent aldehyde dehydrogenase family pr...    66   8e-11

>Medtr2g016640.1 | hypothetical protein | HC | chr2:5138562-5133087
           | 20130731
          Length = 608

 Score =  414 bits (1065), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 272/533 (51%), Positives = 321/533 (60%), Gaps = 57/533 (10%)

Query: 45  MMNQSKQVASLTTSRLSPLAEPFTLNRXXXXXXXXXXXXXXXXXXXXXXXXXXXXECNMG 104
           MMNQS       TSRLSPLA+PFTLNR                            + +  
Sbjct: 1   MMNQS-------TSRLSPLAKPFTLNRSSSPKPSSSSENHDDPFSSLLDSFR---QSSFS 50

Query: 105 SISKSHSVGDSV-IPTLPLEIAEEKSIFEQHPSLELPSYGEFNGPLFDVSLPANSPSVTG 163
           S  +S S+ D+V I TLP E  +E S FE+HP LEL   G+F   + + S          
Sbjct: 51  SKGRSVSLNDTVKISTLPAE-GDESSRFEEHPFLELHKNGDFEVDVLNWSH--------- 100

Query: 164 LGYGIQLQGVDFHQGLFGKGNDDAGTSVADSDAGKFQKGKHAVDELTPSLTMSEGILEKN 223
                           F   N       + SDA  FQK K ++D L+  L +S+GILE N
Sbjct: 101 ----------------FKVAN-------SASDASMFQKDKPSIDGLSSFLKVSDGILENN 137

Query: 224 TGIIVANDILSNSEGIVHTADEYSSFLISNCKVAPLKLSTTDMSSTKSTPQNHFSPILDD 283
           TG IV  DILSNSEG  H  DE SSFL ++ KV PLK+ST DMSS KS PQN FS  L D
Sbjct: 138 TGTIVGKDILSNSEGTKHAVDESSSFLKAHNKVVPLKIST-DMSSAKSNPQNLFSNNLGD 196

Query: 284 NDPDVDSPCWKGTAAFSLPPSEISGSLQIQHIKKEAEKHNILNPLAPQFFPGIGYIKDDF 343
           +D D DSPCWKGT   SL PSEIS S+Q  H++K  EKHN LNP APQFFPGIGY+KDDF
Sbjct: 197 SDTDADSPCWKGTTDLSLIPSEISQSVQFHHVEKPTEKHNTLNPKAPQFFPGIGYVKDDF 256

Query: 344 VPYNSSAHVATNFFSGEDIFMESIMVESPVELNKKIELQNSSNICGREKALNVLNDPKRN 403
           V  NSS  V TN  SGEDI M+++M ES V+ N   E Q S+NI G E A N++NDP+  
Sbjct: 257 VSSNSSVPVTTNLLSGEDILMKTVMEESLVDFNMG-EFQYSTNISGTEMAFNMINDPRSI 315

Query: 404 LVDSVL-----MTQSSSKEECLTSKGKHGTVVDVDDFVKGNKNSKASRSMGGVFPAEGHS 458
            VD +L     MTQSSS E   TSKGK  T+ DV  FVKG +N  ASRS   VFPA+G S
Sbjct: 316 SVDPLLNSHSMMTQSSSIEA--TSKGKLVTIGDVGGFVKGTENPSASRSANEVFPAKGRS 373

Query: 459 PTLPASSSKVNIVTDLFKTFEGVSKSLIESQKPDIKIILRAMHVLSELLVH--VDGTESY 516
           PT P SSS+ N+ TDL K FEG SKSLIES KP+IK+++ AMHVLSELL    VDG  SY
Sbjct: 374 PTSPTSSSQANVFTDLLKRFEGFSKSLIESPKPNIKVMVGAMHVLSELLAKTCVDGVGSY 433

Query: 517 DEHDPDVIMIPQIINNLNGFSTKKCGQRI--STLDSTPADSTFCPDRLLELPK 567
            EHD     I QIINNLN F+ K  G+RI  STLDSTPA+S FC DR +++ K
Sbjct: 434 CEHDLSTTTILQIINNLNDFNAKVGGERISTSTLDSTPANSPFCLDRSVKVTK 486


>Medtr1g071870.1 | NAD-dependent aldehyde dehydrogenase family
           protein | LC | chr1:31913646-31915358 | 20130731
          Length = 457

 Score = 66.2 bits (160), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 48/99 (48%), Gaps = 25/99 (25%)

Query: 203 KHAVDELTPSLTMSEGILEKNTGIIVANDILSNSEGIVHTADEYSSFLISNCKVAPLKLS 262
           KH VD L P L MS+G+ E N   +  N                        KV PLK+S
Sbjct: 66  KHVVDGLNPFLKMSDGLFENNNHTMARN------------------------KVVPLKVS 101

Query: 263 TTDMSSTKSTPQNHFSPILDDNDPDVDSPCWKGTAAFSL 301
            TDMSS KSTP+  FS    ++D DVDSPCWK T   + 
Sbjct: 102 -TDMSSAKSTPKELFSNNFGESDTDVDSPCWKATTTLNF 139