Miyakogusa Predicted Gene
- Lj6g3v1984360.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1984360.1 Non Characterized Hit- tr|B9SHK0|B9SHK0_RICCO
Pentatricopeptide repeat-containing protein, putative
,34.64,1e-18,PPR,Pentatricopeptide repeat; PPR_3,Pentatricopeptide
repeat; seg,NULL; PPR: pentatricopeptide repea,CUFF.60386.1
(328 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g016740.1 | PPR containing plant-like protein | HC | chr2:... 264 1e-70
Medtr7g085100.1 | PPR containing plant-like protein | HC | chr7:... 97 2e-20
Medtr3g088505.3 | PPR containing plant-like protein | HC | chr3:... 92 6e-19
Medtr3g088505.1 | PPR containing plant-like protein | HC | chr3:... 92 6e-19
Medtr3g088505.2 | PPR containing plant-like protein | HC | chr3:... 92 6e-19
Medtr3g088505.4 | PPR containing plant-like protein | HC | chr3:... 92 6e-19
Medtr1g056160.3 | PPR containing plant protein | HC | chr1:24576... 82 1e-15
Medtr1g056160.8 | PPR containing plant protein | HC | chr1:24576... 82 1e-15
Medtr1g056160.5 | PPR containing plant protein | HC | chr1:24576... 82 1e-15
Medtr1g056160.4 | PPR containing plant protein | HC | chr1:24576... 82 1e-15
Medtr1g056160.6 | PPR containing plant protein | HC | chr1:24576... 82 1e-15
Medtr1g056160.7 | PPR containing plant protein | HC | chr1:24576... 82 1e-15
Medtr1g056160.2 | PPR containing plant protein | HC | chr1:24576... 82 1e-15
Medtr1g056160.1 | PPR containing plant protein | HC | chr1:24577... 81 1e-15
Medtr7g029515.1 | PPR containing plant protein | HC | chr7:10579... 80 3e-15
Medtr5g006640.1 | PPR containing plant-like protein | HC | chr5:... 80 3e-15
Medtr1g108270.1 | PPR containing plant-like protein | HC | chr1:... 79 6e-15
Medtr6g075180.1 | PPR containing plant-like protein | HC | chr6:... 75 6e-14
Medtr2g060630.1 | PPR containing plant-like protein | HC | chr2:... 74 1e-13
Medtr5g044120.1 | PPR containing plant-like protein | HC | chr5:... 72 9e-13
Medtr8g071300.1 | PPR containing plant-like protein | HC | chr8:... 71 1e-12
Medtr8g102710.1 | PPR containing plant-like protein | HC | chr8:... 67 2e-11
Medtr8g072150.1 | PPR containing plant-like protein | HC | chr8:... 67 3e-11
Medtr1g055295.1 | PPR containing plant-like protein | HC | chr1:... 64 3e-10
Medtr5g095130.1 | PPR containing plant-like protein | HC | chr5:... 62 6e-10
Medtr6g045263.2 | PPR containing plant-like protein | HC | chr6:... 62 9e-10
Medtr6g045263.1 | PPR containing plant-like protein | HC | chr6:... 62 1e-09
Medtr3g045420.1 | PPR containing plant-like protein | HC | chr3:... 60 2e-09
Medtr4g104830.1 | PPR containing plant protein | LC | chr4:43434... 60 3e-09
Medtr4g104790.1 | PPR containing plant protein | LC | chr4:43421... 60 3e-09
Medtr4g104800.1 | PPR containing plant protein | LC | chr4:43426... 58 1e-08
Medtr3g067670.1 | PPR containing plant-like protein | HC | chr3:... 57 2e-08
Medtr3g067670.2 | PPR containing plant-like protein | HC | chr3:... 57 2e-08
Medtr7g075210.1 | PPR superfamily protein | LC | chr7:28087993-2... 57 2e-08
Medtr7g082160.1 | PPR containing plant-like protein | HC | chr7:... 53 4e-07
Medtr5g088490.2 | PPR containing plant-like protein | LC | chr5:... 52 6e-07
Medtr5g088490.1 | PPR containing plant-like protein | LC | chr5:... 52 6e-07
Medtr1g086500.1 | PPR containing plant-like protein | HC | chr1:... 52 8e-07
Medtr1g100593.1 | PPR containing plant-like protein | HC | chr1:... 51 2e-06
Medtr1g100593.2 | PPR containing plant-like protein | HC | chr1:... 51 2e-06
Medtr1g011520.1 | PPR containing plant-like protein | HC | chr1:... 50 3e-06
Medtr3g114700.1 | PPR containing plant-like protein | HC | chr3:... 49 5e-06
>Medtr2g016740.1 | PPR containing plant-like protein | HC |
chr2:5175787-5177502 | 20130731
Length = 489
Score = 264 bits (674), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 129/152 (84%), Positives = 137/152 (90%)
Query: 163 PDEVDRVCKVIDELFALDRNMEAVLDECGVKLSHDLVVDVLQRFKHARKPAFRFFCWAGQ 222
P+EVDRVCKVI ELF LDRNMEAVLDECGV LSHDLVVDVL RFKHARKPAFRFFCW G+
Sbjct: 15 PNEVDRVCKVIHELFDLDRNMEAVLDECGVVLSHDLVVDVLHRFKHARKPAFRFFCWVGK 74
Query: 223 RPGFAHDSRTYNSMMGILGKTRQFETMVAMLEEMGEKGLLTMETFSIAIKAFALAKERKK 282
R F HDSRTYN+MM ILGKTRQFETMVA+LEEMGEKG LTM+TFSIAIKAFA AKERKK
Sbjct: 75 RRDFEHDSRTYNTMMDILGKTRQFETMVALLEEMGEKGFLTMDTFSIAIKAFASAKERKK 134
Query: 283 AVGIFDLMKKHKFKVGVDAVNFLLGSLVAAKL 314
AVG+FDLMKK+KFKVGV +VNFLL SL A KL
Sbjct: 135 AVGVFDLMKKYKFKVGVHSVNFLLDSLGATKL 166
>Medtr7g085100.1 | PPR containing plant-like protein | HC |
chr7:32903829-32906178 | 20130731
Length = 585
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 81/131 (61%), Gaps = 4/131 (3%)
Query: 187 LDECGVKLSHDLVVDVLQRFKHARKPAFRFFCWAGQRPGFAHDSRTYNSMMGILGKTRQF 246
L++C VK S +LVV+VL R ++ + AF FF WAG++PG+ H R Y+SM+ +LGK R+F
Sbjct: 122 LEDCNVKASSELVVEVLSRVRNDWEAAFTFFLWAGKQPGYDHSVREYHSMISVLGKMRRF 181
Query: 247 ETMVAMLEEM--GEKG--LLTMETFSIAIKAFALAKERKKAVGIFDLMKKHKFKVGVDAV 302
+T A++EEM G+ G ++T +T I I+ + + +A+ F K+ F+VG+
Sbjct: 182 DTAWALVEEMRRGKTGESIVTPQTLLIMIRKYCAVHDVGRAINTFYAFKRFNFQVGLYEF 241
Query: 303 NFLLGSLVAAK 313
LL +L K
Sbjct: 242 QGLLSALCRYK 252
>Medtr3g088505.3 | PPR containing plant-like protein | HC |
chr3:40228600-40232128 | 20130731
Length = 480
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 82/131 (62%)
Query: 183 MEAVLDECGVKLSHDLVVDVLQRFKHARKPAFRFFCWAGQRPGFAHDSRTYNSMMGILGK 242
++ L++ GV++S +LV VL+RF++A AFRFF WA ++ ++H R Y+ M+ L K
Sbjct: 50 LDTALNQSGVRVSPELVETVLKRFENAGMSAFRFFEWAEKQRNYSHSIRAYHLMIESLAK 109
Query: 243 TRQFETMVAMLEEMGEKGLLTMETFSIAIKAFALAKERKKAVGIFDLMKKHKFKVGVDAV 302
RQ++ M ++ M +KG++ +ETF I ++ +A A + +AV F++M K+ + A
Sbjct: 110 IRQYQIMWELVNSMRKKGMVNVETFCIIMRKYARAHKVDEAVYTFNVMDKYDTPQNLAAF 169
Query: 303 NFLLGSLVAAK 313
N LL +L ++
Sbjct: 170 NGLLSALCKSR 180
>Medtr3g088505.1 | PPR containing plant-like protein | HC |
chr3:40228600-40232138 | 20130731
Length = 480
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 82/131 (62%)
Query: 183 MEAVLDECGVKLSHDLVVDVLQRFKHARKPAFRFFCWAGQRPGFAHDSRTYNSMMGILGK 242
++ L++ GV++S +LV VL+RF++A AFRFF WA ++ ++H R Y+ M+ L K
Sbjct: 50 LDTALNQSGVRVSPELVETVLKRFENAGMSAFRFFEWAEKQRNYSHSIRAYHLMIESLAK 109
Query: 243 TRQFETMVAMLEEMGEKGLLTMETFSIAIKAFALAKERKKAVGIFDLMKKHKFKVGVDAV 302
RQ++ M ++ M +KG++ +ETF I ++ +A A + +AV F++M K+ + A
Sbjct: 110 IRQYQIMWELVNSMRKKGMVNVETFCIIMRKYARAHKVDEAVYTFNVMDKYDTPQNLAAF 169
Query: 303 NFLLGSLVAAK 313
N LL +L ++
Sbjct: 170 NGLLSALCKSR 180
>Medtr3g088505.2 | PPR containing plant-like protein | HC |
chr3:40228600-40232140 | 20130731
Length = 480
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 82/131 (62%)
Query: 183 MEAVLDECGVKLSHDLVVDVLQRFKHARKPAFRFFCWAGQRPGFAHDSRTYNSMMGILGK 242
++ L++ GV++S +LV VL+RF++A AFRFF WA ++ ++H R Y+ M+ L K
Sbjct: 50 LDTALNQSGVRVSPELVETVLKRFENAGMSAFRFFEWAEKQRNYSHSIRAYHLMIESLAK 109
Query: 243 TRQFETMVAMLEEMGEKGLLTMETFSIAIKAFALAKERKKAVGIFDLMKKHKFKVGVDAV 302
RQ++ M ++ M +KG++ +ETF I ++ +A A + +AV F++M K+ + A
Sbjct: 110 IRQYQIMWELVNSMRKKGMVNVETFCIIMRKYARAHKVDEAVYTFNVMDKYDTPQNLAAF 169
Query: 303 NFLLGSLVAAK 313
N LL +L ++
Sbjct: 170 NGLLSALCKSR 180
>Medtr3g088505.4 | PPR containing plant-like protein | HC |
chr3:40228600-40233968 | 20130731
Length = 480
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 82/131 (62%)
Query: 183 MEAVLDECGVKLSHDLVVDVLQRFKHARKPAFRFFCWAGQRPGFAHDSRTYNSMMGILGK 242
++ L++ GV++S +LV VL+RF++A AFRFF WA ++ ++H R Y+ M+ L K
Sbjct: 50 LDTALNQSGVRVSPELVETVLKRFENAGMSAFRFFEWAEKQRNYSHSIRAYHLMIESLAK 109
Query: 243 TRQFETMVAMLEEMGEKGLLTMETFSIAIKAFALAKERKKAVGIFDLMKKHKFKVGVDAV 302
RQ++ M ++ M +KG++ +ETF I ++ +A A + +AV F++M K+ + A
Sbjct: 110 IRQYQIMWELVNSMRKKGMVNVETFCIIMRKYARAHKVDEAVYTFNVMDKYDTPQNLAAF 169
Query: 303 NFLLGSLVAAK 313
N LL +L ++
Sbjct: 170 NGLLSALCKSR 180
>Medtr1g056160.3 | PPR containing plant protein | HC |
chr1:24576326-24582031 | 20130731
Length = 501
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 70/123 (56%)
Query: 191 GVKLSHDLVVDVLQRFKHARKPAFRFFCWAGQRPGFAHDSRTYNSMMGILGKTRQFETMV 250
G+ LS +L+ +L R+K K A F WAG F H ++Y+ M+ ILG+ + + M
Sbjct: 81 GIHLSENLINRLLFRYKDDWKSALAIFRWAGSHSNFKHSQQSYDMMVDILGRMKAMDKMR 140
Query: 251 AMLEEMGEKGLLTMETFSIAIKAFALAKERKKAVGIFDLMKKHKFKVGVDAVNFLLGSLV 310
+LEEM ++ L+T+ T + ++ F A++ K AV IFD ++ + +++N LL +L
Sbjct: 141 EILEEMRQESLITLNTIAKVMRRFVGARQWKDAVRIFDDLQFLGLEKNTESMNVLLDTLC 200
Query: 311 AAK 313
K
Sbjct: 201 KEK 203
>Medtr1g056160.8 | PPR containing plant protein | HC |
chr1:24576341-24582031 | 20130731
Length = 501
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 70/123 (56%)
Query: 191 GVKLSHDLVVDVLQRFKHARKPAFRFFCWAGQRPGFAHDSRTYNSMMGILGKTRQFETMV 250
G+ LS +L+ +L R+K K A F WAG F H ++Y+ M+ ILG+ + + M
Sbjct: 81 GIHLSENLINRLLFRYKDDWKSALAIFRWAGSHSNFKHSQQSYDMMVDILGRMKAMDKMR 140
Query: 251 AMLEEMGEKGLLTMETFSIAIKAFALAKERKKAVGIFDLMKKHKFKVGVDAVNFLLGSLV 310
+LEEM ++ L+T+ T + ++ F A++ K AV IFD ++ + +++N LL +L
Sbjct: 141 EILEEMRQESLITLNTIAKVMRRFVGARQWKDAVRIFDDLQFLGLEKNTESMNVLLDTLC 200
Query: 311 AAK 313
K
Sbjct: 201 KEK 203
>Medtr1g056160.5 | PPR containing plant protein | HC |
chr1:24576341-24581268 | 20130731
Length = 501
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 70/123 (56%)
Query: 191 GVKLSHDLVVDVLQRFKHARKPAFRFFCWAGQRPGFAHDSRTYNSMMGILGKTRQFETMV 250
G+ LS +L+ +L R+K K A F WAG F H ++Y+ M+ ILG+ + + M
Sbjct: 81 GIHLSENLINRLLFRYKDDWKSALAIFRWAGSHSNFKHSQQSYDMMVDILGRMKAMDKMR 140
Query: 251 AMLEEMGEKGLLTMETFSIAIKAFALAKERKKAVGIFDLMKKHKFKVGVDAVNFLLGSLV 310
+LEEM ++ L+T+ T + ++ F A++ K AV IFD ++ + +++N LL +L
Sbjct: 141 EILEEMRQESLITLNTIAKVMRRFVGARQWKDAVRIFDDLQFLGLEKNTESMNVLLDTLC 200
Query: 311 AAK 313
K
Sbjct: 201 KEK 203
>Medtr1g056160.4 | PPR containing plant protein | HC |
chr1:24576341-24581268 | 20130731
Length = 501
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 70/123 (56%)
Query: 191 GVKLSHDLVVDVLQRFKHARKPAFRFFCWAGQRPGFAHDSRTYNSMMGILGKTRQFETMV 250
G+ LS +L+ +L R+K K A F WAG F H ++Y+ M+ ILG+ + + M
Sbjct: 81 GIHLSENLINRLLFRYKDDWKSALAIFRWAGSHSNFKHSQQSYDMMVDILGRMKAMDKMR 140
Query: 251 AMLEEMGEKGLLTMETFSIAIKAFALAKERKKAVGIFDLMKKHKFKVGVDAVNFLLGSLV 310
+LEEM ++ L+T+ T + ++ F A++ K AV IFD ++ + +++N LL +L
Sbjct: 141 EILEEMRQESLITLNTIAKVMRRFVGARQWKDAVRIFDDLQFLGLEKNTESMNVLLDTLC 200
Query: 311 AAK 313
K
Sbjct: 201 KEK 203
>Medtr1g056160.6 | PPR containing plant protein | HC |
chr1:24576326-24581268 | 20130731
Length = 501
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 70/123 (56%)
Query: 191 GVKLSHDLVVDVLQRFKHARKPAFRFFCWAGQRPGFAHDSRTYNSMMGILGKTRQFETMV 250
G+ LS +L+ +L R+K K A F WAG F H ++Y+ M+ ILG+ + + M
Sbjct: 81 GIHLSENLINRLLFRYKDDWKSALAIFRWAGSHSNFKHSQQSYDMMVDILGRMKAMDKMR 140
Query: 251 AMLEEMGEKGLLTMETFSIAIKAFALAKERKKAVGIFDLMKKHKFKVGVDAVNFLLGSLV 310
+LEEM ++ L+T+ T + ++ F A++ K AV IFD ++ + +++N LL +L
Sbjct: 141 EILEEMRQESLITLNTIAKVMRRFVGARQWKDAVRIFDDLQFLGLEKNTESMNVLLDTLC 200
Query: 311 AAK 313
K
Sbjct: 201 KEK 203
>Medtr1g056160.7 | PPR containing plant protein | HC |
chr1:24576340-24582031 | 20130731
Length = 501
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 70/123 (56%)
Query: 191 GVKLSHDLVVDVLQRFKHARKPAFRFFCWAGQRPGFAHDSRTYNSMMGILGKTRQFETMV 250
G+ LS +L+ +L R+K K A F WAG F H ++Y+ M+ ILG+ + + M
Sbjct: 81 GIHLSENLINRLLFRYKDDWKSALAIFRWAGSHSNFKHSQQSYDMMVDILGRMKAMDKMR 140
Query: 251 AMLEEMGEKGLLTMETFSIAIKAFALAKERKKAVGIFDLMKKHKFKVGVDAVNFLLGSLV 310
+LEEM ++ L+T+ T + ++ F A++ K AV IFD ++ + +++N LL +L
Sbjct: 141 EILEEMRQESLITLNTIAKVMRRFVGARQWKDAVRIFDDLQFLGLEKNTESMNVLLDTLC 200
Query: 311 AAK 313
K
Sbjct: 201 KEK 203
>Medtr1g056160.2 | PPR containing plant protein | HC |
chr1:24576341-24582024 | 20130731
Length = 501
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 70/123 (56%)
Query: 191 GVKLSHDLVVDVLQRFKHARKPAFRFFCWAGQRPGFAHDSRTYNSMMGILGKTRQFETMV 250
G+ LS +L+ +L R+K K A F WAG F H ++Y+ M+ ILG+ + + M
Sbjct: 81 GIHLSENLINRLLFRYKDDWKSALAIFRWAGSHSNFKHSQQSYDMMVDILGRMKAMDKMR 140
Query: 251 AMLEEMGEKGLLTMETFSIAIKAFALAKERKKAVGIFDLMKKHKFKVGVDAVNFLLGSLV 310
+LEEM ++ L+T+ T + ++ F A++ K AV IFD ++ + +++N LL +L
Sbjct: 141 EILEEMRQESLITLNTIAKVMRRFVGARQWKDAVRIFDDLQFLGLEKNTESMNVLLDTLC 200
Query: 311 AAK 313
K
Sbjct: 201 KEK 203
>Medtr1g056160.1 | PPR containing plant protein | HC |
chr1:24577487-24578941 | 20130731
Length = 484
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 70/123 (56%)
Query: 191 GVKLSHDLVVDVLQRFKHARKPAFRFFCWAGQRPGFAHDSRTYNSMMGILGKTRQFETMV 250
G+ LS +L+ +L R+K K A F WAG F H ++Y+ M+ ILG+ + + M
Sbjct: 64 GIHLSENLINRLLFRYKDDWKSALAIFRWAGSHSNFKHSQQSYDMMVDILGRMKAMDKMR 123
Query: 251 AMLEEMGEKGLLTMETFSIAIKAFALAKERKKAVGIFDLMKKHKFKVGVDAVNFLLGSLV 310
+LEEM ++ L+T+ T + ++ F A++ K AV IFD ++ + +++N LL +L
Sbjct: 124 EILEEMRQESLITLNTIAKVMRRFVGARQWKDAVRIFDDLQFLGLEKNTESMNVLLDTLC 183
Query: 311 AAK 313
K
Sbjct: 184 KEK 186
>Medtr7g029515.1 | PPR containing plant protein | HC |
chr7:10579080-10580534 | 20130731
Length = 484
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 70/123 (56%)
Query: 191 GVKLSHDLVVDVLQRFKHARKPAFRFFCWAGQRPGFAHDSRTYNSMMGILGKTRQFETMV 250
G+ LS +L+ +L R+K K A F WA F H ++Y+ M+ ILG+ + + M
Sbjct: 64 GIHLSENLINRLLFRYKDDWKSALAIFRWASSHSNFKHSQQSYDMMVDILGRMKAMDKMR 123
Query: 251 AMLEEMGEKGLLTMETFSIAIKAFALAKERKKAVGIFDLMKKHKFKVGVDAVNFLLGSLV 310
+LEEM ++ L+T++T + ++ F A++ K AV IFD ++ + +++N LL +L
Sbjct: 124 EILEEMRQESLITLDTIAKVMRRFVGARQWKDAVRIFDDLQFLGLEKNTESMNVLLDTLC 183
Query: 311 AAK 313
K
Sbjct: 184 KEK 186
>Medtr5g006640.1 | PPR containing plant-like protein | HC |
chr5:1017001-1018791 | 20130731
Length = 553
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 74/128 (57%), Gaps = 1/128 (0%)
Query: 187 LDECGVKLSHDLVVDVLQRFKHARKPAFRFFCWAGQRPGFAHDSRTYNSMMGILGKTRQF 246
LD G ++S+ LV+ VL+RF + A+ FF WA ++ + H YN M+ ILGK ++F
Sbjct: 125 LDGSGFRVSNSLVMQVLKRFGNDWVAAYGFFIWAKKQTPYVHSPEVYNLMVDILGKAKEF 184
Query: 247 ETMVAMLEEMGE-KGLLTMETFSIAIKAFALAKERKKAVGIFDLMKKHKFKVGVDAVNFL 305
+ M +++EM +G + ++T S ++ FA A+ + AV F M K+ + A+N L
Sbjct: 185 DLMWKLVKEMKRIEGYVCLDTMSKVMRRFAKAQRHEDAVEAFRGMGKYGVEKDTAALNKL 244
Query: 306 LGSLVAAK 313
L +LV +
Sbjct: 245 LDALVKGQ 252
>Medtr1g108270.1 | PPR containing plant-like protein | HC |
chr1:48926827-48924799 | 20130731
Length = 509
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 76/126 (60%)
Query: 192 VKLSHDLVVDVLQRFKHARKPAFRFFCWAGQRPGFAHDSRTYNSMMGILGKTRQFETMVA 251
V++S +LVV VL + +A A FF WA ++ GF H++ +++++ LGK RQF+ +
Sbjct: 84 VEVSPELVVAVLNKLSNAGILALSFFRWAEKQQGFNHNTEIFHALIEALGKIRQFKMIWN 143
Query: 252 MLEEMGEKGLLTMETFSIAIKAFALAKERKKAVGIFDLMKKHKFKVGVDAVNFLLGSLVA 311
+++EM ++ LL +TFS+ + + AK K+A+ F+ M+K+ K + N L+ L
Sbjct: 144 LVDEMKQRKLLNGDTFSLIARRYVRAKVIKEALKTFERMEKYGLKPQISDFNKLIDVLCK 203
Query: 312 AKLGLK 317
+K ++
Sbjct: 204 SKFHVE 209
>Medtr6g075180.1 | PPR containing plant-like protein | HC |
chr6:27846701-27844575 | 20130731
Length = 524
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 78/156 (50%), Gaps = 16/156 (10%)
Query: 165 EVDRV-CKVIDELFALDRNMEAVLDECGVKLSHDLVVDVLQRFKHARKPAFRFFCWAGQR 223
+VD+V +D L RNME L+ GV L+ LV VL R ++ K AFRFF WAG +
Sbjct: 49 DVDKVYTTTMDNLLGF-RNMEKALENLGVPLTTPLVTGVLHRLRYDEKIAFRFFTWAGHQ 107
Query: 224 PGFAHDSRTYNSMMGILGKTR----QFETMVAMLEEM--GEKGLLTMETFSIAIKAFALA 277
++H++ YN MM IL TR QF + +LE M K + ++ ++ +
Sbjct: 108 DNYSHEACVYNDMMDILSSTRYKVKQFRIVCDVLEYMKRNNKSTVPVDVLMDILRKYT-- 165
Query: 278 KERKKAVGIFDLMKKHKFKVG----VDAVNFLLGSL 309
K + K+ + +V ++A NFLL +L
Sbjct: 166 --EKYLTHVQKFAKRKRIRVKTQPEINAFNFLLDAL 199
>Medtr2g060630.1 | PPR containing plant-like protein | HC |
chr2:25711944-25710341 | 20130731
Length = 497
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 61/106 (57%), Gaps = 1/106 (0%)
Query: 183 MEAVLDECGVKLSHDLVVDVLQRFKHARKPAFRFFCWAGQRPGFAHDSRTYNSMMGILGK 242
+E L+ G+ +++LV+ VLQR + KPAF FF W + + YN ++ ILGK
Sbjct: 84 IEQALNLIGIHPNNNLVLQVLQRHRSDWKPAFIFFKWVSKTNNYTPSCEVYNEIINILGK 143
Query: 243 TRQFETMVAMLEEMGE-KGLLTMETFSIAIKAFALAKERKKAVGIF 287
+ FE + +L+EM + K + ETF I I+ F A + ++A+ IF
Sbjct: 144 MKCFEELHQVLDEMSQRKEFINEETFCILIRRFVAAHKLEEAINIF 189
>Medtr5g044120.1 | PPR containing plant-like protein | HC |
chr5:19397442-19395735 | 20130731
Length = 507
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 79/157 (50%), Gaps = 3/157 (1%)
Query: 161 ADPDEVDRVCKVI-DELFALDRNMEAVLDECGVKLSHDLVVDVLQRFKHARKPAFRFFCW 219
+ +E+ +VC ++ + + D + + L L+H+ + V F ++ +P +RFF +
Sbjct: 32 VNREELLKVCTILYQQQNSPDSRLHSKLTSSNFNLTHEFFLQVCNNFPYSWRPVYRFFLF 91
Query: 220 AGQRPG--FAHDSRTYNSMMGILGKTRQFETMVAMLEEMGEKGLLTMETFSIAIKAFALA 277
Q F H ++N M+ ++ K+R + +++ E +GL+ +TF I +K A
Sbjct: 92 TQQEKNSSFTHTHVSFNKMLDVVAKSRNIDLFWSLVNETARRGLVNNKTFVIGLKTLGGA 151
Query: 278 KERKKAVGIFDLMKKHKFKVGVDAVNFLLGSLVAAKL 314
+E KK V F LM + + V+ +N ++ + KL
Sbjct: 152 RELKKCVEFFHLMNLNGYGYSVERLNKVVEEMCKVKL 188
>Medtr8g071300.1 | PPR containing plant-like protein | HC |
chr8:30270840-30266726 | 20130731
Length = 647
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 77/150 (51%), Gaps = 6/150 (4%)
Query: 165 EVDRVCKVIDELFALDRNMEAVLDECGVKLSHDLVVDVLQRFKHARKPAFRFFCWAGQRP 224
+V+++ +++ + + +E L E GV + L VL R A A+RFF WA ++
Sbjct: 83 DVEKIYRILRKYHSRVPKLELALKESGVVVRSGLTERVLNRCGDAGNLAYRFFSWASKQT 142
Query: 225 GFAHDSRTYNSMMGILGKTRQFETMVAMLEEM--GEKGLLTMETFSIAIKAFALAKERKK 282
+ H Y +M+ +L K RQF + +++EM L++ + F I ++ FA A+ K
Sbjct: 143 SYRHSQEVYKAMIKVLSKMRQFGAVWGLIDEMRVENSELISPQVFVILMRRFASARMVSK 202
Query: 283 AVGIFDLMKKHKFKVGVDAVNFLLGSLVAA 312
A+ + D M K+ G + ++ G L+ A
Sbjct: 203 AIEVLDEMPKY----GCEVDEYVFGCLLDA 228
>Medtr8g102710.1 | PPR containing plant-like protein | HC |
chr8:43240632-43242952 | 20130731
Length = 520
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 75/154 (48%), Gaps = 3/154 (1%)
Query: 163 PDEVDRVCKVIDELFALDRNMEAVLDECGVKLSHDLVVDVLQRFKHARKPAFRFFCWAGQ 222
P+ V+ + +++ + ++E L ++S DLV VL+R H A RFF WA
Sbjct: 40 PELVNEISRIVSDHRHPRHDLELSLTPFSTQISTDLVEQVLKRCNHLGFSAHRFFLWAKS 99
Query: 223 RPGFAHDSRTYNSMMGILGKTRQFETMVAMLEEMGEKGL---LTMETFSIAIKAFALAKE 279
PGF H ++++ ++ ILG+++QF + L E E +T E F I A++ A
Sbjct: 100 IPGFQHSVQSFHILVEILGRSKQFAILWDFLIETRESDSSCKITNEIFWIIFTAYSRADL 159
Query: 280 RKKAVGIFDLMKKHKFKVGVDAVNFLLGSLVAAK 313
A+ F M + K + V+ LL +L K
Sbjct: 160 PDGAIRSFVRMDEFGIKPSIIDVDLLLYTLCKKK 193
>Medtr8g072150.1 | PPR containing plant-like protein | HC |
chr8:30459094-30456922 | 20130731
Length = 506
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 70/129 (54%), Gaps = 2/129 (1%)
Query: 181 RNMEAVLDECGVKLSHDLVVDVLQRFKHARKPAFRFFCWAGQRPGFAHDSRTYNSMMGIL 240
++++ L G+ S + V +VL+ + A +FF WAG+ H + +N M+ +L
Sbjct: 67 QDIDNALSSSGIHPSEECVHEVLKLSYNYPSSAIKFFRWAGRLR--KHSAHAWNLMVDLL 124
Query: 241 GKTRQFETMVAMLEEMGEKGLLTMETFSIAIKAFALAKERKKAVGIFDLMKKHKFKVGVD 300
G+ + FE M + M ++G+L++ TF +++ +A +AV FD+M K+ V
Sbjct: 125 GRNQLFEPMWDAVRTMKQEGVLSLPTFVSVFQSYCMAGRVNEAVMSFDVMDKYDIDKNVV 184
Query: 301 AVNFLLGSL 309
AVN LL ++
Sbjct: 185 AVNSLLSAI 193
>Medtr1g055295.1 | PPR containing plant-like protein | HC |
chr1:24439721-24443062 | 20130731
Length = 1046
Score = 63.5 bits (153), Expect = 3e-10, Method: Composition-based stats.
Identities = 38/151 (25%), Positives = 75/151 (49%), Gaps = 4/151 (2%)
Query: 165 EVDRVCKVIDELFALD-RNMEAVLDECGVKLSHDLVVDVLQRFKHARKPAFRFFCWAGQR 223
+V VC+++ +LD +++ L+ ++ + + V++++Q FF W G+R
Sbjct: 629 DVRDVCRILSS--SLDWSSIQEKLEISNIEFTPEFVMEIMQSCSMHGCTVLNFFSWVGKR 686
Query: 224 PGFAHDSRTYNSMMGILGKTRQFETMVAMLEEMGEKG-LLTMETFSIAIKAFALAKERKK 282
PG+ H + +YN + I G+ + F+ M ++L EM L+T ET++I I + +
Sbjct: 687 PGYRHTTESYNIAIKIAGRGKDFKHMRSLLYEMRRNNYLITSETWTIMIMIYGRTGLTEM 746
Query: 283 AVGIFDLMKKHKFKVGVDAVNFLLGSLVAAK 313
A+ F MK + +L+ +L K
Sbjct: 747 AMNCFKEMKDGGYSPSRSTYKYLIIALCGRK 777
Score = 52.8 bits (125), Expect = 4e-07, Method: Composition-based stats.
Identities = 34/132 (25%), Positives = 73/132 (55%), Gaps = 8/132 (6%)
Query: 169 VCKVIDELFALDR------NMEAVLDECG-VKLSHDLVVDVLQRFKHARKPAFRFFCWAG 221
+C+++ E+ + R +ME L++ G +L+ ++ VL+R R F W
Sbjct: 133 MCRMVGEIMEIIRGENGSVSMEERLEKMGYCELNVEVFDRVLKRCFKMPHLGLRVFNWLK 192
Query: 222 QRPGFAHDSRTYNSMMGILGKTRQFETMVAMLEEMGE-KGLLTMETFSIAIKAFALAKER 280
+ GF H ++TYN+M+ ++G+ ++F + +++EM E + + T++I + + AK+
Sbjct: 193 LKGGFRHTTQTYNTMLCLVGEGKEFGLVKKLVDEMDECRVQKDVNTWTILVSLYGKAKKI 252
Query: 281 KKAVGIFDLMKK 292
+A+ F+ M+K
Sbjct: 253 SEALLAFENMQK 264
>Medtr5g095130.1 | PPR containing plant-like protein | HC |
chr5:41578336-41574902 | 20130731
Length = 906
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 64/118 (54%), Gaps = 2/118 (1%)
Query: 197 DLVVDVLQRFKHARKPAFRFFCWAGQRPGFAHDSRTYNSMMGILGKTRQFETMVAMLEEM 256
+++V V++R K AF++F W ++ AH YN+ + ++ +TR + + +LEEM
Sbjct: 101 EVIVGVMKRLKDVN-VAFQYFRWVERKTQQAHCPEVYNAFLMVMARTRNLDYLEQILEEM 159
Query: 257 GEKGLLTMETFSIAIKA-FALAKERKKAVGIFDLMKKHKFKVGVDAVNFLLGSLVAAK 313
G S+ + A F + + K+A G+ ++M+K KF+ A L+G+L AA
Sbjct: 160 SVAGFGLSNHVSVELVASFVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAAN 217
>Medtr6g045263.2 | PPR containing plant-like protein | HC |
chr6:16192577-16189964 | 20130731
Length = 532
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 64/117 (54%), Gaps = 11/117 (9%)
Query: 166 VDRVCKVID-ELFALDRNMEAVLDECGVK----LSHDLVVDVLQRFKHARKP-----AFR 215
V+RV +V+ + LD + VLDE G++ L +++ VL+ K A++
Sbjct: 132 VERVLEVLRRDGLELDFDFRVVLDELGIRPTWILVREVLYAVLREVNCGNKATIGRLAYK 191
Query: 216 FFCWAGQRPGFAHDSRTYNSMMGILGKTRQFETMVAMLEEMGEKGL-LTMETFSIAI 271
FF W GQ+ G+ H +Y+ +M I + +F+ M +++EM EKG +T TF+I I
Sbjct: 192 FFVWCGQKEGYCHTVNSYHLIMQIFAECEEFKAMWRLVDEMIEKGFPVTARTFNILI 248
>Medtr6g045263.1 | PPR containing plant-like protein | HC |
chr6:16192167-16188301 | 20130731
Length = 508
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 64/117 (54%), Gaps = 11/117 (9%)
Query: 166 VDRVCKVID-ELFALDRNMEAVLDECGVK----LSHDLVVDVLQRFKHARKP-----AFR 215
V+RV +V+ + LD + VLDE G++ L +++ VL+ K A++
Sbjct: 108 VERVLEVLRRDGLELDFDFRVVLDELGIRPTWILVREVLYAVLREVNCGNKATIGRLAYK 167
Query: 216 FFCWAGQRPGFAHDSRTYNSMMGILGKTRQFETMVAMLEEMGEKGL-LTMETFSIAI 271
FF W GQ+ G+ H +Y+ +M I + +F+ M +++EM EKG +T TF+I I
Sbjct: 168 FFVWCGQKEGYCHTVNSYHLIMQIFAECEEFKAMWRLVDEMIEKGFPVTARTFNILI 224
>Medtr3g045420.1 | PPR containing plant-like protein | HC |
chr3:14773131-14777409 | 20130731
Length = 903
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 213 AFRFFCWAGQRPGFAHDSRTYNSMMGILGKTRQFETMVAMLEEMGEKGLL-TMETFSIAI 271
A FF W ++P F HD TY +M+GILG+ R+F + +LE+M + G + T++ I
Sbjct: 390 ALSFFYWLKRQPSFRHDGHTYTTMVGILGRAREFGAINNLLEQMVKDGCQPNVVTYNRLI 449
Query: 272 KAFALAKERKKAVGIFDLMKKHK 294
++ A K+A+ +F+ M++ +
Sbjct: 450 HSYGRANYLKEALNVFNQMQEKR 472
>Medtr4g104830.1 | PPR containing plant protein | LC |
chr4:43434609-43436827 | 20130731
Length = 638
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 69/134 (51%), Gaps = 1/134 (0%)
Query: 180 DRNMEAVLDECGVKLSHDLVVDVLQRFKHARKPAFRFFCWAGQRPGFAHDSRTYNSMMGI 239
D +E L++ ++LS + V+ V++ + + A++FF W G++ G+ ++ TYN++ +
Sbjct: 215 DDKVENELEKVKIQLSDNFVIRVMKELRDSPLKAYKFFHWVGKQSGYQQNTVTYNAVARV 274
Query: 240 LGKTRQFETMVAMLEEMGEKG-LLTMETFSIAIKAFALAKERKKAVGIFDLMKKHKFKVG 298
L + E +++EEM G L + T+ + K + AV +++ M +K
Sbjct: 275 LPRMESIEEFWSIIEEMKSVGHELDLNTYIKISRKLQKNKMMEDAVKLYEHMMDSSYKPS 334
Query: 299 VDAVNFLLGSLVAA 312
V LL S+ A+
Sbjct: 335 VLDCIMLLKSISAS 348
>Medtr4g104790.1 | PPR containing plant protein | LC |
chr4:43421559-43424066 | 20130731
Length = 628
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 68/145 (46%), Gaps = 3/145 (2%)
Query: 171 KVIDELFALDRNMEAV--LDECGVKLSHDLVVDVLQRFKHARKPAFRFFCWAGQRPGFAH 228
KV+ + + E V L E ++ S V+ VL+ + + FF W G++ G+ H
Sbjct: 202 KVVSVILGSEWGDEVVNELVELKIQFSDSFVIRVLKELRSCPLKGYNFFYWVGKQSGYQH 261
Query: 229 DSRTYNSMMGILGKTRQFETMVAMLEEMGEKGL-LTMETFSIAIKAFALAKERKKAVGIF 287
++ TYN++ +L + E ++L EM L ++T+ F + K AV ++
Sbjct: 262 NAVTYNAVARVLARMDSIEEFWSILAEMKSVNYELEIDTYMKITMQFVKNQMMKDAVKLY 321
Query: 288 DLMKKHKFKVGVDAVNFLLGSLVAA 312
+LM ++ V FLL ++ +
Sbjct: 322 ELMMDGSYEPSVHDCCFLLNAIATS 346
>Medtr4g104800.1 | PPR containing plant protein | LC |
chr4:43426065-43428441 | 20130731
Length = 637
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 68/131 (51%), Gaps = 1/131 (0%)
Query: 180 DRNMEAVLDECGVKLSHDLVVDVLQRFKHARKPAFRFFCWAGQRPGFAHDSRTYNSMMGI 239
D +E L++ ++LS + V+ V++ +++ A++FF W G++ G+ ++ TYN++ +
Sbjct: 218 DNEIENELEKVKIQLSDNFVIRVMKELRNSPLKAYKFFHWVGKQSGYLQNTVTYNAVARV 277
Query: 240 LGKTRQFETMVAMLEEMGEKG-LLTMETFSIAIKAFALAKERKKAVGIFDLMKKHKFKVG 298
L + E ++LEEM G L ++T+ + + + +V +++ M +K
Sbjct: 278 LPRMESIEKFWSILEEMKSVGHELDLDTYIKISRQLLNNRMMEDSVKLYEHMMDSSYKPT 337
Query: 299 VDAVNFLLGSL 309
LL SL
Sbjct: 338 APDCIVLLKSL 348
>Medtr3g067670.1 | PPR containing plant-like protein | HC |
chr3:30265173-30262608 | 20130731
Length = 478
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 66/137 (48%)
Query: 183 MEAVLDECGVKLSHDLVVDVLQRFKHARKPAFRFFCWAGQRPGFAHDSRTYNSMMGILGK 242
+E L++ + L+ V +VL+ + +FF WAG R H +N ++ ILGK
Sbjct: 49 VEKSLEDSQINLTPQDVENVLKLSYRFPAQSVKFFRWAGHRINHNHTPYAWNLVIDILGK 108
Query: 243 TRQFETMVAMLEEMGEKGLLTMETFSIAIKAFALAKERKKAVGIFDLMKKHKFKVGVDAV 302
F+ M ++ M +GLL+ TF+ ++ A A+ F++M + V ++
Sbjct: 109 NCLFDAMWDAVKSMRREGLLSRSTFASIFASYVNAGRLADAIMTFEVMDGYGVVRDVVSL 168
Query: 303 NFLLGSLVAAKLGLKTC 319
N LL ++ + ++ C
Sbjct: 169 NSLLSAVCGSGRSVEAC 185
>Medtr3g067670.2 | PPR containing plant-like protein | HC |
chr3:30265171-30262608 | 20130731
Length = 478
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 66/137 (48%)
Query: 183 MEAVLDECGVKLSHDLVVDVLQRFKHARKPAFRFFCWAGQRPGFAHDSRTYNSMMGILGK 242
+E L++ + L+ V +VL+ + +FF WAG R H +N ++ ILGK
Sbjct: 49 VEKSLEDSQINLTPQDVENVLKLSYRFPAQSVKFFRWAGHRINHNHTPYAWNLVIDILGK 108
Query: 243 TRQFETMVAMLEEMGEKGLLTMETFSIAIKAFALAKERKKAVGIFDLMKKHKFKVGVDAV 302
F+ M ++ M +GLL+ TF+ ++ A A+ F++M + V ++
Sbjct: 109 NCLFDAMWDAVKSMRREGLLSRSTFASIFASYVNAGRLADAIMTFEVMDGYGVVRDVVSL 168
Query: 303 NFLLGSLVAAKLGLKTC 319
N LL ++ + ++ C
Sbjct: 169 NSLLSAVCGSGRSVEAC 185
>Medtr7g075210.1 | PPR superfamily protein | LC |
chr7:28087993-28086890 | 20130731
Length = 280
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%)
Query: 183 MEAVLDECGVKLSHDLVVDVLQRFKHARKPAFRFFCWAGQRPGFAHDSRTYNSMMGILGK 242
+E L+ G+ +LV+++LQR + KPAF FF W + + YN ++ ILGK
Sbjct: 103 IERALNLTGIHPDSNLVLELLQRHRSDWKPAFIFFKWVTKTNNYTPSCEVYNEIINILGK 162
Query: 243 TRQFETMVAMLEEM 256
++FE + +L+EM
Sbjct: 163 MKRFEELHQVLDEM 176
>Medtr7g082160.1 | PPR containing plant-like protein | HC |
chr7:31475033-31473081 | 20130731
Length = 578
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 2/114 (1%)
Query: 180 DRNMEAVLDECGVKLSHDLVVDVLQRFKH-ARKPAFRFFCWAGQRPGFAHDSRTYNSMMG 238
D ++ VLD +L+ DLV+ VL + H R +FF WAG + F D M+
Sbjct: 84 DTAIDNVLDCYKAELTSDLVLRVLMSYNHLGRTKTLKFFSWAGTKMDFQFDDSVIEYMVD 143
Query: 239 ILGKTRQFETMVAMLEEM-GEKGLLTMETFSIAIKAFALAKERKKAVGIFDLMK 291
G+ + F+ + +L + KG ++ + SI I+ + + +FD M+
Sbjct: 144 FFGRRKLFDDIKCLLMTIVAHKGQVSSKALSICIRFLGREGRINEVLSLFDEME 197
>Medtr5g088490.2 | PPR containing plant-like protein | LC |
chr5:38409043-38411682 | 20130731
Length = 879
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 64/140 (45%), Gaps = 3/140 (2%)
Query: 173 IDELFALDRNMEAVLDECGVKLSHDLVVDVLQRFKHARK--PAFRFFCWAGQRPGFAHDS 230
I ++ + + N A L + ++ V+ VL P RFF W G +PGF H
Sbjct: 76 IYQILSSNDNFSASLTSLNLPITTSFVLRVLHYGADNNYILPCLRFFDWVGHQPGFYHTQ 135
Query: 231 RTYNSMMGILGKTRQFETMVAMLEEMGEKGLLTMETF-SIAIKAFALAKERKKAVGIFDL 289
T+ ++ IL + + ++ LE G++ F + + +A+A + + A+ +F
Sbjct: 136 ATFTAIFRILARAKLMPIVIEFLETFGKRVFDHKVCFIDLLVVGYAIAGKPEIALNVFGK 195
Query: 290 MKKHKFKVGVDAVNFLLGSL 309
M+ + + + LLG+L
Sbjct: 196 MRFQGLDLDIVGYHILLGAL 215
>Medtr5g088490.1 | PPR containing plant-like protein | LC |
chr5:38409043-38411682 | 20130731
Length = 879
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 64/140 (45%), Gaps = 3/140 (2%)
Query: 173 IDELFALDRNMEAVLDECGVKLSHDLVVDVLQRFKHARK--PAFRFFCWAGQRPGFAHDS 230
I ++ + + N A L + ++ V+ VL P RFF W G +PGF H
Sbjct: 76 IYQILSSNDNFSASLTSLNLPITTSFVLRVLHYGADNNYILPCLRFFDWVGHQPGFYHTQ 135
Query: 231 RTYNSMMGILGKTRQFETMVAMLEEMGEKGLLTMETF-SIAIKAFALAKERKKAVGIFDL 289
T+ ++ IL + + ++ LE G++ F + + +A+A + + A+ +F
Sbjct: 136 ATFTAIFRILARAKLMPIVIEFLETFGKRVFDHKVCFIDLLVVGYAIAGKPEIALNVFGK 195
Query: 290 MKKHKFKVGVDAVNFLLGSL 309
M+ + + + LLG+L
Sbjct: 196 MRFQGLDLDIVGYHILLGAL 215
>Medtr1g086500.1 | PPR containing plant-like protein | HC |
chr1:38701697-38699329 | 20130731
Length = 518
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 6/155 (3%)
Query: 164 DEVDRVCKVIDELFALDRNMEAVLDECGVKLSHDLVVDVLQR--FKHAR-KPAFRFFCWA 220
D+V +V ++ + + ++ L + LS++L+ VL+R F HA FF +
Sbjct: 26 DDVHKVYTILTTTSSPE-TLKQSLKSTQIFLSNELIDQVLKRVRFGHANPNQTLEFFRYT 84
Query: 221 GQRPGFAHDSRTYNSMMGILGKTRQFETMVAMLEEM--GEKGLLTMETFSIAIKAFALAK 278
G+R GF H + + ++M+ ILG++R F+ + +L E ++ ++T T + + A
Sbjct: 85 GRRKGFYHTAYSLDTMLYILGRSRMFDHVWELLIEARRKDQNVITPRTVMVVLGRVAKVC 144
Query: 279 ERKKAVGIFDLMKKHKFKVGVDAVNFLLGSLVAAK 313
++ V F KK GV+ N LL +L K
Sbjct: 145 SVRQTVETFRKFKKIVPDYGVNCFNALLRTLCQEK 179
>Medtr1g100593.1 | PPR containing plant-like protein | HC |
chr1:45524249-45521592 | 20130731
Length = 501
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 10/98 (10%)
Query: 186 VLDECGVKLSHDLVVDVL---------QRFKHARKPAFRFFCWAGQRPGFAHDSRTYNSM 236
VL+E G++ S LV +VL + K A++FF W GQ+ + H + Y+ +
Sbjct: 108 VLEELGIRPSGILVREVLFGILKNINSENKTRCAKLAYKFFVWCGQQEDYRHTANAYHLI 167
Query: 237 MGILGKTRQFETMVAMLEEMGEKGL-LTMETFSIAIKA 273
M I + ++F+ + +++EM KG T TF+I I+
Sbjct: 168 MNIYAECKEFKALWRLVDEMIGKGYKATARTFNILIRT 205
>Medtr1g100593.2 | PPR containing plant-like protein | HC |
chr1:45524249-45520736 | 20130731
Length = 501
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 10/98 (10%)
Query: 186 VLDECGVKLSHDLVVDVL---------QRFKHARKPAFRFFCWAGQRPGFAHDSRTYNSM 236
VL+E G++ S LV +VL + K A++FF W GQ+ + H + Y+ +
Sbjct: 108 VLEELGIRPSGILVREVLFGILKNINSENKTRCAKLAYKFFVWCGQQEDYRHTANAYHLI 167
Query: 237 MGILGKTRQFETMVAMLEEMGEKGL-LTMETFSIAIKA 273
M I + ++F+ + +++EM KG T TF+I I+
Sbjct: 168 MNIYAECKEFKALWRLVDEMIGKGYKATARTFNILIRT 205
>Medtr1g011520.1 | PPR containing plant-like protein | HC |
chr1:2060030-2064273 | 20130731
Length = 587
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 59/114 (51%), Gaps = 6/114 (5%)
Query: 187 LDECGVKLSHDLVVDVLQRFKHARKPAFRFFCWAGQRPGFAHDSRTYNSMMGILGKTRQF 246
L + G+K + L+ V F + K + WA +PGF DS ++S++ L K ++F
Sbjct: 95 LTQTGIKPTPPLLHAVFDHFASSPKLLHSLYLWALNQPGFKPDSSLFDSVINALAKMKEF 154
Query: 247 ETMVAML------EEMGEKGLLTMETFSIAIKAFALAKERKKAVGIFDLMKKHK 294
+ +++ ++ ++ L+++ TF+I I+ +A A K A+ F+ K K
Sbjct: 155 DDAWSLVLDRIRRDDDDDEKLVSVGTFAIIIRRYARAGMHKAAIRTFEFAKDKK 208
>Medtr3g114700.1 | PPR containing plant-like protein | HC |
chr3:53562677-53565345 | 20130731
Length = 530
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 50/98 (51%), Gaps = 1/98 (1%)
Query: 213 AFRFFCWAGQRPGFAHDSRTYNSMMGILGKTRQFETMVAMLEEMGEKGL-LTMETFSIAI 271
+ FF WA GF YN M+ + GK R F+ +++ M +G+ +T+ TFS+ +
Sbjct: 126 SLAFFNWATTLEGFPSSPEPYNEMIDLAGKLRHFDLAWHLIDLMKSRGVRITVSTFSVLV 185
Query: 272 KAFALAKERKKAVGIFDLMKKHKFKVGVDAVNFLLGSL 309
+ + A +AV F+ M+ + K + + ++ SL
Sbjct: 186 RRYVRAGLAAEAVHAFNRMEDYGCKPDKVSFSIVISSL 223