Miyakogusa Predicted Gene

Lj6g3v1971250.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1971250.1 Non Characterized Hit- tr|I1M1Q6|I1M1Q6_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,82.52,0,seg,NULL;
coiled-coil,NULL; no description,NULL; P-loop containing nucleoside
triphosphate hydrolase,CUFF.60372.1
         (618 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g017980.1 | DNA polymerase III subunit gamma/tau | HC | ch...   901   0.0  
Medtr2g017980.2 | DNA polymerase III subunit gamma/tau | HC | ch...   901   0.0  
Medtr4g134530.1 | DNA polymerase III subunit gamma/tau | HC | ch...   215   1e-55
Medtr3g075260.1 | DNA polymerase III subunit gamma/tau | HC | ch...   194   2e-49
Medtr3g075260.2 | DNA polymerase III subunit gamma/tau | HC | ch...   187   3e-47
Medtr4g104350.2 | DNA polymerase III subunit gamma/tau | HC | ch...   179   1e-44
Medtr4g104350.1 | DNA polymerase III subunit gamma/tau | HC | ch...   175   1e-43
Medtr3g088380.1 | replication factor C subunit 2 | HC | chr3:401...    57   7e-08
Medtr3g088380.2 | replication factor C subunit 2 | HC | chr3:401...    57   7e-08

>Medtr2g017980.1 | DNA polymerase III subunit gamma/tau | HC |
            chr2:5258656-5265014 | 20130731
          Length = 1177

 Score =  901 bits (2329), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 461/634 (72%), Positives = 510/634 (80%), Gaps = 36/634 (5%)

Query: 1    MDLLDNMTVPQLPSQYRVFIFDECDTLSADCWNAISKVIDRAPRRVVFILVSSSLDVLPH 60
            MDLLDNM V QLPSQYRVFIFD+CD+LSADCWNAISKVIDRAPRRVVFILVS+SLDVLPH
Sbjct: 564  MDLLDNMIVSQLPSQYRVFIFDDCDSLSADCWNAISKVIDRAPRRVVFILVSTSLDVLPH 623

Query: 61   IIISRCQKFFFPKLKDSDIIYTLQLIATEEGLEIDQDALKLIASRSDGSLRDAEMTLEQL 120
            IIISRCQKFFFPKLKDSDI+YTL  IAT+EGL+ID+DALKLIASRSDGSLRDAEMTLEQL
Sbjct: 624  IIISRCQKFFFPKLKDSDIVYTLHGIATKEGLDIDKDALKLIASRSDGSLRDAEMTLEQL 683

Query: 121  SLLGQRISVPLVQELVGLISDEKXXXXXXXXXXXXTVNTVKNLRAIMETGVEPLALMSQL 180
            SLLGQRISVPLVQELVGLISDEK            TVNTVKNLR IME GVEPLALMSQL
Sbjct: 684  SLLGQRISVPLVQELVGLISDEKLVDLLDLALSADTVNTVKNLRVIMEAGVEPLALMSQL 743

Query: 181  ATVITDILAGSYDFTKEXXXXXXXXXXPLSKEDMEKLRQALKTLSEAEKQLRMSNDKXXX 240
            ATVITDILAG+YDFTKE          PLSKEDMEKLRQALKTLSEAEKQLRMSNDK   
Sbjct: 744  ATVITDILAGTYDFTKERCRRKFFRRQPLSKEDMEKLRQALKTLSEAEKQLRMSNDKLTW 803

Query: 241  XXXXXXXXXPDQQYVLPTSSDHSFNHSPLDVKNGDVRDAARITGNPVEINNKGRRLSVDG 300
                     PDQQY LPTSSD+SFNHSP  + NG+V++A R TGNPVEI N+ RR+S+D 
Sbjct: 804  LTAALLQLAPDQQYGLPTSSDNSFNHSPFALNNGNVKEATRNTGNPVEILNRTRRMSMDA 863

Query: 301  RIENFHAGSSADGVTKGPGSEKRRLSVSGCTPQHTYPHATNNIRVNERLIAGKNRKEIEE 360
            R+E+ +AGSSAD          RR S+SG  PQHTY H+T+  R+NER  + +NRKEI+E
Sbjct: 864  RMESSNAGSSAD----------RRHSLSGYAPQHTYSHSTDKTRINERQTSDRNRKEIDE 913

Query: 361  IWFEVLERVQVTGLKEFLYKEGKLISVNFGPAPTVQLMFSSQLTKTTAEKYTGHILQAFE 420
            IW EVLER+   GLKEFLYK GKLI ++FG APTVQLMF+SQL+K+TAEK+TGHILQAFE
Sbjct: 914  IWLEVLERIHYPGLKEFLYKAGKLIFISFGAAPTVQLMFNSQLSKSTAEKFTGHILQAFE 973

Query: 421  SVLGSSIIMEIRCESNKDAGSAIQLPLILPSINNGPSQIRNLNGVGTETHPSLTDSVEKR 480
            SVLGSS+ +EIRCE+NKDAGS +QLPL+LPSIN+G SQ+R+LN VGT          EKR
Sbjct: 974  SVLGSSVTIEIRCEANKDAGSPVQLPLVLPSINDGSSQVRDLNDVGT----------EKR 1023

Query: 481  RGEIVEEAAS----------------VKSLQCTSTRQASASRKNPNVKSHLDQRKLREES 524
            R EIVEE AS                 K+   TS  Q  AS+K P VKSHL +RKL E+S
Sbjct: 1024 RSEIVEEEASHMEHKNNEQQVDGHATYKNQDGTSMGQVLASQKVPIVKSHLVRRKLSEQS 1083

Query: 525  QCRSLVKSKVSLAHVIQQAEGQRSGWSKRKAVSIAEKLEQENLRLEPRSRSLLCWKASRA 584
            Q RSLVKSKVSLAHVIQ+AEGQRSGWSKRKAVSIAEKLEQENLRLEPRSRSLLCWKASRA
Sbjct: 1084 QSRSLVKSKVSLAHVIQRAEGQRSGWSKRKAVSIAEKLEQENLRLEPRSRSLLCWKASRA 1143

Query: 585  TRRKLSRLKIRTRKPRALLNLVPCGRCLSTKSPR 618
            TRRKLSRLKIRT+K  ALLNLV CG+CL+TKSPR
Sbjct: 1144 TRRKLSRLKIRTQKTHALLNLVSCGKCLATKSPR 1177


>Medtr2g017980.2 | DNA polymerase III subunit gamma/tau | HC |
            chr2:5258652-5265014 | 20130731
          Length = 1177

 Score =  901 bits (2329), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 461/634 (72%), Positives = 510/634 (80%), Gaps = 36/634 (5%)

Query: 1    MDLLDNMTVPQLPSQYRVFIFDECDTLSADCWNAISKVIDRAPRRVVFILVSSSLDVLPH 60
            MDLLDNM V QLPSQYRVFIFD+CD+LSADCWNAISKVIDRAPRRVVFILVS+SLDVLPH
Sbjct: 564  MDLLDNMIVSQLPSQYRVFIFDDCDSLSADCWNAISKVIDRAPRRVVFILVSTSLDVLPH 623

Query: 61   IIISRCQKFFFPKLKDSDIIYTLQLIATEEGLEIDQDALKLIASRSDGSLRDAEMTLEQL 120
            IIISRCQKFFFPKLKDSDI+YTL  IAT+EGL+ID+DALKLIASRSDGSLRDAEMTLEQL
Sbjct: 624  IIISRCQKFFFPKLKDSDIVYTLHGIATKEGLDIDKDALKLIASRSDGSLRDAEMTLEQL 683

Query: 121  SLLGQRISVPLVQELVGLISDEKXXXXXXXXXXXXTVNTVKNLRAIMETGVEPLALMSQL 180
            SLLGQRISVPLVQELVGLISDEK            TVNTVKNLR IME GVEPLALMSQL
Sbjct: 684  SLLGQRISVPLVQELVGLISDEKLVDLLDLALSADTVNTVKNLRVIMEAGVEPLALMSQL 743

Query: 181  ATVITDILAGSYDFTKEXXXXXXXXXXPLSKEDMEKLRQALKTLSEAEKQLRMSNDKXXX 240
            ATVITDILAG+YDFTKE          PLSKEDMEKLRQALKTLSEAEKQLRMSNDK   
Sbjct: 744  ATVITDILAGTYDFTKERCRRKFFRRQPLSKEDMEKLRQALKTLSEAEKQLRMSNDKLTW 803

Query: 241  XXXXXXXXXPDQQYVLPTSSDHSFNHSPLDVKNGDVRDAARITGNPVEINNKGRRLSVDG 300
                     PDQQY LPTSSD+SFNHSP  + NG+V++A R TGNPVEI N+ RR+S+D 
Sbjct: 804  LTAALLQLAPDQQYGLPTSSDNSFNHSPFALNNGNVKEATRNTGNPVEILNRTRRMSMDA 863

Query: 301  RIENFHAGSSADGVTKGPGSEKRRLSVSGCTPQHTYPHATNNIRVNERLIAGKNRKEIEE 360
            R+E+ +AGSSAD          RR S+SG  PQHTY H+T+  R+NER  + +NRKEI+E
Sbjct: 864  RMESSNAGSSAD----------RRHSLSGYAPQHTYSHSTDKTRINERQTSDRNRKEIDE 913

Query: 361  IWFEVLERVQVTGLKEFLYKEGKLISVNFGPAPTVQLMFSSQLTKTTAEKYTGHILQAFE 420
            IW EVLER+   GLKEFLYK GKLI ++FG APTVQLMF+SQL+K+TAEK+TGHILQAFE
Sbjct: 914  IWLEVLERIHYPGLKEFLYKAGKLIFISFGAAPTVQLMFNSQLSKSTAEKFTGHILQAFE 973

Query: 421  SVLGSSIIMEIRCESNKDAGSAIQLPLILPSINNGPSQIRNLNGVGTETHPSLTDSVEKR 480
            SVLGSS+ +EIRCE+NKDAGS +QLPL+LPSIN+G SQ+R+LN VGT          EKR
Sbjct: 974  SVLGSSVTIEIRCEANKDAGSPVQLPLVLPSINDGSSQVRDLNDVGT----------EKR 1023

Query: 481  RGEIVEEAAS----------------VKSLQCTSTRQASASRKNPNVKSHLDQRKLREES 524
            R EIVEE AS                 K+   TS  Q  AS+K P VKSHL +RKL E+S
Sbjct: 1024 RSEIVEEEASHMEHKNNEQQVDGHATYKNQDGTSMGQVLASQKVPIVKSHLVRRKLSEQS 1083

Query: 525  QCRSLVKSKVSLAHVIQQAEGQRSGWSKRKAVSIAEKLEQENLRLEPRSRSLLCWKASRA 584
            Q RSLVKSKVSLAHVIQ+AEGQRSGWSKRKAVSIAEKLEQENLRLEPRSRSLLCWKASRA
Sbjct: 1084 QSRSLVKSKVSLAHVIQRAEGQRSGWSKRKAVSIAEKLEQENLRLEPRSRSLLCWKASRA 1143

Query: 585  TRRKLSRLKIRTRKPRALLNLVPCGRCLSTKSPR 618
            TRRKLSRLKIRT+K  ALLNLV CG+CL+TKSPR
Sbjct: 1144 TRRKLSRLKIRTQKTHALLNLVSCGKCLATKSPR 1177


>Medtr4g134530.1 | DNA polymerase III subunit gamma/tau | HC |
           chr4:56342192-56348822 | 20130731
          Length = 1203

 Score =  215 bits (547), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 108/223 (48%), Positives = 148/223 (66%)

Query: 15  QYRVFIFDECDTLSADCWNAISKVIDRAPRRVVFILVSSSLDVLPHIIISRCQKFFFPKL 74
           +Y VF+ DEC  L++  W    K ++  P+RVVFI ++S LD +P  I SRCQK+ F K+
Sbjct: 543 RYTVFVIDECHLLTSKTWLGFLKFLEAPPQRVVFIFITSDLDNVPRTIQSRCQKYLFNKI 602

Query: 75  KDSDIIYTLQLIATEEGLEIDQDALKLIASRSDGSLRDAEMTLEQLSLLGQRISVPLVQE 134
           KD DI+  L+ I+T+E L+++ DAL LIA  +DGSLRDAE  LEQLSLLG+RI+  LV E
Sbjct: 603 KDGDIVTRLRKISTQENLDVETDALDLIALNADGSLRDAETMLEQLSLLGKRITTSLVNE 662

Query: 135 LVGLISDEKXXXXXXXXXXXXTVNTVKNLRAIMETGVEPLALMSQLATVITDILAGSYDF 194
           LVG++SDEK            T  TVK  R +M++GV+P+ LMSQLA +I DI+AGSY  
Sbjct: 663 LVGVVSDEKLLELLELAMSSDTAETVKRSRELMDSGVDPMVLMSQLAGLIMDIIAGSYAV 722

Query: 195 TKEXXXXXXXXXXPLSKEDMEKLRQALKTLSEAEKQLRMSNDK 237
                         L++ ++E+L+ ALK LSEAEKQLR S+++
Sbjct: 723 VDTKPDGSFFGGRSLNETELERLKNALKLLSEAEKQLRTSSER 765


>Medtr3g075260.1 | DNA polymerase III subunit gamma/tau | HC |
           chr3:34261613-34257458 | 20130731
          Length = 903

 Score =  194 bits (494), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 134/434 (30%), Positives = 217/434 (50%), Gaps = 62/434 (14%)

Query: 3   LLDNMTVPQLPSQYRVFIFDECDTLSADCWNAISKVIDRAPRRVVFILVSSSLDVLPHII 62
           L+ N   P + S+++VFI DEC  L+ + W  +S   D   +  VF+++++ LD LP   
Sbjct: 368 LVKNACTPPVSSRFKVFIIDECQLLNPETWACLSNNQDNISQHAVFVMITTDLDKLPQSA 427

Query: 63  ISRCQKFFFPKLKDSDIIYTLQLIATEEGLEIDQDALKLIASRSDGSLRDAEMTLEQLSL 122
           +SR QK++FPK++D++I   L+ I TEEGL+ +Q AL LIA+RS GS+RDAE+ L+QLSL
Sbjct: 428 VSRAQKYYFPKVQDANIACKLEKICTEEGLDFEQAALDLIAARSCGSVRDAEIMLDQLSL 487

Query: 123 LGQRISVPLVQELVGLISDEKXXXXXXXXXXXXTVNTVKNLRAIMETGVEPLALMSQLAT 182
           LG++I + LV EL G++SD++            T NTV   R +M + ++PL L+SQL  
Sbjct: 488 LGKKIKISLVYELTGIVSDDELLDLLDLALSPDTSNTVIRARELMRSRIDPLQLVSQLVN 547

Query: 183 VITDILAGSYDFTKEXXXXXXXXXXPLSKEDMEKLRQALKTLSEAEKQLRMSNDKXXXXX 242
           +I DILAG+++   +            SK D+ KL  AL+  +EAEKQLR+S ++     
Sbjct: 548 LIMDILAGNHENGGDEVRSKYSSRYT-SKADLRKLSHALRIFTEAEKQLRISKNQSTW-- 604

Query: 243 XXXXXXXPDQQYVLPTSSDHSFNHSPLDVKNGDVRDAARITGNPVEINNKGRRLSVDGRI 302
                                F  + L + + D   +    GN + +        +   +
Sbjct: 605 ---------------------FTVALLQLSSADY-PSTDADGNKLSLGGACNGDELGKNM 642

Query: 303 ENFHAGSSADGVTKGPGSEKRRLSVSGCTPQHTYPHATNNIRVNERLIAGKNRK-EIEEI 361
           E+F AGS           E +                        RL+A ++ +  ++ I
Sbjct: 643 EHFDAGS----------CENKSF----------------------RLVAQEDHEGTLDAI 670

Query: 362 WFEVLERVQVTGLKEFLYKEGKLISVNFGPAPT----VQLMFSSQLTKTTAEKYTGHILQ 417
           W++     Q + LK FL ++GKL S+    + +    V+L F  +   + AEK    I  
Sbjct: 671 WYKATGICQSSKLKTFLRRKGKLSSLLVDQSTSSLAIVELEFGRRHHVSKAEKSWKLIAS 730

Query: 418 AFESVLGSSIIMEI 431
           + + +LG +I + I
Sbjct: 731 SLQCLLGCNIELRI 744


>Medtr3g075260.2 | DNA polymerase III subunit gamma/tau | HC |
           chr3:34261100-34257458 | 20130731
          Length = 653

 Score =  187 bits (474), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 98/235 (41%), Positives = 149/235 (63%), Gaps = 1/235 (0%)

Query: 3   LLDNMTVPQLPSQYRVFIFDECDTLSADCWNAISKVIDRAPRRVVFILVSSSLDVLPHII 62
           L+ N   P + S+++VFI DEC  L+ + W  +S   D   +  VF+++++ LD LP   
Sbjct: 368 LVKNACTPPVSSRFKVFIIDECQLLNPETWACLSNNQDNISQHAVFVMITTDLDKLPQSA 427

Query: 63  ISRCQKFFFPKLKDSDIIYTLQLIATEEGLEIDQDALKLIASRSDGSLRDAEMTLEQLSL 122
           +SR QK++FPK++D++I   L+ I TEEGL+ +Q AL LIA+RS GS+RDAE+ L+QLSL
Sbjct: 428 VSRAQKYYFPKVQDANIACKLEKICTEEGLDFEQAALDLIAARSCGSVRDAEIMLDQLSL 487

Query: 123 LGQRISVPLVQELVGLISDEKXXXXXXXXXXXXTVNTVKNLRAIMETGVEPLALMSQLAT 182
           LG++I + LV EL G++SD++            T NTV   R +M + ++PL L+SQL  
Sbjct: 488 LGKKIKISLVYELTGIVSDDELLDLLDLALSPDTSNTVIRARELMRSRIDPLQLVSQLVN 547

Query: 183 VITDILAGSYDFTKEXXXXXXXXXXPLSKEDMEKLRQALKTLSEAEKQLRMSNDK 237
           +I DILAG+++   +            SK D+ KL  AL+  +EAEKQLR+S ++
Sbjct: 548 LIMDILAGNHENGGDEVRSKYSSRYT-SKADLRKLSHALRIFTEAEKQLRISKNQ 601


>Medtr4g104350.2 | DNA polymerase III subunit gamma/tau | HC |
           chr4:43113918-43109005 | 20130731
          Length = 936

 Score =  179 bits (453), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 99/230 (43%), Positives = 142/230 (61%)

Query: 8   TVPQLPSQYRVFIFDECDTLSADCWNAISKVIDRAPRRVVFILVSSSLDVLPHIIISRCQ 67
           T     S+Y+VFI DEC  L+ + W  +   +    + VVF++++  L+ LP   ISR Q
Sbjct: 387 TTAPFSSRYKVFIIDECQLLNKETWATLLNSLGVFSQHVVFVMITPDLEKLPRSAISRAQ 446

Query: 68  KFFFPKLKDSDIIYTLQLIATEEGLEIDQDALKLIASRSDGSLRDAEMTLEQLSLLGQRI 127
           ++ F K+KD+DI   L+ I  EEGLE +QDAL  IA++S GSLRDAEM L+QLSLLG++I
Sbjct: 447 RYHFTKIKDADIASRLKRICVEEGLESEQDALDFIAAKSCGSLRDAEMMLDQLSLLGKKI 506

Query: 128 SVPLVQELVGLISDEKXXXXXXXXXXXXTVNTVKNLRAIMETGVEPLALMSQLATVITDI 187
           ++ LV EL G+ISD++            T NTV   R ++ + ++PL L+SQLA +I DI
Sbjct: 507 TISLVYELTGVISDDELLDLLDLSLSSDTSNTVIRARELLRSRIDPLQLISQLANLIMDI 566

Query: 188 LAGSYDFTKEXXXXXXXXXXPLSKEDMEKLRQALKTLSEAEKQLRMSNDK 237
           LAG  + T             L++  M+KL  AL+ LSE EKQLR+S ++
Sbjct: 567 LAGKCELTGSEIRRRFSDRHILAESSMQKLSHALRILSETEKQLRISKNQ 616


>Medtr4g104350.1 | DNA polymerase III subunit gamma/tau | HC |
           chr4:43113306-43108849 | 20130731
          Length = 935

 Score =  175 bits (443), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 99/230 (43%), Positives = 142/230 (61%), Gaps = 1/230 (0%)

Query: 8   TVPQLPSQYRVFIFDECDTLSADCWNAISKVIDRAPRRVVFILVSSSLDVLPHIIISRCQ 67
           T     S+Y+VFI DEC  L+ + W  +   +    + VVF++++  L+ LP   ISR Q
Sbjct: 387 TTAPFSSRYKVFIIDECQLLNKETWATLLNSLGVFSQHVVFVMITPDLEKLPRSAISRAQ 446

Query: 68  KFFFPKLKDSDIIYTLQLIATEEGLEIDQDALKLIASRSDGSLRDAEMTLEQLSLLGQRI 127
           ++ F K+KD+DI   L+ I  EEGLE +QDAL  IA++S GSLRDAEM L+QLSLLG++I
Sbjct: 447 RYHFTKIKDADIASRLKRICVEEGLESEQDALDFIAAKSCGSLRDAEMMLDQLSLLGKKI 506

Query: 128 SVPLVQELVGLISDEKXXXXXXXXXXXXTVNTVKNLRAIMETGVEPLALMSQLATVITDI 187
           ++ LV EL G+ISD++            T NTV   R ++ + ++PL L+SQLA +I DI
Sbjct: 507 TISLVYELTGVISDDELLDLLDLSLSSDTSNTVIRARELLRSRIDPLQLISQLANLIMDI 566

Query: 188 LAGSYDFTKEXXXXXXXXXXPLSKEDMEKLRQALKTLSEAEKQLRMSNDK 237
           LAG  + T             +S+  M+KL  AL+ LSE EKQLR+S ++
Sbjct: 567 LAGKCELTGSEIRRRFSDRH-ISESSMQKLSHALRILSETEKQLRISKNQ 615


>Medtr3g088380.1 | replication factor C subunit 2 | HC |
           chr3:40162477-40157119 | 20130731
          Length = 339

 Score = 56.6 bits (135), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 64/128 (50%), Gaps = 1/128 (0%)

Query: 16  YRVFIFDECDTLSADCWNAISKVIDRAPRRVVFILVSSSLDVLPHIIISRCQKFFFPKLK 75
           Y++ + DE D+++ D  NA+ + ++   +   F  + + +  +   + SRC KF F  L 
Sbjct: 116 YKIIVLDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLT 175

Query: 76  DSDIIYTLQLIATEEGLEIDQDALKLIASRSDGSLRDAEMTLEQLS-LLGQRISVPLVQE 134
           +  +   +  I  EEG+ +D + L  +++ S G LR A   L+  + L G  IS   +  
Sbjct: 176 EEIMSSRIVYICKEEGIYLDAEGLSTLSNISQGDLRRAITYLQSAARLFGSSISSKDLIS 235

Query: 135 LVGLISDE 142
           + G++  E
Sbjct: 236 VSGIVPAE 243


>Medtr3g088380.2 | replication factor C subunit 2 | HC |
           chr3:40162519-40157119 | 20130731
          Length = 339

 Score = 56.6 bits (135), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 64/128 (50%), Gaps = 1/128 (0%)

Query: 16  YRVFIFDECDTLSADCWNAISKVIDRAPRRVVFILVSSSLDVLPHIIISRCQKFFFPKLK 75
           Y++ + DE D+++ D  NA+ + ++   +   F  + + +  +   + SRC KF F  L 
Sbjct: 116 YKIIVLDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLT 175

Query: 76  DSDIIYTLQLIATEEGLEIDQDALKLIASRSDGSLRDAEMTLEQLS-LLGQRISVPLVQE 134
           +  +   +  I  EEG+ +D + L  +++ S G LR A   L+  + L G  IS   +  
Sbjct: 176 EEIMSSRIVYICKEEGIYLDAEGLSTLSNISQGDLRRAITYLQSAARLFGSSISSKDLIS 235

Query: 135 LVGLISDE 142
           + G++  E
Sbjct: 236 VSGIVPAE 243