Miyakogusa Predicted Gene

Lj6g3v1968150.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1968150.1 Non Characterized Hit- tr|G7ILM7|G7ILM7_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,75.61,0.00000007, ,CUFF.60361.1
         (48 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g017800.1 | ankyrin repeat protein | HC | chr2:5332285-533...    62   2e-10
Medtr2g017930.1 | ankyrin repeat protein | HC | chr2:5314383-531...    61   3e-10

>Medtr2g017800.1 | ankyrin repeat protein | HC |
           chr2:5332285-5331190 | 20130731
          Length = 263

 Score = 61.6 bits (148), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 31/41 (75%), Positives = 35/41 (85%)

Query: 8   GTALLLLERYGELAHEKEDSGLTTLQLLANMPSAFKSQTQM 48
           GTAL LL+ YGELA +KE++ LT LQLLA MPSAFKSQTQM
Sbjct: 170 GTALFLLKGYGELAVQKEENDLTALQLLAKMPSAFKSQTQM 210


>Medtr2g017930.1 | ankyrin repeat protein | HC |
           chr2:5314383-5317832 | 20130731
          Length = 674

 Score = 60.8 bits (146), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 31/41 (75%), Positives = 33/41 (80%)

Query: 8   GTALLLLERYGELAHEKEDSGLTTLQLLANMPSAFKSQTQM 48
           GTAL LL+RY ELA  KE + LTTLQLL  MPSAFKSQTQM
Sbjct: 168 GTALWLLKRYNELADLKEQNDLTTLQLLTKMPSAFKSQTQM 208