Miyakogusa Predicted Gene

Lj6g3v1966510.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1966510.2 Non Characterized Hit- tr|J3L1H7|J3L1H7_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB01G3,34.48,2e-18,zf-MYND,Zinc finger, MYND-type;
PDCD2_C,Programmed cell death protein 2, C-terminal; ZF_MYND_1,Zinc
,CUFF.60332.2
         (208 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g105630.5 | programmed cell death protein | HC | chr7:4284...   314   3e-86
Medtr7g105630.4 | programmed cell death protein | HC | chr7:4284...   314   3e-86
Medtr7g105630.1 | programmed cell death protein | HC | chr7:4284...   314   3e-86
Medtr7g105630.3 | programmed cell death protein | HC | chr7:4284...   314   3e-86
Medtr7g105630.2 | programmed cell death protein | HC | chr7:4284...   314   3e-86

>Medtr7g105630.5 | programmed cell death protein | HC |
           chr7:42841463-42836119 | 20130731
          Length = 323

 Score =  314 bits (805), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 153/208 (73%), Positives = 177/208 (85%), Gaps = 5/208 (2%)

Query: 1   MLFVFICPSMTCLLRDQHEQWKRHPERPSRSVKVFRCQLPCVNPFYSSECPKDDGSHKPA 60
           MLFVF+CPSMTCLLRDQHEQWKR+PERPSRSVKVFRCQLP +NPFYSSECPK DGS KP 
Sbjct: 120 MLFVFMCPSMTCLLRDQHEQWKRNPERPSRSVKVFRCQLPRINPFYSSECPKYDGSDKPT 179

Query: 61  TSGAALCDWCGTWKGDKLCSSCRQVRYCCEKHQVMSWRSGHKIACQQIKVSSSVSGPNKS 120
            +GAALCDWCGTWKGDKLCSSC+QVRYC EKHQ MSWR+ H IACQQIKVS  V GPNK+
Sbjct: 180 GTGAALCDWCGTWKGDKLCSSCKQVRYCSEKHQTMSWRAEHNIACQQIKVSLPVCGPNKN 239

Query: 121 VTTSLESRKVGSNNVWPEFEITIEDESEYNRDISDTLANSLRLSDSLISKNTADESMNLD 180
            TTSLES KVG+ + WPEFEI IED+SE N+D+S+  A    L++SLI +N +D++MN  
Sbjct: 240 GTTSLESCKVGNKHTWPEFEI-IEDQSECNKDVSEDNA----LANSLILRNRSDDTMNSL 294

Query: 181 LDSFQGDDEKKSWVSFQDRIAKAPEQVL 208
           +DSFQGD++K+SW  FQ+RIAK PEQVL
Sbjct: 295 MDSFQGDEDKRSWAHFQERIAKDPEQVL 322


>Medtr7g105630.4 | programmed cell death protein | HC |
           chr7:42841463-42836119 | 20130731
          Length = 323

 Score =  314 bits (805), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 153/208 (73%), Positives = 177/208 (85%), Gaps = 5/208 (2%)

Query: 1   MLFVFICPSMTCLLRDQHEQWKRHPERPSRSVKVFRCQLPCVNPFYSSECPKDDGSHKPA 60
           MLFVF+CPSMTCLLRDQHEQWKR+PERPSRSVKVFRCQLP +NPFYSSECPK DGS KP 
Sbjct: 120 MLFVFMCPSMTCLLRDQHEQWKRNPERPSRSVKVFRCQLPRINPFYSSECPKYDGSDKPT 179

Query: 61  TSGAALCDWCGTWKGDKLCSSCRQVRYCCEKHQVMSWRSGHKIACQQIKVSSSVSGPNKS 120
            +GAALCDWCGTWKGDKLCSSC+QVRYC EKHQ MSWR+ H IACQQIKVS  V GPNK+
Sbjct: 180 GTGAALCDWCGTWKGDKLCSSCKQVRYCSEKHQTMSWRAEHNIACQQIKVSLPVCGPNKN 239

Query: 121 VTTSLESRKVGSNNVWPEFEITIEDESEYNRDISDTLANSLRLSDSLISKNTADESMNLD 180
            TTSLES KVG+ + WPEFEI IED+SE N+D+S+  A    L++SLI +N +D++MN  
Sbjct: 240 GTTSLESCKVGNKHTWPEFEI-IEDQSECNKDVSEDNA----LANSLILRNRSDDTMNSL 294

Query: 181 LDSFQGDDEKKSWVSFQDRIAKAPEQVL 208
           +DSFQGD++K+SW  FQ+RIAK PEQVL
Sbjct: 295 MDSFQGDEDKRSWAHFQERIAKDPEQVL 322


>Medtr7g105630.1 | programmed cell death protein | HC |
           chr7:42841436-42836119 | 20130731
          Length = 417

 Score =  314 bits (805), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 153/208 (73%), Positives = 177/208 (85%), Gaps = 5/208 (2%)

Query: 1   MLFVFICPSMTCLLRDQHEQWKRHPERPSRSVKVFRCQLPCVNPFYSSECPKDDGSHKPA 60
           MLFVF+CPSMTCLLRDQHEQWKR+PERPSRSVKVFRCQLP +NPFYSSECPK DGS KP 
Sbjct: 120 MLFVFMCPSMTCLLRDQHEQWKRNPERPSRSVKVFRCQLPRINPFYSSECPKYDGSDKPT 179

Query: 61  TSGAALCDWCGTWKGDKLCSSCRQVRYCCEKHQVMSWRSGHKIACQQIKVSSSVSGPNKS 120
            +GAALCDWCGTWKGDKLCSSC+QVRYC EKHQ MSWR+ H IACQQIKVS  V GPNK+
Sbjct: 180 GTGAALCDWCGTWKGDKLCSSCKQVRYCSEKHQTMSWRAEHNIACQQIKVSLPVCGPNKN 239

Query: 121 VTTSLESRKVGSNNVWPEFEITIEDESEYNRDISDTLANSLRLSDSLISKNTADESMNLD 180
            TTSLES KVG+ + WPEFEI IED+SE N+D+S+  A    L++SLI +N +D++MN  
Sbjct: 240 GTTSLESCKVGNKHTWPEFEI-IEDQSECNKDVSEDNA----LANSLILRNRSDDTMNSL 294

Query: 181 LDSFQGDDEKKSWVSFQDRIAKAPEQVL 208
           +DSFQGD++K+SW  FQ+RIAK PEQVL
Sbjct: 295 MDSFQGDEDKRSWAHFQERIAKDPEQVL 322


>Medtr7g105630.3 | programmed cell death protein | HC |
           chr7:42841463-42836108 | 20130731
          Length = 417

 Score =  314 bits (805), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 153/208 (73%), Positives = 177/208 (85%), Gaps = 5/208 (2%)

Query: 1   MLFVFICPSMTCLLRDQHEQWKRHPERPSRSVKVFRCQLPCVNPFYSSECPKDDGSHKPA 60
           MLFVF+CPSMTCLLRDQHEQWKR+PERPSRSVKVFRCQLP +NPFYSSECPK DGS KP 
Sbjct: 120 MLFVFMCPSMTCLLRDQHEQWKRNPERPSRSVKVFRCQLPRINPFYSSECPKYDGSDKPT 179

Query: 61  TSGAALCDWCGTWKGDKLCSSCRQVRYCCEKHQVMSWRSGHKIACQQIKVSSSVSGPNKS 120
            +GAALCDWCGTWKGDKLCSSC+QVRYC EKHQ MSWR+ H IACQQIKVS  V GPNK+
Sbjct: 180 GTGAALCDWCGTWKGDKLCSSCKQVRYCSEKHQTMSWRAEHNIACQQIKVSLPVCGPNKN 239

Query: 121 VTTSLESRKVGSNNVWPEFEITIEDESEYNRDISDTLANSLRLSDSLISKNTADESMNLD 180
            TTSLES KVG+ + WPEFEI IED+SE N+D+S+  A    L++SLI +N +D++MN  
Sbjct: 240 GTTSLESCKVGNKHTWPEFEI-IEDQSECNKDVSEDNA----LANSLILRNRSDDTMNSL 294

Query: 181 LDSFQGDDEKKSWVSFQDRIAKAPEQVL 208
           +DSFQGD++K+SW  FQ+RIAK PEQVL
Sbjct: 295 MDSFQGDEDKRSWAHFQERIAKDPEQVL 322


>Medtr7g105630.2 | programmed cell death protein | HC |
           chr7:42841463-42836119 | 20130731
          Length = 417

 Score =  314 bits (805), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 153/208 (73%), Positives = 177/208 (85%), Gaps = 5/208 (2%)

Query: 1   MLFVFICPSMTCLLRDQHEQWKRHPERPSRSVKVFRCQLPCVNPFYSSECPKDDGSHKPA 60
           MLFVF+CPSMTCLLRDQHEQWKR+PERPSRSVKVFRCQLP +NPFYSSECPK DGS KP 
Sbjct: 120 MLFVFMCPSMTCLLRDQHEQWKRNPERPSRSVKVFRCQLPRINPFYSSECPKYDGSDKPT 179

Query: 61  TSGAALCDWCGTWKGDKLCSSCRQVRYCCEKHQVMSWRSGHKIACQQIKVSSSVSGPNKS 120
            +GAALCDWCGTWKGDKLCSSC+QVRYC EKHQ MSWR+ H IACQQIKVS  V GPNK+
Sbjct: 180 GTGAALCDWCGTWKGDKLCSSCKQVRYCSEKHQTMSWRAEHNIACQQIKVSLPVCGPNKN 239

Query: 121 VTTSLESRKVGSNNVWPEFEITIEDESEYNRDISDTLANSLRLSDSLISKNTADESMNLD 180
            TTSLES KVG+ + WPEFEI IED+SE N+D+S+  A    L++SLI +N +D++MN  
Sbjct: 240 GTTSLESCKVGNKHTWPEFEI-IEDQSECNKDVSEDNA----LANSLILRNRSDDTMNSL 294

Query: 181 LDSFQGDDEKKSWVSFQDRIAKAPEQVL 208
           +DSFQGD++K+SW  FQ+RIAK PEQVL
Sbjct: 295 MDSFQGDEDKRSWAHFQERIAKDPEQVL 322