Miyakogusa Predicted Gene

Lj6g3v1951740.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1951740.1 CUFF.60284.1
         (69 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g068040.1 | 60S ribosomal protein L38A | HC | chr4:2550383...   132   9e-32
Medtr8g079485.1 | 60S ribosomal protein L38A | HC | chr8:3407271...   130   3e-31
Medtr2g018680.1 | 60S ribosomal protein L38A | HC | chr2:5904291...   128   1e-30
Medtr4g068040.2 | 60S ribosomal protein L38A | HC | chr4:2550381...   122   1e-28
Medtr2g018680.2 | 60S ribosomal protein L38A | HC | chr2:5904291...   119   8e-28

>Medtr4g068040.1 | 60S ribosomal protein L38A | HC |
          chr4:25503830-25502477 | 20130731
          Length = 69

 Score =  132 bits (331), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 65/69 (94%), Positives = 68/69 (98%)

Query: 1  MPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDPEKADKLKQSL 60
          MPKQI+EIKDFLLTARRKDARSVKIKRS+DVVKFKVRCSKYLYTLCVFD EKADKLKQSL
Sbjct: 1  MPKQINEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDTEKADKLKQSL 60

Query: 61 PPGLSVQDL 69
          PPGL+VQDL
Sbjct: 61 PPGLNVQDL 69


>Medtr8g079485.1 | 60S ribosomal protein L38A | HC |
          chr8:34072716-34071471 | 20130731
          Length = 69

 Score =  130 bits (327), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 64/69 (92%), Positives = 67/69 (97%)

Query: 1  MPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDPEKADKLKQSL 60
          M KQIHEIKDFLLTARRKDARSVKIKRS+DVVKFKVRCSKYLYTLCVFD +KADKLKQSL
Sbjct: 1  MAKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDTDKADKLKQSL 60

Query: 61 PPGLSVQDL 69
          PPGL+VQDL
Sbjct: 61 PPGLTVQDL 69


>Medtr2g018680.1 | 60S ribosomal protein L38A | HC |
          chr2:5904291-5901985 | 20130731
          Length = 69

 Score =  128 bits (321), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 64/69 (92%), Positives = 67/69 (97%)

Query: 1  MPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDPEKADKLKQSL 60
          MPKQI+EIKDFLLTARRKDARSV+IKRS+DVVKFKVRCSKYLYTL VFD EKADKLKQSL
Sbjct: 1  MPKQINEIKDFLLTARRKDARSVRIKRSKDVVKFKVRCSKYLYTLSVFDVEKADKLKQSL 60

Query: 61 PPGLSVQDL 69
          PPGLSVQDL
Sbjct: 61 PPGLSVQDL 69


>Medtr4g068040.2 | 60S ribosomal protein L38A | HC |
          chr4:25503812-25503069 | 20130731
          Length = 63

 Score =  122 bits (305), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 60/63 (95%), Positives = 62/63 (98%)

Query: 1  MPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDPEKADKLKQSL 60
          MPKQI+EIKDFLLTARRKDARSVKIKRS+DVVKFKVRCSKYLYTLCVFD EKADKLKQSL
Sbjct: 1  MPKQINEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDTEKADKLKQSL 60

Query: 61 PPG 63
          PPG
Sbjct: 61 PPG 63


>Medtr2g018680.2 | 60S ribosomal protein L38A | HC |
          chr2:5904291-5902578 | 20130731
          Length = 64

 Score =  119 bits (297), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 59/64 (92%), Positives = 62/64 (96%)

Query: 1  MPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDPEKADKLKQSL 60
          MPKQI+EIKDFLLTARRKDARSV+IKRS+DVVKFKVRCSKYLYTL VFD EKADKLKQSL
Sbjct: 1  MPKQINEIKDFLLTARRKDARSVRIKRSKDVVKFKVRCSKYLYTLSVFDVEKADKLKQSL 60

Query: 61 PPGL 64
          PPGL
Sbjct: 61 PPGL 64