Miyakogusa Predicted Gene

Lj6g3v1946520.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1946520.1 Non Characterized Hit- tr|B4FYI5|B4FYI5_MAIZE
Uncharacterized protein OS=Zea mays PE=2 SV=1,28.02,2e-18,BRCT,BRCT
domain; BRCT domain,BRCT domain; seg,NULL; SUBFAMILY NOT NAMED,NULL;
FAMILY NOT NAMED,NULL,CUFF.60261.1
         (614 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g018880.1 | breast cancer susceptibility-like protein, put...   816   0.0  
Medtr7g098170.1 | breast cancer susceptibility protein, putative...   345   6e-95
Medtr2g078630.1 | P-loop nucleoside triphosphate hydrolase super...    69   1e-11

>Medtr2g018880.1 | breast cancer susceptibility-like protein, putative
            | HC | chr2:6018865-6024557 | 20130731
          Length = 1006

 Score =  816 bits (2108), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 411/625 (65%), Positives = 470/625 (75%), Gaps = 12/625 (1%)

Query: 2    QEQIGEQQNAIDGVDVDPNMPLKVTMEQSSDNKHKSSNLGKSIRRGKTVCFNTSINPTPQ 61
            Q+ I E     D +++D ++  KV  EQS D KHK+SNL KS +RGK V F TS   TP 
Sbjct: 382  QDHIRELNCLSDEINMDADITSKVIEEQSLDYKHKASNLKKSNKRGKKVSFVTSTESTPP 441

Query: 62   TTCTVSNNSGVLSDGELKMAKISRTSPSKQENEKHCPQELVGRHHLKRSGKQKLDYVQVL 121
              CTVSN  GV + G+ K AK S TS SKQ+NE   P+++ G+  ++RSGKQ+LD V   
Sbjct: 442  IACTVSNILGVQNIGDRKTAKNSYTSESKQDNEMQFPEKIAGKRQVRRSGKQRLDVVDDP 501

Query: 122  AEDLSSTQSPTNEFAGSDSS---LQMYSSEKAXXXXXXXXXXXXXXXXXXXXXXXXXXLK 178
             EDL+S Q+   E AGS SS   LQM S+                              K
Sbjct: 502  PEDLTSVQNQCKELAGSASSSLRLQMDSNRNTVNTRKRKSSLSRKSTPSVTERKSTKKSK 561

Query: 179  LSSDCISKTKTGEEIQPNESILQGPDAGVLSETSKEKHRPLMDERILRRCESHVKKYQCV 238
            LS + IS+TK GEEI+P  S   G D   L+++SKEKH  L D+ +LR+C SH K+YQC 
Sbjct: 562  LSPEFISRTKNGEEIKPTGSTNPGTDVRPLNDSSKEKHCSLTDQPVLRKCVSHAKEYQCA 621

Query: 239  FCLLSEESEASGPMVHYFDGKPVPADYEGGSKVIHCHRSCTEWAPNVYFEDDNAINLEAE 298
            FCL SEESEASGPMVHYFD KPV AD+EGG KVIHCHR+CTEWAPNVYFEDDNAINLEAE
Sbjct: 622  FCLSSEESEASGPMVHYFDEKPVTADFEGGPKVIHCHRNCTEWAPNVYFEDDNAINLEAE 681

Query: 299  ISRSRRIKCSFCGTKGAALGCYEKSCRKSFHVPCAKWTSQCRWDMENFVMLCPLHASSKL 358
            ISRSRRIKC FCG KGAALGC+EKSCR+SFHVPCAKWT +CRWDMENFVMLCPLHA S L
Sbjct: 682  ISRSRRIKCGFCGLKGAALGCFEKSCRRSFHVPCAKWTPECRWDMENFVMLCPLHAPSLL 741

Query: 359  PNESSGSQERSKKGTGEG-KSRGFKHDTKSQTRTAHGSYKKIILCCSALSMQEKDVVSEF 417
            P ESSGSQ  SKK T +  K    KHDT SQ++ AHGS+KKI+LCCSALS+QEK+VVSEF
Sbjct: 742  PCESSGSQHNSKKHTAKKVKICSRKHDTTSQSQIAHGSHKKIVLCCSALSVQEKEVVSEF 801

Query: 418  ERATKVTVLKNWDSSVTHIIAAVDENGACRRTLKVLLGILEGKWILNIDWIKACMKEMEP 477
            ER +KVTVLK WDS VTH+IA+ DENGACRRTLKVLLGILEGKWIL+I+WIKACMKE  P
Sbjct: 802  ERVSKVTVLKTWDSGVTHVIASTDENGACRRTLKVLLGILEGKWILSIEWIKACMKETRP 861

Query: 478  VDEESYEINLDIHGIRDGPRLGRLRVLNKQPKLFDGYKFYFMGDFMPSYKGFLQDIVIAA 537
            VDEE YE+N+DIHGI+DGPRLGRLRV+NKQPKLFDGYKFYFMGDF+PSYKG+LQD+VIAA
Sbjct: 862  VDEERYEVNVDIHGIKDGPRLGRLRVVNKQPKLFDGYKFYFMGDFIPSYKGYLQDLVIAA 921

Query: 538  GGLVLHRKPVLAD--------HPHQTLIIYSLELPNKCNPSEKDTIFSRRRSDAEVLASS 589
            GG+VLHRKPV AD        + H+TLIIYSLELP K NP EKD IFS+RR DAE LA  
Sbjct: 922  GGIVLHRKPVSADQNEILPTMNQHRTLIIYSLELPAKSNPLEKDAIFSQRRCDAEALARP 981

Query: 590  TGSKVASNTWILNSIAACKLQCLAQ 614
            T SKVASNTWILNSIA CKLQ LAQ
Sbjct: 982  TCSKVASNTWILNSIAGCKLQSLAQ 1006


>Medtr7g098170.1 | breast cancer susceptibility protein, putative |
           HC | chr7:39230788-39237133 | 20130731
          Length = 687

 Score =  345 bits (886), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 174/375 (46%), Positives = 233/375 (62%), Gaps = 7/375 (1%)

Query: 237 CVFCLLSEESEASGPMVHYFDGKPVPADYEGGSKVIHCHRSCTEWAPNVYFEDDNAINLE 296
           C FC  S+ SEA+G M+HY  G  V  +      V+H H+ C +WAP VYF  +   NL+
Sbjct: 315 CSFCQSSKISEATGSMLHYASGISVTGEAAMEPNVVHVHKVCIDWAPQVYFVGETVKNLK 374

Query: 297 AEISRSRRIKCSFCGTKGAALGCYEKSCRKSFHVPCAKWTSQCRWDMENFVMLCPLHASS 356
           AE++R  ++KC+ CG KGAALGCY KSCR+++HVPCA   S CRWD  ++++LCP H++ 
Sbjct: 375 AEVARGAKLKCTKCGKKGAALGCYVKSCRRTYHVPCAMDISACRWDHVDYLLLCPSHSNV 434

Query: 357 KLPNESSGSQERSKKGTGEGKSRGFKHDTKSQTRTAHGSYKKIILCCSALSMQEKDVVSE 416
           K PNE S   +++ +      S        +Q     G  KK++ C SALS +EK ++  
Sbjct: 435 KFPNEKSNLDKQATQK--HPVSSHLPSQQSNQLGAVQGDGKKMVFCGSALSNEEKVLLIN 492

Query: 417 FERATKVTVLKNWDSSVTHIIAAVDENGACRRTLKVLLGILEGKWILNIDWIKACMKEME 476
           F      TV K W S VTH+IAA D NGAC RTLKVL  IL G+WIL +DWI+ACMK M 
Sbjct: 493 FASKVGATVSKCWTSDVTHVIAATDANGACSRTLKVLRAILNGQWILKMDWIRACMKAMN 552

Query: 477 PVDEESYEINLDIHGIRDGPRLGRLRVLNKQPKLFDGYKFYFMGDFMPSYKGFLQDIVIA 536
            V+EE YEI+LD  G + GP+ GRLR L  +PKLF G KFYF G++  SYK +L+D+V  
Sbjct: 553 LVEEELYEIDLDNQGCQGGPKAGRLRALANEPKLFSGLKFYFSGEYDSSYKKYLEDLVEG 612

Query: 537 AGGLVLHRKPVL-ADHPHQTLIIYSLELPNKCNPSEKDTIFSRRRSDAEVLASSTGSKVA 595
            GG+VL  K  L        L +Y+L+ P  C   ++ +I   R ++AE L ++T    A
Sbjct: 613 GGGVVLKSKDELEVGRDANLLAVYNLDPPEGCELEDEVSILWHRLTEAENLTANT----A 668

Query: 596 SNTWILNSIAACKLQ 610
            +TWIL SIAACKLQ
Sbjct: 669 GHTWILESIAACKLQ 683


>Medtr2g078630.1 | P-loop nucleoside triphosphate hydrolase
           superfamily protein, putative | HC |
           chr2:32829577-32820356 | 20130731
          Length = 1828

 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 2/93 (2%)

Query: 262 PADYEGGSKVIHCHRSCTEWAPNVYFEDDNAI-NLEAEISRSRRIKCSFCGTKGAALGCY 320
           P +   G   I  H++C  W+P VYF     + N+ A + R R +KC+ CG +GA +GC 
Sbjct: 415 PINDRYGIAGIWVHQNCAVWSPEVYFAGLGCLKNVRAALCRGRALKCTRCGRRGATIGCR 474

Query: 321 EKSCRKSFHVPCAKWTSQCRWDMENFVMLCPLH 353
              C K++H+ CA+  + C +D   F++ C  H
Sbjct: 475 VDRCPKTYHLACAR-ANGCIFDHRKFLIACTDH 506