Miyakogusa Predicted Gene

Lj6g3v1946320.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1946320.1 tr|I3WTA4|I3WTA4_NICAT Jasmonate ZIM domain
protein f OS=Nicotiana attenuata PE=2 SV=1,44.37,3e-19,TIFY,Tify;
seg,NULL; no description,Tify; tify,Tify; CCT_2,CO/COL/TOC1, conserved
site,CUFF.60244.1
         (136 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g019190.1 | jasmonate zim-domain protein | HC | chr2:62026...   149   5e-37
Medtr8g107300.1 | jasmonate zim-domain protein | HC | chr8:45337...   121   2e-28
Medtr8g107300.2 | jasmonate zim-domain protein | HC | chr8:45337...   108   1e-24

>Medtr2g019190.1 | jasmonate zim-domain protein | HC |
           chr2:6202674-6199802 | 20130731
          Length = 134

 Score =  149 bits (377), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 87/143 (60%), Positives = 102/143 (71%), Gaps = 18/143 (12%)

Query: 1   MRRNCNLELRLFPXXXXXXXXXXXXPMV------EESSKSPMQNYFQQQENQRPLTIFYE 54
           MRRNCNLEL LFP            PMV      + +  +PMQN  Q      PLTIFY+
Sbjct: 1   MRRNCNLELCLFPPYNSSNHQNH--PMVEEEEEEDSNESTPMQNQHQ------PLTIFYD 52

Query: 55  GKICVADVTEHQAKSILMLAHK-KVEEEIRMRTPTGAEPSTP-TIVQSPHHVHSPGTGLS 112
           GK+CV DVTE QAKSILMLA++ KV+E++   TP G+EPSTP TIVQSPH ++SPG GLS
Sbjct: 53  GKMCVTDVTELQAKSILMLANRIKVQEKV--MTPIGSEPSTPTTIVQSPHQLYSPGPGLS 110

Query: 113 MKRSLQQFLQKRKTRVQEASPYH 135
           MKRSLQ+FLQKRK RVQEASPY+
Sbjct: 111 MKRSLQRFLQKRKNRVQEASPYY 133


>Medtr8g107300.1 | jasmonate zim-domain protein | HC |
           chr8:45337723-45336413 | 20130731
          Length = 118

 Score =  121 bits (304), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 79/137 (57%), Positives = 94/137 (68%), Gaps = 24/137 (17%)

Query: 1   MRRNC-NLELRLFPXXXXXXXXXXXXPM-VEESSKSPMQNYFQQQENQRPLTIFYEGKIC 58
           MRRNC NLEL LFP             + VEE  +SPMQN       Q+PLTIFY+GK+C
Sbjct: 1   MRRNCSNLELCLFPLYDSGNHNNSNHHIGVEE--ESPMQN------QQQPLTIFYDGKMC 52

Query: 59  VADVTEHQAKSILMLAHK-KVEEEIRMRTPTGAEPSTPTIVQSPHHVHSPGTGLSMKRSL 117
           + DVTE QAKSILMLA+K K++E++  +TP G+EP+TP  VQS         GLSMKRSL
Sbjct: 53  LTDVTEFQAKSILMLANKIKLQEKV--KTPRGSEPTTP--VQS---------GLSMKRSL 99

Query: 118 QQFLQKRKTRVQEASPY 134
           Q+FLQKRK RVQEASPY
Sbjct: 100 QRFLQKRKNRVQEASPY 116


>Medtr8g107300.2 | jasmonate zim-domain protein | HC |
           chr8:45337393-45336413 | 20130731
          Length = 83

 Score =  108 bits (271), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 60/93 (64%), Positives = 73/93 (78%), Gaps = 14/93 (15%)

Query: 43  QENQRPLTIFYEGKICVADVTEHQAKSILMLAHK-KVEEEIRMRTPTGAEPSTPTIVQSP 101
           Q  Q+PLTIFY+GK+C+ DVTE QAKSILMLA+K K++E++  +TP G+EP+TP  VQS 
Sbjct: 2   QNQQQPLTIFYDGKMCLTDVTEFQAKSILMLANKIKLQEKV--KTPRGSEPTTP--VQS- 56

Query: 102 HHVHSPGTGLSMKRSLQQFLQKRKTRVQEASPY 134
                   GLSMKRSLQ+FLQKRK RVQEASPY
Sbjct: 57  --------GLSMKRSLQRFLQKRKNRVQEASPY 81