Miyakogusa Predicted Gene

Lj6g3v1946300.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1946300.1 Non Characterized Hit- tr|Q6N6P4|Q6N6P4_RHOPA
Putative uncharacterized protein (Precursor)
OS=Rhodop,32.18,8e-19,seg,NULL; DUF1365,Protein of unknown function
DUF1365,CUFF.60246.1
         (316 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g019220.1 | DUF1365 family protein | HC | chr2:6220253-621...   459   e-129

>Medtr2g019220.1 | DUF1365 family protein | HC |
           chr2:6220253-6216086 | 20130731
          Length = 311

 Score =  459 bits (1181), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 228/293 (77%), Positives = 249/293 (84%), Gaps = 7/293 (2%)

Query: 25  PFQALLRRLGTSRAASSSTNGGAEPISLYEGTVWHQRRHPVIHSFKYQVRYALIDLDRES 84
           PF ALLRRL +SRAASSS+N G EP+SLYEGTV+HQRRHPV HSF+Y VRYALIDLDR  
Sbjct: 25  PFHALLRRLVSSRAASSSSNDGDEPVSLYEGTVYHQRRHPVHHSFQYNVRYALIDLDRAL 84

Query: 85  HAPPGHISSDEARQLTDTDGPILLLTIPPSVGYEQNPLSVYYCYDVEGSSTRLKKCIAEV 144
           HAPP H+S DEARQ+TDT+GPILLLTIP SVGYEQNPLSVYYCYDVE S TRLKKCIAEV
Sbjct: 85  HAPPNHLSPDEARQITDTNGPILLLTIPASVGYEQNPLSVYYCYDVEDSDTRLKKCIAEV 144

Query: 145 TNTPWGERVSFIFNPHSDLVAKALHVSPFMDMLGSWNIKANDPGENLSISISVHHPEHGN 204
           TNTPW ERV+FIFNPHSDLVAKALHVSPFMDMLGSWNIKA+DPGENLSISISVHHPE GN
Sbjct: 145 TNTPWAERVTFIFNPHSDLVAKALHVSPFMDMLGSWNIKASDPGENLSISISVHHPEFGN 204

Query: 205 YFTXXXXXXXXXXXXEPDHAVFFWLMPHKVAVWIYWHAIKLWWKNVRFVQHPRYATPTYK 264
           YFT              DHAVFFWLMPHKVAVWIYWHAIKLWW+NV+F+QHPRY  P Y+
Sbjct: 205 YFTASLKAKRLCPTSASDHAVFFWLMPHKVAVWIYWHAIKLWWQNVKFIQHPRYNIPAYR 264

Query: 265 EEALIRDKKLQCCGFSDDTRHLQEGGSDQVCLA-EVSPRNRRFKWTDAEWPWS 316
           ++ALIRD+KLQCCGFS       + GS+Q CLA E SPR+R FKWTDA+WPWS
Sbjct: 265 DDALIRDRKLQCCGFS------AQRGSNQDCLADEASPRHRWFKWTDAKWPWS 311