Miyakogusa Predicted Gene

Lj6g3v1946290.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1946290.1 Non Characterized Hit- tr|I1KRU1|I1KRU1_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,86.45,0,SUBFAMILY NOT
NAMED,NULL; DEHYDROGENASE RELATED,NULL; seg,NULL; Thiamin
diphosphate-binding fold (TH,CUFF.60241.1
         (399 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g076630.1 | pyruvate dehydrogenase E1 beta subunit | HC | ...   611   e-175
Medtr7g005380.2 | pyruvate dehydrogenase E1 beta subunit | HC | ...   239   3e-63
Medtr7g005380.1 | pyruvate dehydrogenase E1 beta subunit | HC | ...   239   3e-63
Medtr4g021470.1 | branched chain alpha-keto acid dehydrogenase E...   195   6e-50

>Medtr3g076630.1 | pyruvate dehydrogenase E1 beta subunit | HC |
           chr3:34442945-34446106 | 20130731
          Length = 403

 Score =  611 bits (1575), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 315/408 (77%), Positives = 331/408 (81%), Gaps = 14/408 (3%)

Query: 1   MATLFQGVGAA-TAFSASNKLHLPSRGSLSESKGSIFVVRS-DAWMNNLL----NLEARQ 54
           MATLFQ +GAA T FS S       R        SIFVVRS DA +N ++        + 
Sbjct: 1   MATLFQALGAALTPFSPSTSFQSKERKC-----SSIFVVRSSDAKVNQVVLKSGGATRKA 55

Query: 55  PQRLITSAVATKADSSAST---KTGHXXXXXXXXXXXXXXXXXRDPRVCVMGEDVGDYGG 111
            Q LI +AVAT+  SS ++   K GH                 RDP VCVMGEDVG YGG
Sbjct: 56  GQLLIPNAVATQGSSSVASAASKPGHELLLFEALREGLEEEMERDPCVCVMGEDVGHYGG 115

Query: 112 SYKVTKGLAPKFGDLRVLDTPIAENAFTGMGIGAAMTGLRPIIEGMNMGFLLLAFNQISN 171
           SYKVT+ LA KFGDLRVLDTPIAENAFTGMGIGAAMTGLRPIIEGMNMGFLLLAFNQISN
Sbjct: 116 SYKVTRNLAEKFGDLRVLDTPIAENAFTGMGIGAAMTGLRPIIEGMNMGFLLLAFNQISN 175

Query: 172 NCGMLHYTSGGQFKXXXXXXXXXXXXXQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKG 231
           NCGMLHYTSGGQFK             QLGAEHSQRLESYFQSIPGIQMVACSTPYNAKG
Sbjct: 176 NCGMLHYTSGGQFKIPVVIRGPGGVGRQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKG 235

Query: 232 LMKAAIRSENPVILFEHVLLYNLKERIPDEEYVLSLEEAEMVRPGEHITILTYSRMRYHV 291
           LMKAAIRS+NPVILFEHVLLYNLKERIPDEEYVLSLEEAEMVRPGEH+TILTYSRMRYHV
Sbjct: 236 LMKAAIRSDNPVILFEHVLLYNLKERIPDEEYVLSLEEAEMVRPGEHVTILTYSRMRYHV 295

Query: 292 MQAAKTLVNKGYDPEVIDIRSLKPFDLHTIGNSVKKTHRVLIVEECMRTGGIGASLTAAI 351
           MQAAKTLVNKGYDPEVIDIRSLKPFDLHTIGNS+KKTHRVLIVEECMRTGGIGASLTAAI
Sbjct: 296 MQAAKTLVNKGYDPEVIDIRSLKPFDLHTIGNSIKKTHRVLIVEECMRTGGIGASLTAAI 355

Query: 352 TENFNDYLDAPVVCLSSQDVPTPYTGPLEEWTVVQPAQIVTAVEQLCQ 399
           TENF+DYLDAP++CLSSQDVPTPY G LEEWTVVQPAQIVTAVEQLCQ
Sbjct: 356 TENFHDYLDAPIICLSSQDVPTPYAGTLEEWTVVQPAQIVTAVEQLCQ 403


>Medtr7g005380.2 | pyruvate dehydrogenase E1 beta subunit | HC |
           chr7:85481-92086 | 20130731
          Length = 361

 Score =  239 bits (610), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 123/308 (39%), Positives = 186/308 (60%), Gaps = 4/308 (1%)

Query: 96  DPRVCVMGEDVGDYGGSYKVTKGLAPKFGDLRVLDTPIAENAFTGMGIGAAMTGLRPIIE 155
           DP+V +MGE+VG+Y G+YK++KGL  K+G  RVLDTPI E  FTG+G+GAA  GL+P++E
Sbjct: 45  DPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVE 104

Query: 156 GMNMGFLLLAFNQISNNCGMLHYTSGGQFKXXXXXXXXXXXXXQLGAEHSQRLESYFQSI 215
            M   F + A + I N+    +Y S GQ                +GA+HS    S++ S 
Sbjct: 105 FMTFNFSMQAIDHIINSAAKSNYMSAGQINVPIVFRGPNGAAAGVGAQHSHCYASWYGSC 164

Query: 216 PGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYN----LKERIPDEEYVLSLEEAE 271
           PG++++A  +  +A+GL+KAAIR  +PV+  E+ LLY     +   + D  + L + +A+
Sbjct: 165 PGLKVLAPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAK 224

Query: 272 MVRPGEHITILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLHTIGNSVKKTHRV 331
           + R G+ +TI  +S+M    ++AA+TL  +G   EVI++RS++P D  TI  SV+KT+R+
Sbjct: 225 IEREGKDVTITAFSKMVGFALKAAETLEKEGISAEVINLRSIRPLDRATINASVRKTNRL 284

Query: 332 LIVEECMRTGGIGASLTAAITENFNDYLDAPVVCLSSQDVPTPYTGPLEEWTVVQPAQIV 391
           + VEE     G+GA + A++ E    YLDAPV  ++  DVP PY   LE   V Q   IV
Sbjct: 285 VTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGADVPMPYAANLERLAVPQIEDIV 344

Query: 392 TAVEQLCQ 399
            A ++ C 
Sbjct: 345 RAAKRACH 352


>Medtr7g005380.1 | pyruvate dehydrogenase E1 beta subunit | HC |
           chr7:86084-92086 | 20130731
          Length = 361

 Score =  239 bits (610), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 123/308 (39%), Positives = 186/308 (60%), Gaps = 4/308 (1%)

Query: 96  DPRVCVMGEDVGDYGGSYKVTKGLAPKFGDLRVLDTPIAENAFTGMGIGAAMTGLRPIIE 155
           DP+V +MGE+VG+Y G+YK++KGL  K+G  RVLDTPI E  FTG+G+GAA  GL+P++E
Sbjct: 45  DPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVE 104

Query: 156 GMNMGFLLLAFNQISNNCGMLHYTSGGQFKXXXXXXXXXXXXXQLGAEHSQRLESYFQSI 215
            M   F + A + I N+    +Y S GQ                +GA+HS    S++ S 
Sbjct: 105 FMTFNFSMQAIDHIINSAAKSNYMSAGQINVPIVFRGPNGAAAGVGAQHSHCYASWYGSC 164

Query: 216 PGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYN----LKERIPDEEYVLSLEEAE 271
           PG++++A  +  +A+GL+KAAIR  +PV+  E+ LLY     +   + D  + L + +A+
Sbjct: 165 PGLKVLAPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAK 224

Query: 272 MVRPGEHITILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLHTIGNSVKKTHRV 331
           + R G+ +TI  +S+M    ++AA+TL  +G   EVI++RS++P D  TI  SV+KT+R+
Sbjct: 225 IEREGKDVTITAFSKMVGFALKAAETLEKEGISAEVINLRSIRPLDRATINASVRKTNRL 284

Query: 332 LIVEECMRTGGIGASLTAAITENFNDYLDAPVVCLSSQDVPTPYTGPLEEWTVVQPAQIV 391
           + VEE     G+GA + A++ E    YLDAPV  ++  DVP PY   LE   V Q   IV
Sbjct: 285 VTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGADVPMPYAANLERLAVPQIEDIV 344

Query: 392 TAVEQLCQ 399
            A ++ C 
Sbjct: 345 RAAKRACH 352


>Medtr4g021470.1 | branched chain alpha-keto acid dehydrogenase E1
           beta subunit | HC | chr4:6990880-6984927 | 20130731
          Length = 358

 Score =  195 bits (496), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 111/281 (39%), Positives = 153/281 (54%), Gaps = 3/281 (1%)

Query: 96  DPRVCVMGEDVGDYGGSYKVTKGLAPKFGDLRVLDTPIAENAFTGMGIGAAMTGLRPIIE 155
           DPR  V GEDVG +GG ++ T GLA +FG  RV +TP+ E    G GIG A  G R I E
Sbjct: 55  DPRAYVFGEDVG-FGGVFRCTTGLADRFGKKRVFNTPLCEQGIVGFGIGLAAMGNRAIAE 113

Query: 156 GMNMGFLLLAFNQISNNCGMLHYTSGGQFKXXXXXXXXXXXXXQLGAE-HSQRLESYFQS 214
                ++  AF+QI N      Y SG QF                G   HSQ  E++F  
Sbjct: 114 IQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTIRTPYGAVGHGGHYHSQSPEAFFCH 173

Query: 215 IPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLK-ERIPDEEYVLSLEEAEMV 273
           +PGI++V   +P  AKGL+ + IR  NP++ FE   LY L  E +P+ +Y+L L EAE++
Sbjct: 174 VPGIKVVIPRSPKEAKGLLLSCIRDPNPIVFFEPKWLYRLAVEEVPEGDYMLPLSEAEVI 233

Query: 274 RPGEHITILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLHTIGNSVKKTHRVLI 333
           R G  IT++ +      + QA      +G   E+ID+++L P+D  T+  SVKKT R+LI
Sbjct: 234 REGSDITLVGWGAQLSIMEQACVDAEKEGISCELIDLKTLIPWDKETVEASVKKTGRLLI 293

Query: 334 VEECMRTGGIGASLTAAITENFNDYLDAPVVCLSSQDVPTP 374
             E   TGG GA ++A+I E     L+APV  +   D P P
Sbjct: 294 SHEAPVTGGFGAEISASILERCFSRLEAPVARVCGLDTPFP 334