Miyakogusa Predicted Gene
- Lj6g3v1918310.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1918310.1 Non Characterized Hit- tr|G7KQZ0|G7KQZ0_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,35,9e-19,INTEGRAL MEMBRANE FAMILY PROTEIN,NULL; NITRATE,
FROMATE, IRON DEHYDROGENASE,NULL; seg,NULL; DUF588,U,CUFF.60192.1
(270 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g118800.1 | plant integral membrane protein | HC | chr4:49... 196 2e-50
Medtr7g108130.1 | plant integral membrane protein | HC | chr7:43... 81 9e-16
Medtr2g020060.1 | plant integral membrane protein | HC | chr2:66... 73 2e-13
Medtr4g118810.1 | plant integral membrane protein | HC | chr4:49... 72 6e-13
Medtr8g089300.1 | CASP POPTRDRAFT-like protein | HC | chr8:37100... 60 2e-09
Medtr0097s0070.1 | CASP POPTRDRAFT-like protein | HC | scaffold0... 60 2e-09
Medtr4g081880.1 | casparian strip membrane protein | HC | chr4:3... 53 2e-07
Medtr2g026530.1 | CASP POPTRDRAFT-like protein | HC | chr2:95933... 52 6e-07
Medtr2g026530.2 | CASP POPTRDRAFT-like protein | HC | chr2:95933... 52 6e-07
Medtr5g041900.1 | casparian strip membrane protein | HC | chr5:1... 51 9e-07
Medtr0004s0210.1 | CASP POPTRDRAFT-like protein | HC | scaffold0... 50 2e-06
Medtr7g011090.1 | casparian strip membrane protein | HC | chr7:2... 50 3e-06
>Medtr4g118800.1 | plant integral membrane protein | HC |
chr4:49224515-49222579 | 20130731
Length = 187
Score = 196 bits (498), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 103/193 (53%), Positives = 133/193 (68%), Gaps = 6/193 (3%)
Query: 78 MASTESDPEHKSSSTXXXXXAGGVDYFKFDVILRFXXXXXXXXXXXXITSSDQTELVLFQ 137
MAST DPE+KSSST + GVD+ KFD+ILRF + + +QT +
Sbjct: 1 MAST-GDPEYKSSSTPAPASSVGVDHSKFDLILRFLLFAASVASVVVMVTGNQTVYL--- 56
Query: 138 GRPVLQPAKFKYSPAFIYFVVAFSVSGLYALISALASISVIQKPEFKLKFLLHFIFWDAL 197
PV +PAKF+YSPAF+YFV AFSV+GLY++I+ S+S I+KP K K LLH IFWDA+
Sbjct: 57 --PVPRPAKFRYSPAFVYFVAAFSVAGLYSIITTFISLSAIRKPNLKTKLLLHLIFWDAV 114
Query: 198 ILGIXXXXXXXXXXVAYIGLKGNSHVGWSKVCNVYDKFCRHLGGSIAVALFGSIVTVLLV 257
+LGI VAY+GLKGN H W K+C++YDKFCRH+G S+ V LFGSIVT+LL+
Sbjct: 115 MLGILASATGTAGSVAYLGLKGNKHTDWHKICHIYDKFCRHIGASVGVGLFGSIVTLLLI 174
Query: 258 CLSAYTIHSRVLK 270
+SA++IHSRV K
Sbjct: 175 WISAHSIHSRVPK 187
>Medtr7g108130.1 | plant integral membrane protein | HC |
chr7:43972040-43974109 | 20130731
Length = 191
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 79/160 (49%), Gaps = 2/160 (1%)
Query: 106 FDVILRFXXXXXXXXXXXXITSSDQTELVLFQGRPVLQPAKFKYSPAFIYFVVAFSVSGL 165
DV+LR + +T+++ + AK++Y A ++F+V ++
Sbjct: 29 LDVLLRVLGFLLTLTATIIVGFGKETKVISYASLQFKVTAKWEYMSAIVFFLVTNAIGCS 88
Query: 166 YALISALASISVIQKPEFKLKFLLHFIFWDALILGIXXXXXXXXXXVAYIGLKGNSHVGW 225
YA IS + +S I + LL D +I+ + V +G KGNSHV W
Sbjct: 89 YAAISMV--VSTIARTSGNKTALLMITLLDLVIMALLFSANGAAGAVGVLGQKGNSHVQW 146
Query: 226 SKVCNVYDKFCRHLGGSIAVALFGSIVTVLLVCLSAYTIH 265
KVCNV+D +CRH+ ++ +++ GS V +LLV S + +H
Sbjct: 147 MKVCNVFDAYCRHMTVALVLSIIGSTVFLLLVAHSLFKLH 186
>Medtr2g020060.1 | plant integral membrane protein | HC |
chr2:6650859-6647324 | 20130731
Length = 189
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 9/167 (5%)
Query: 107 DVILRFXXXXXXXXXXXXITSSDQTELVLFQGRPVLQP------AKFKYSPAFIYFVVAF 160
++LR + + QT +V + L P AK++Y A++YFVVA
Sbjct: 24 SMVLRLCALVLTLTAAVVLVADKQTTVVPVKISDSLPPLDVPVTAKWQYVSAYVYFVVAN 83
Query: 161 SVSGLYALISALASISVIQKPEFKLKFLLHFIFWDALILGIXXXXXXXXXXVAYIGLKGN 220
++ YA +S + +++ K + + + DA+++ + + + KGN
Sbjct: 84 FIAFAYATLSFVIALANGHKSKLLVTLVTLL---DAIMVALLFSGNGAAWAIGVLAEKGN 140
Query: 221 SHVGWSKVCNVYDKFCRHLGGSIAVALFGSIVTVLLVCLSAYTIHSR 267
SHV W+KVC+V+DKFC + ++L GSIV + LV L A +H R
Sbjct: 141 SHVMWNKVCHVFDKFCNQAAAACLISLLGSIVFLSLVMLPALRLHRR 187
>Medtr4g118810.1 | plant integral membrane protein | HC |
chr4:49234116-49235835 | 20130731
Length = 200
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 73/143 (51%), Gaps = 8/143 (5%)
Query: 107 DVILRFXXXXXXXXXXXXITSSDQTELVLFQGRPVLQP------AKFKYSPAFIYFVVAF 160
+++LRF + + QT +V + L P AK+ Y AF+YF+VA
Sbjct: 34 ELVLRFLGFVLTLAAAIVVGTDKQTTIVPIKVVDSLPPLNVAVSAKWHYLSAFVYFLVAN 93
Query: 161 SVSGLYALISALASISVIQKPEFKLKFLLHFIFWDALILGIXXXXXXXXXXVAYIGLKGN 220
+++ Y IS L ++++ + + K+ + +DAL++ + + +G +GN
Sbjct: 94 AIACTYGAISML--LTLLNRGKSKVFWGTLITIFDALMVALLFSGNGAATAIGVLGYQGN 151
Query: 221 SHVGWSKVCNVYDKFCRHLGGSI 243
SHV W KVCNV+DK+C + SI
Sbjct: 152 SHVRWKKVCNVFDKYCHQVAASI 174
>Medtr8g089300.1 | CASP POPTRDRAFT-like protein | HC |
chr8:37100964-37099766 | 20130731
Length = 194
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 60/109 (55%), Gaps = 9/109 (8%)
Query: 140 PVLQP--AKFKYSPAFIYFVVAFSVSGLYALISALASISV-IQKPEFKLKFL-LHFI-FW 194
P+ P AKF+++PAF+YFVV + L+ L+ I++ I P+F K L L I +
Sbjct: 63 PITVPLTAKFQHTPAFVYFVVPNGIVSLHNLVM----IAMYILGPKFHNKGLQLALIAVF 118
Query: 195 DALILGIXXXXXXXXXXVAYIGLKGNSHVGWSKVCNVYDKFCRHLGGSI 243
D + L + ++ +G GNSH W+K+C+ ++ +C GGS+
Sbjct: 119 DTMALALASSGDGAATAMSELGRNGNSHAKWNKICDKFESYCNRGGGSL 167
>Medtr0097s0070.1 | CASP POPTRDRAFT-like protein | HC |
scaffold0097:39509-37693 | 20130731
Length = 201
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 64/118 (54%), Gaps = 5/118 (4%)
Query: 145 AKFKYSPAFIYFVVAFSVSGLYALISALASISVIQKPEFKLKFL-LHFI-FWDALILGIX 202
AKF +PAF++FV+A + L+ L+ + ++ ++ P++ K L L I D L + +
Sbjct: 71 AKFNQTPAFVFFVIANGNASLHNLV--MIALDILG-PQYDYKGLRLALIAILDMLTMALA 127
Query: 203 XXXXXXXXXVAYIGLKGNSHVGWSKVCNVYDKFCRHLGGSIAVALFGSIVTVLLVCLS 260
++ +G GNSH W K+C+ ++ +C GG++ + G I+ +++ +S
Sbjct: 128 SAGDGAATFMSALGRNGNSHARWDKICDKFESYCNRGGGALIASFIGFILLLIITVMS 185
>Medtr4g081880.1 | casparian strip membrane protein | HC |
chr4:31869526-31871135 | 20130731
Length = 189
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 79/188 (42%), Gaps = 7/188 (3%)
Query: 78 MASTESDPEHKSSSTXXXXXAGGVDYFKFDVILRFXXXXXXXXXXXXITSSDQTELVLFQ 137
+++ ES K +S+ G+ D ILR + ++ QT + F
Sbjct: 3 VSTIESGEISKGASSPRKGMKRGLSIM--DFILRIFAAMSTLGSALSMGTAKQT--MPFA 58
Query: 138 GRPVLQPAKFKYSPAFIYFVVAFS-VSGLYALISALASISVIQKPEFKLKFLLHFIFWDA 196
R V F P F++FV A S V G AL L+ +++ K + LL +F D
Sbjct: 59 TRFVRFKVSFHDLPTFLFFVTANSIVCGYLALSLVLSFFHIVRTISVKSRILL--VFLDT 116
Query: 197 LILGIXXXXXXXXXXVAYIGLKGNSHVGWSKVCNVYDKFCRHLGGSIAVALFGSIVTVLL 256
++ G+ + Y+ GN W C Y+ FC + GS+ + ++ ++L
Sbjct: 117 VMFGLLTSGASAAAAIVYVAHYGNPSANWFPFCQQYNSFCGRISGSLVGSFIAVVIFMIL 176
Query: 257 VCLSAYTI 264
+ +S +I
Sbjct: 177 ILMSGISI 184
>Medtr2g026530.1 | CASP POPTRDRAFT-like protein | HC |
chr2:9593399-9595933 | 20130731
Length = 201
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 72/160 (45%), Gaps = 6/160 (3%)
Query: 107 DVILRFXXXXXXXXXXXXITSSDQTELVLFQGRPVLQPAKFKYSPAFIYFVVAFSVSGLY 166
+++LRF I + Q + + + AKF A ++ VVA +++ Y
Sbjct: 32 ELVLRFVNLGLGVLAVVLIVTDSQVR----EFFTIQKKAKFTDMKALVFLVVANAIAAGY 87
Query: 167 ALISALASI-SVIQKPEFKLKFLLHFIF-WDALILGIXXXXXXXXXXVAYIGLKGNSHVG 224
+LI L + S+I+ K L IF D ++ I A G +
Sbjct: 88 SLIQGLRCVVSMIKGSVLFNKPLAWAIFSCDQVMAYITVAAVSAAAQSAVFAKMGQEQLQ 147
Query: 225 WSKVCNVYDKFCRHLGGSIAVALFGSIVTVLLVCLSAYTI 264
W K+CN+Y KFC +G +A A S+ V++ C+SA+++
Sbjct: 148 WMKICNMYGKFCNQVGEGLASAFLVSLSMVVVSCISAFSL 187
>Medtr2g026530.2 | CASP POPTRDRAFT-like protein | HC |
chr2:9593399-9595933 | 20130731
Length = 181
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 72/160 (45%), Gaps = 6/160 (3%)
Query: 107 DVILRFXXXXXXXXXXXXITSSDQTELVLFQGRPVLQPAKFKYSPAFIYFVVAFSVSGLY 166
+++LRF I + Q + + + AKF A ++ VVA +++ Y
Sbjct: 12 ELVLRFVNLGLGVLAVVLIVTDSQVR----EFFTIQKKAKFTDMKALVFLVVANAIAAGY 67
Query: 167 ALISALASI-SVIQKPEFKLKFLLHFIF-WDALILGIXXXXXXXXXXVAYIGLKGNSHVG 224
+LI L + S+I+ K L IF D ++ I A G +
Sbjct: 68 SLIQGLRCVVSMIKGSVLFNKPLAWAIFSCDQVMAYITVAAVSAAAQSAVFAKMGQEQLQ 127
Query: 225 WSKVCNVYDKFCRHLGGSIAVALFGSIVTVLLVCLSAYTI 264
W K+CN+Y KFC +G +A A S+ V++ C+SA+++
Sbjct: 128 WMKICNMYGKFCNQVGEGLASAFLVSLSMVVVSCISAFSL 167
>Medtr5g041900.1 | casparian strip membrane protein | HC |
chr5:18399261-18401571 | 20130731
Length = 186
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 73/157 (46%), Gaps = 12/157 (7%)
Query: 106 FDVILRFXXXXXXXXXXXXITSSDQTELVLFQGRPVLQPAKFKYSPAFIYFVVAFS-VSG 164
D ILR + ++D E + F V A++ P+F++FV+A S V G
Sbjct: 28 MDFILRIIAGVATLASAVAMGTTD--ERLPFATSFVQFRAEYDDLPSFVFFVLANSIVCG 85
Query: 165 LYALISALASISVIQKPEFKLKFLLHFIFWDALILGIXXXXXXXXXXVAYIGLKGNSHVG 224
AL L+ + +++ K + LL I D +++G+ + YI GN+
Sbjct: 86 YLALSLILSILHIVRSTAVKSRILL--IVLDMVMMGLLAAAASAAASIVYIAHYGNTQAN 143
Query: 225 WSKVCNVYDKFCRHLGGS-----IAVALFGSIVTVLL 256
W +C Y+ FC + GS IAVALF I+ +LL
Sbjct: 144 WFPICQQYNSFCERISGSLIGSYIAVALF--IIIILL 178
>Medtr0004s0210.1 | CASP POPTRDRAFT-like protein | HC |
scaffold0004:83573-81269 | 20130731
Length = 163
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 8/120 (6%)
Query: 145 AKFKYSPAFIYFVVAFSVSGLYALISALASISVIQKPEFKLKFLLHFIFWDALILGIXXX 204
AK+ SPAF YFV+A S+ +Y V+ P L + L + D ++ +
Sbjct: 43 AKYTNSPAFKYFVIANSIVTVYGFF-------VLFLPAESLLWRL-VVAMDMVLTMLLIS 94
Query: 205 XXXXXXXVAYIGLKGNSHVGWSKVCNVYDKFCRHLGGSIAVALFGSIVTVLLVCLSAYTI 264
+A + GN++ W +C KFC H+ G++ + G I+ ++L+ S +T+
Sbjct: 95 SISAALAIAQVAKNGNNYAAWLPICGSVPKFCNHMTGALVASFIGVIIYLILLLHSIHTV 154
>Medtr7g011090.1 | casparian strip membrane protein | HC |
chr7:2905231-2907425 | 20130731
Length = 186
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 72/172 (41%), Gaps = 25/172 (14%)
Query: 107 DVILRFXXXXXXXXXXXXITSSDQ-----TELVLFQGRPVLQPAKFKYSPAFIYFVVAFS 161
D ILR + ++D+ T+ V F+ A + P +FVVA +
Sbjct: 29 DFILRLIAIVATLASAIAMGTTDESLPFFTQFVRFR-------ANYDDLPTLRFFVVASA 81
Query: 162 -VSGLYALISALASISVIQKPEFKLKFLLHFIFWDALILGIXXXXXXXXXXVAYIGLKGN 220
VSG L L+ + +I+ + + FI D ++LG+ + Y+ KGN
Sbjct: 82 IVSGYLILSLPLSILHIIRSSAGMTRVI--FIILDTVMLGLLTAGSSAAASIVYLAHKGN 139
Query: 221 SHVGWSKVCNVYDKFCRHLGGS-----IAVALFGSIVTVLLVCLSAYTIHSR 267
W C Y+ FC + GS IA+ LF ++L+ LSA + R
Sbjct: 140 RKANWFAFCQQYNSFCERISGSLIGSFIAIPLF-----IMLILLSALVLSRR 186