Miyakogusa Predicted Gene

Lj6g3v1915860.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1915860.1 tr|B6UIB8|B6UIB8_MAIZE TPD1 OS=Zea mays PE=2
SV=1,42.2,2e-19, ,gene.g66954.t1.1
         (168 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g034150.1 | hypothetical protein | HC | chr2:13046877-1304...   262   9e-71
Medtr4g122090.1 | hypothetical protein | HC | chr4:50419270-5041...   245   1e-65
Medtr2g025290.1 | hypothetical protein | LC | chr2:9008819-90133...   147   5e-36
Medtr3g098960.1 | tapetum determinant protein | HC | chr3:453428...   120   4e-28
Medtr3g098960.3 | tapetum determinant protein | HC | chr3:453430...   120   4e-28
Medtr3g098960.2 | tapetum determinant protein | HC | chr3:453428...   120   5e-28
Medtr5g096130.1 | transmembrane protein, putative | LC | chr5:42...   107   5e-24
Medtr8g096400.1 | tapetum determinant protein | HC | chr8:404324...   100   1e-21
Medtr2g025320.1 | hypothetical protein | LC | chr2:9020533-90213...    90   8e-19
Medtr2g025350.1 | transmembrane protein, putative | LC | chr2:90...    81   4e-16
Medtr2g438190.1 | beta-1,3-N-acetylglucosaminyltransferase famil...    50   8e-07
Medtr2g025210.1 | transmembrane protein, putative | LC | chr2:89...    49   2e-06

>Medtr2g034150.1 | hypothetical protein | HC |
           chr2:13046877-13045984 | 20130731
          Length = 161

 Score =  262 bits (670), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 125/161 (77%), Positives = 139/161 (86%), Gaps = 1/161 (0%)

Query: 8   SCHLFFLCFIVPLLVFSDVELPQGPKTHILHAFHEGRNGSITVSVKAEEHAHSTSSKIWL 67
           S +LFFL   +PL+VF D E+P G  T I H+FHE +NGS+TVS K E HAH T  K W 
Sbjct: 2   SFYLFFLFITMPLIVFCDFEMPSGSSTQIFHSFHEDKNGSLTVSEKVE-HAHYTPRKFWF 60

Query: 68  HGSCTKRDISISQSRGSTSGIPQYIVQIVNTCVSGCAPHDIHLHCGWFASARIINPRVFK 127
           HGSCTKRDISISQS+GSTSGIPQYIVQIVNTCVSGCAP+DIHLHCGWFASARIINP++FK
Sbjct: 61  HGSCTKRDISISQSKGSTSGIPQYIVQIVNTCVSGCAPYDIHLHCGWFASARIINPKLFK 120

Query: 128 RLSYDDCLVNGGNPLESSQIIRFTYSNSFMYPLAFKSAQFC 168
           RLSYDDCLV+GG PL S+QIIRFTYSNSFMYPLAFKSA+FC
Sbjct: 121 RLSYDDCLVHGGKPLTSNQIIRFTYSNSFMYPLAFKSARFC 161


>Medtr4g122090.1 | hypothetical protein | HC |
           chr4:50419270-50419980 | 20130731
          Length = 165

 Score =  245 bits (626), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 121/167 (72%), Positives = 140/167 (83%), Gaps = 3/167 (1%)

Query: 3   MTFTKSCHLFFLCFIVPLLVFSDVELPQGPKTHILHAFHEGRNGSITVSVKAEEHAHSTS 62
           MT      LFFLCFI PL   S+VE+  GP T ILH+F+E RNGSIT+SVKAE HAHSTS
Sbjct: 1   MTIINYTPLFFLCFITPL-ALSNVEIHSGPSTQILHSFNEDRNGSITLSVKAE-HAHSTS 58

Query: 63  SKIWLHGSCTKRDISISQSRGSTSGIPQYIVQIVNTCVSG-CAPHDIHLHCGWFASARII 121
           +K   HGSCT +DISISQSR + +GIP+Y+VQIVNTCVS  CAP++IHLHCGWFASARII
Sbjct: 59  TKFSWHGSCTNKDISISQSRETLTGIPKYVVQIVNTCVSSECAPYNIHLHCGWFASARII 118

Query: 122 NPRVFKRLSYDDCLVNGGNPLESSQIIRFTYSNSFMYPLAFKSAQFC 168
           NP++FKRLS+DDCLVNGG PL SSQIIRFTY+NSF+YPLA KSA+FC
Sbjct: 119 NPKLFKRLSFDDCLVNGGKPLTSSQIIRFTYTNSFVYPLALKSAKFC 165


>Medtr2g025290.1 | hypothetical protein | LC | chr2:9008819-9013374
           | 20130731
          Length = 227

 Score =  147 bits (371), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 72/96 (75%), Positives = 79/96 (82%), Gaps = 1/96 (1%)

Query: 72  TKRDISISQSRGSTSGIPQYIVQIVNTCVSGCAPHDIHLHCGWFASARIINPRVFKRLSY 131
            +RDISISQ++GSTSGIPQYI+QIVNTCV GCAP+DIHLHCGWFASARI NPR+FKRLSY
Sbjct: 132 AQRDISISQNKGSTSGIPQYIMQIVNTCVFGCAPNDIHLHCGWFASARINNPRLFKRLSY 191

Query: 132 DDCLVNGGNPLESSQIIRFTYSNSFMYPLAFKSAQF 167
                       SSQIIRFTYSNS M PLAFKSA+F
Sbjct: 192 -GWFGEWREAFTSSQIIRFTYSNSLMKPLAFKSARF 226


>Medtr3g098960.1 | tapetum determinant protein | HC |
           chr3:45342801-45340418 | 20130731
          Length = 190

 Score =  120 bits (302), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 57/107 (53%), Positives = 75/107 (70%), Gaps = 6/107 (5%)

Query: 63  SKIWLHGSCTKRDISISQSRGST----SGIPQYIVQIVNTCVSGCAPHDIHLHCGWFASA 118
           ++IW    C+K DI I+Q  GST    SGIP Y V+I+N CVSGC    IHL CGWF+SA
Sbjct: 83  NRIWGDKKCSKSDIVINQ--GSTAPLPSGIPTYTVEIMNMCVSGCDISAIHLRCGWFSSA 140

Query: 119 RIINPRVFKRLSYDDCLVNGGNPLESSQIIRFTYSNSFMYPLAFKSA 165
           R+INP++FKRL Y+DCLVN G PL +   + F Y+N+++YPL+  S 
Sbjct: 141 RLINPKLFKRLRYNDCLVNDGRPLVNGGTVSFQYANTYLYPLSVSSV 187


>Medtr3g098960.3 | tapetum determinant protein | HC |
           chr3:45343002-45340418 | 20130731
          Length = 190

 Score =  120 bits (302), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 57/107 (53%), Positives = 75/107 (70%), Gaps = 6/107 (5%)

Query: 63  SKIWLHGSCTKRDISISQSRGST----SGIPQYIVQIVNTCVSGCAPHDIHLHCGWFASA 118
           ++IW    C+K DI I+Q  GST    SGIP Y V+I+N CVSGC    IHL CGWF+SA
Sbjct: 83  NRIWGDKKCSKSDIVINQ--GSTAPLPSGIPTYTVEIMNMCVSGCDISAIHLRCGWFSSA 140

Query: 119 RIINPRVFKRLSYDDCLVNGGNPLESSQIIRFTYSNSFMYPLAFKSA 165
           R+INP++FKRL Y+DCLVN G PL +   + F Y+N+++YPL+  S 
Sbjct: 141 RLINPKLFKRLRYNDCLVNDGRPLVNGGTVSFQYANTYLYPLSVSSV 187


>Medtr3g098960.2 | tapetum determinant protein | HC |
           chr3:45342801-45340425 | 20130731
          Length = 226

 Score =  120 bits (302), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 57/107 (53%), Positives = 75/107 (70%), Gaps = 6/107 (5%)

Query: 63  SKIWLHGSCTKRDISISQSRGST----SGIPQYIVQIVNTCVSGCAPHDIHLHCGWFASA 118
           ++IW    C+K DI I+Q  GST    SGIP Y V+I+N CVSGC    IHL CGWF+SA
Sbjct: 119 NRIWGDKKCSKSDIVINQ--GSTAPLPSGIPTYTVEIMNMCVSGCDISAIHLRCGWFSSA 176

Query: 119 RIINPRVFKRLSYDDCLVNGGNPLESSQIIRFTYSNSFMYPLAFKSA 165
           R+INP++FKRL Y+DCLVN G PL +   + F Y+N+++YPL+  S 
Sbjct: 177 RLINPKLFKRLRYNDCLVNDGRPLVNGGTVSFQYANTYLYPLSVSSV 223


>Medtr5g096130.1 | transmembrane protein, putative | LC |
           chr5:42030285-42028573 | 20130731
          Length = 155

 Score =  107 bits (267), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 48/102 (47%), Positives = 71/102 (69%), Gaps = 2/102 (1%)

Query: 65  IWLHGSCTKRDISISQSRGST--SGIPQYIVQIVNTCVSGCAPHDIHLHCGWFASARIIN 122
           + +   C K  I I+Q+  +   +GIPQY V+IVNTC+SG    +IH+ CG F+SAR+I+
Sbjct: 50  LIIDDKCDKSSIQINQAPTTPLPNGIPQYTVEIVNTCLSGYNISNIHIDCGMFSSARLID 109

Query: 123 PRVFKRLSYDDCLVNGGNPLESSQIIRFTYSNSFMYPLAFKS 164
           P +FKRL+Y DCLVN G P  + ++I F+Y+N++ YPL+  S
Sbjct: 110 PTIFKRLNYSDCLVNSGKPFPNGKVISFSYANTYPYPLSVSS 151


>Medtr8g096400.1 | tapetum determinant protein | HC |
           chr8:40432454-40432200 | 20130731
          Length = 84

 Score = 99.8 bits (247), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 43/81 (53%), Positives = 56/81 (69%)

Query: 86  SGIPQYIVQIVNTCVSGCAPHDIHLHCGWFASARIINPRVFKRLSYDDCLVNGGNPLESS 145
           +GIP + V+I NTC+ GC   DIH+ CG F S R+INP +FKRL Y+DCLVNGG  L + 
Sbjct: 2   NGIPTHTVEISNTCLRGCNIFDIHVACGKFGSVRLINPNIFKRLKYNDCLVNGGKTLANG 61

Query: 146 QIIRFTYSNSFMYPLAFKSAQ 166
             I F Y+N+F YPL+  S +
Sbjct: 62  ATISFKYANTFSYPLSISSVR 82


>Medtr2g025320.1 | hypothetical protein | LC | chr2:9020533-9021383
           | 20130731
          Length = 73

 Score = 90.1 bits (222), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 41/50 (82%), Positives = 45/50 (90%)

Query: 73  KRDISISQSRGSTSGIPQYIVQIVNTCVSGCAPHDIHLHCGWFASARIIN 122
           +RDI ISQS+GSTSGIP YIVQIV+TCV G +PHDIHLHCGWFAS RIIN
Sbjct: 22  QRDIRISQSKGSTSGIPHYIVQIVSTCVFGYSPHDIHLHCGWFASTRIIN 71


>Medtr2g025350.1 | transmembrane protein, putative | LC |
           chr2:9030476-9030927 | 20130731
          Length = 89

 Score = 81.3 bits (199), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 35/50 (70%), Positives = 42/50 (84%)

Query: 72  TKRDISISQSRGSTSGIPQYIVQIVNTCVSGCAPHDIHLHCGWFASARII 121
            +RDISISQS+GSTSGIPQYI+QIVN+CV GCAP+DIH HCGW     ++
Sbjct: 36  AQRDISISQSKGSTSGIPQYIMQIVNSCVFGCAPNDIHHHCGWIVQETLL 85


>Medtr2g438190.1 | beta-1,3-N-acetylglucosaminyltransferase family
           protein | LC | chr2:15406677-15407128 | 20130731
          Length = 122

 Score = 50.4 bits (119), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 4/94 (4%)

Query: 68  HGSCTKRDISISQ-SRGSTSGIPQYIVQIVNTCVSGCAPHDIHLHCGWFASARIINPRVF 126
           +  C+ +DIS++Q   G     P++ V I N C   C   ++ L+C  F ++  I P V 
Sbjct: 22  YSQCSLKDISVTQYETGVVENKPEWTVYISNKC--HCTQKNVKLNCTGFQTSLGITPSVL 79

Query: 127 KRLSYDDCLVNGGNPLESSQIIRFTYSNSFMYPL 160
            R+S ++C++N G P++ +  I F Y     +PL
Sbjct: 80  -RVSDNECILNDGEPIDKNLHIVFFYVWDKSFPL 112


>Medtr2g025210.1 | transmembrane protein, putative | LC |
           chr2:8978798-8979874 | 20130731
          Length = 115

 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 20/24 (83%), Positives = 22/24 (91%)

Query: 108 IHLHCGWFASARIINPRVFKRLSY 131
           IHLHCGWFASARI NPR+FKRL +
Sbjct: 89  IHLHCGWFASARINNPRLFKRLLW 112