Miyakogusa Predicted Gene

Lj6g3v1915840.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1915840.1 Non Characterized Hit- tr|I1L0Q9|I1L0Q9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.19118
PE,74.76,0,4FE4S_FER_2,4Fe-4S ferredoxin-type, iron-sulpur binding
domain; 4Fe-4S ferredoxins,NULL; no descript,CUFF.60841.1
         (291 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g034140.1 | iron-sulfur-binding 4Fe-4S ferredoxin | HC | c...   411   e-115
Medtr2g034140.2 | iron-sulfur-binding 4Fe-4S ferredoxin | HC | c...   402   e-112

>Medtr2g034140.1 | iron-sulfur-binding 4Fe-4S ferredoxin | HC |
           chr2:13037142-13034406 | 20130731
          Length = 425

 Score =  411 bits (1057), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 209/294 (71%), Positives = 230/294 (78%), Gaps = 15/294 (5%)

Query: 5   ALRCFCAPDIPTQYQNHVKLEQRSSNKKCL--QNVKSLVNTXX---XXXXXXXXXXXXQR 59
           +LR FCA +I    ++  K++     KKC+  Q VK+L+NT                 QR
Sbjct: 3   SLRFFCATNISVSTKHKAKVD-----KKCVVHQKVKNLINTLELPSISSSSSTPLESLQR 57

Query: 60  GNWVKLICGASFEDVVDIRNLSLVYTLAGVDCIDCXXXXXXXXXXNEGIEAARDILC-IR 118
           GNWVKLICGASFEDVVDIRNLSLVYTLAGVDCIDC          NEGIEAARDILC +R
Sbjct: 58  GNWVKLICGASFEDVVDIRNLSLVYTLAGVDCIDCAADASVVSAVNEGIEAARDILCCLR 117

Query: 119 RPWVMISVNDDKDLHFRKAEFDPEDCPADCSRPCENVCPANAISFQRKP----NVGNMML 174
           RPWVMISVNDDKDLHFRKAEFDPEDCP+DCSRPCENVCPANAISFQ K     +      
Sbjct: 118 RPWVMISVNDDKDLHFRKAEFDPEDCPSDCSRPCENVCPANAISFQEKSTSQISCNTEAP 177

Query: 175 ENLKDGVITERCYGCGRCLPVCPYDKIREVTYVRDAITTADLIKRNDVDAMEIHTSGRQS 234
             LKDGVITERCYGCGRCLPVCPYDKIREVTYVRDA+TT+DLIKRNDVDA+EIHTS RQS
Sbjct: 178 RVLKDGVITERCYGCGRCLPVCPYDKIREVTYVRDAVTTSDLIKRNDVDAIEIHTSARQS 237

Query: 235 TLFEELWYALGDTVQNLKLIAVSLPNNGDSTISSMNKMFSIMKPSLRGFNLWQM 288
            LFEELW AL D+V+NLKL+AVSLPN GDSTISSMNKM+SIMKP+LR FNLWQ+
Sbjct: 238 RLFEELWRALADSVENLKLVAVSLPNVGDSTISSMNKMYSIMKPNLRNFNLWQL 291


>Medtr2g034140.2 | iron-sulfur-binding 4Fe-4S ferredoxin | HC |
           chr2:13037142-13034406 | 20130731
          Length = 411

 Score =  402 bits (1033), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 202/269 (75%), Positives = 218/269 (81%), Gaps = 10/269 (3%)

Query: 30  NKKCL--QNVKSLVNTXX---XXXXXXXXXXXXQRGNWVKLICGASFEDVVDIRNLSLVY 84
           +KKC+  Q VK+L+NT                 QRGNWVKLICGASFEDVVDIRNLSLVY
Sbjct: 9   DKKCVVHQKVKNLINTLELPSISSSSSTPLESLQRGNWVKLICGASFEDVVDIRNLSLVY 68

Query: 85  TLAGVDCIDCXXXXXXXXXXNEGIEAARDILC-IRRPWVMISVNDDKDLHFRKAEFDPED 143
           TLAGVDCIDC          NEGIEAARDILC +RRPWVMISVNDDKDLHFRKAEFDPED
Sbjct: 69  TLAGVDCIDCAADASVVSAVNEGIEAARDILCCLRRPWVMISVNDDKDLHFRKAEFDPED 128

Query: 144 CPADCSRPCENVCPANAISFQRKP----NVGNMMLENLKDGVITERCYGCGRCLPVCPYD 199
           CP+DCSRPCENVCPANAISFQ K     +        LKDGVITERCYGCGRCLPVCPYD
Sbjct: 129 CPSDCSRPCENVCPANAISFQEKSTSQISCNTEAPRVLKDGVITERCYGCGRCLPVCPYD 188

Query: 200 KIREVTYVRDAITTADLIKRNDVDAMEIHTSGRQSTLFEELWYALGDTVQNLKLIAVSLP 259
           KIREVTYVRDA+TT+DLIKRNDVDA+EIHTS RQS LFEELW AL D+V+NLKL+AVSLP
Sbjct: 189 KIREVTYVRDAVTTSDLIKRNDVDAIEIHTSARQSRLFEELWRALADSVENLKLVAVSLP 248

Query: 260 NNGDSTISSMNKMFSIMKPSLRGFNLWQM 288
           N GDSTISSMNKM+SIMKP+LR FNLWQ+
Sbjct: 249 NVGDSTISSMNKMYSIMKPNLRNFNLWQL 277