Miyakogusa Predicted Gene

Lj6g3v1915830.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1915830.1 Non Characterized Hit- tr|I1MGE7|I1MGE7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.18115 PE,85.98,0,Citrate
synthase,Citrate synthase-like, core; SUBFAMILY NOT NAMED,NULL; FAMILY
NOT NAMED,NULL,CUFF.60840.1
         (107 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g034090.1 | ATP:citrate lyase | HC | chr2:13014494-1300844...   199   4e-52
Medtr2g034090.2 | ATP:citrate lyase | HC | chr2:13014267-1300847...   199   4e-52

>Medtr2g034090.1 | ATP:citrate lyase | HC | chr2:13014494-13008447 |
           20130731
          Length = 608

 Score =  199 bits (507), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 92/106 (86%), Positives = 98/106 (92%)

Query: 1   MLQKFARAHFPCVKYMEYAVQVEDYTLSKSNKLILNIDGAIASLFLDLLAGCGMFTEQEI 60
           +LQKFAR HFP VKYMEYAVQVE YTL+K+N L+LN+DGAI SLFLDLLAG GMFT+QEI
Sbjct: 502 LLQKFARTHFPSVKYMEYAVQVETYTLTKANNLVLNVDGAIGSLFLDLLAGSGMFTKQEI 561

Query: 61  SEIVEIGYLNGLFVLARSIGLIGHAFDQKRLKQPLYRHPWEDVLYT 106
            EIVEIGYLNGLFVLARSIGLIGH FDQKRLKQPLYRHPWEDVLYT
Sbjct: 562 DEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPWEDVLYT 607


>Medtr2g034090.2 | ATP:citrate lyase | HC | chr2:13014267-13008475 |
           20130731
          Length = 608

 Score =  199 bits (507), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 92/106 (86%), Positives = 98/106 (92%)

Query: 1   MLQKFARAHFPCVKYMEYAVQVEDYTLSKSNKLILNIDGAIASLFLDLLAGCGMFTEQEI 60
           +LQKFAR HFP VKYMEYAVQVE YTL+K+N L+LN+DGAI SLFLDLLAG GMFT+QEI
Sbjct: 502 LLQKFARTHFPSVKYMEYAVQVETYTLTKANNLVLNVDGAIGSLFLDLLAGSGMFTKQEI 561

Query: 61  SEIVEIGYLNGLFVLARSIGLIGHAFDQKRLKQPLYRHPWEDVLYT 106
            EIVEIGYLNGLFVLARSIGLIGH FDQKRLKQPLYRHPWEDVLYT
Sbjct: 562 DEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPWEDVLYT 607