Miyakogusa Predicted Gene

Lj6g3v1904530.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1904530.1 Non Characterized Hit- tr|I1L0R4|I1L0R4_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max PE=4,50.52,7e-19,no
description,Pectinesterase inhibitor; PMEI,Pectinesterase inhibitor;
Plant invertase/pectin methy,CUFF.60137.1
         (97 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g034220.1 | plant invertase/pectin methylesterase inhibito...   118   1e-27

>Medtr2g034220.1 | plant invertase/pectin methylesterase inhibitor |
           HC | chr2:13075309-13076163 | 20130731
          Length = 284

 Score =  118 bits (296), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 58/97 (59%), Positives = 76/97 (78%), Gaps = 2/97 (2%)

Query: 1   MSKVAKHSAKSPELADALGDCKEKYHNVLKNLRKAMHAVSSHDFGKVNMILSGVMADVST 60
           +SKVA H+AK+PE+A A+ DCKE+Y++ L NL+KA  A++S D G + ++LS VMADVST
Sbjct: 186 ISKVAAHAAKNPEVASAVADCKEQYNSALDNLQKAADAIASRDLGTITVMLSAVMADVST 245

Query: 61  CESQFEDLKSSPIK--SKNHGLVSIMVNNCLSLTSLI 95
           CES FEDLK+SP    S N GLVSI V+NCLS+ +LI
Sbjct: 246 CESAFEDLKASPTSTMSSNDGLVSITVSNCLSIANLI 282