Miyakogusa Predicted Gene

Lj6g3v1903460.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1903460.1 Non Characterized Hit- tr|I0I929|I0I929_CALAS
Uncharacterized protein OS=Caldilinea aerophila
(strai,27.72,0.00000000001,seg,NULL;
Exo_endo_phos,Endonuclease/exonuclease/phosphatase; DNase
I-like,Endonuclease/exonuclease/,CUFF.60133.1
         (481 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g020860.1 | endonuclease/exonuclease/phosphatase family pr...   706   0.0  
Medtr2g020860.3 | endonuclease/exonuclease/phosphatase family pr...   706   0.0  
Medtr2g020860.2 | endonuclease/exonuclease/phosphatase family pr...   499   e-141
Medtr2g020860.4 | endonuclease/exonuclease/phosphatase family pr...   498   e-141
Medtr1g089630.1 | endonuclease/exonuclease/phosphatase family pr...   453   e-127
Medtr1g089630.3 | endonuclease/exonuclease/phosphatase family pr...   296   2e-80
Medtr1g089630.2 | endonuclease/exonuclease/phosphatase family pr...   294   1e-79

>Medtr2g020860.1 | endonuclease/exonuclease/phosphatase family
           protein | HC | chr2:7017099-7011903 | 20130731
          Length = 488

 Score =  706 bits (1822), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/458 (77%), Positives = 388/458 (84%), Gaps = 20/458 (4%)

Query: 1   MLSVIRRKLRNLYSRILWILLKRPRSKVVIKRFRKLKCKGHSRAELCDNKTKTHSNGHLV 60
           M SVIRRKLR +YSRIL++L KRPRSKVVIKRFRKL C          N    H   HLV
Sbjct: 19  MFSVIRRKLRYIYSRILFLLWKRPRSKVVIKRFRKLNCNNKKTKSSKSNSNGAH---HLV 75

Query: 61  ESESRRPIRIASFNVAMFSLAPAVSEFDDLIISNNK-----SSVKDDFPKSILKQSPLHA 115
           E +SR+PIRIA+FNVAMFSLAPA+SE DD ++ N K     S+   DFPKSILKQSPLH+
Sbjct: 76  ECDSRKPIRIATFNVAMFSLAPAISENDDYVMYNQKKKNSNSTTSADFPKSILKQSPLHS 135

Query: 116 SLNPKAQNHSDSKILPRSNLK-VSINLPDNEISLSNS----ASEKITGSASGRHQVPARS 170
           S+N    ++SD+ I+PRSNLK VSINLPDNEISL+NS    + E I   +S R+QVPARS
Sbjct: 136 SMN---LSNSDTNIMPRSNLKQVSINLPDNEISLANSKILGSIEDIGSVSSRRNQVPARS 192

Query: 171 PVCFPFMMN----FCEGIEKFSSSSRSILEVLREIDADVVALQDVKAEEEKSMKPLSDLA 226
           PVCFPF+MN    +CE + +  SSSRSILEVLREIDADVVALQDVKAEEEK M+PLSDLA
Sbjct: 193 PVCFPFLMNMNMNYCEEVNEKFSSSRSILEVLREIDADVVALQDVKAEEEKCMRPLSDLA 252

Query: 227 GALGMKYVFAESWAPEYGNAILSKWPIKRWKVQKIADDDDFRNVLKATIDVPWAGEINFH 286
            ALGMKYVFAESWAPEYGNAILSKWPIK+WKVQKIADDDDFRNVLKATIDVPWAGEIN H
Sbjct: 253 AALGMKYVFAESWAPEYGNAILSKWPIKKWKVQKIADDDDFRNVLKATIDVPWAGEINLH 312

Query: 287 STQLDHLDEHWRMKQVNAIIRSNDPPHILAGGLNSLYGPDYSSERWKDIVRYYEKLGKPK 346
           STQLDHLDE+WRMKQVNAIIRSNDPPHILAGGLNSLY  DYSS+RW DIV YYEKLGKP+
Sbjct: 313 STQLDHLDENWRMKQVNAIIRSNDPPHILAGGLNSLYRADYSSQRWTDIVNYYEKLGKPR 372

Query: 347 PMTEVMNFMRSKAYEDAKDYAGECEPIVIIAKGQNVQGTCKYGTRVDYILGSPNSPYKFV 406
           PMTEVMNFM+SK Y+DAKDYAGECEPIVIIAKGQNVQGTCKYGTRVDYILGS  SPYKFV
Sbjct: 373 PMTEVMNFMKSKDYDDAKDYAGECEPIVIIAKGQNVQGTCKYGTRVDYILGSSKSPYKFV 432

Query: 407 PGSYSVVSSKGTSDHHIVKVDIMKVNTSAQKNVMKQCR 444
           PGSYSV+SSKGTSDHHIVKVDIMKVNTS Q NV+KQC+
Sbjct: 433 PGSYSVISSKGTSDHHIVKVDIMKVNTSTQNNVIKQCK 470


>Medtr2g020860.3 | endonuclease/exonuclease/phosphatase family
           protein | HC | chr2:7017097-7011903 | 20130731
          Length = 470

 Score =  706 bits (1821), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/458 (77%), Positives = 388/458 (84%), Gaps = 20/458 (4%)

Query: 1   MLSVIRRKLRNLYSRILWILLKRPRSKVVIKRFRKLKCKGHSRAELCDNKTKTHSNGHLV 60
           M SVIRRKLR +YSRIL++L KRPRSKVVIKRFRKL C          N    H   HLV
Sbjct: 1   MFSVIRRKLRYIYSRILFLLWKRPRSKVVIKRFRKLNCNNKKTKSSKSNSNGAH---HLV 57

Query: 61  ESESRRPIRIASFNVAMFSLAPAVSEFDDLIISNNK-----SSVKDDFPKSILKQSPLHA 115
           E +SR+PIRIA+FNVAMFSLAPA+SE DD ++ N K     S+   DFPKSILKQSPLH+
Sbjct: 58  ECDSRKPIRIATFNVAMFSLAPAISENDDYVMYNQKKKNSNSTTSADFPKSILKQSPLHS 117

Query: 116 SLNPKAQNHSDSKILPRSNLK-VSINLPDNEISLSNS----ASEKITGSASGRHQVPARS 170
           S+N    ++SD+ I+PRSNLK VSINLPDNEISL+NS    + E I   +S R+QVPARS
Sbjct: 118 SMN---LSNSDTNIMPRSNLKQVSINLPDNEISLANSKILGSIEDIGSVSSRRNQVPARS 174

Query: 171 PVCFPFMMN----FCEGIEKFSSSSRSILEVLREIDADVVALQDVKAEEEKSMKPLSDLA 226
           PVCFPF+MN    +CE + +  SSSRSILEVLREIDADVVALQDVKAEEEK M+PLSDLA
Sbjct: 175 PVCFPFLMNMNMNYCEEVNEKFSSSRSILEVLREIDADVVALQDVKAEEEKCMRPLSDLA 234

Query: 227 GALGMKYVFAESWAPEYGNAILSKWPIKRWKVQKIADDDDFRNVLKATIDVPWAGEINFH 286
            ALGMKYVFAESWAPEYGNAILSKWPIK+WKVQKIADDDDFRNVLKATIDVPWAGEIN H
Sbjct: 235 AALGMKYVFAESWAPEYGNAILSKWPIKKWKVQKIADDDDFRNVLKATIDVPWAGEINLH 294

Query: 287 STQLDHLDEHWRMKQVNAIIRSNDPPHILAGGLNSLYGPDYSSERWKDIVRYYEKLGKPK 346
           STQLDHLDE+WRMKQVNAIIRSNDPPHILAGGLNSLY  DYSS+RW DIV YYEKLGKP+
Sbjct: 295 STQLDHLDENWRMKQVNAIIRSNDPPHILAGGLNSLYRADYSSQRWTDIVNYYEKLGKPR 354

Query: 347 PMTEVMNFMRSKAYEDAKDYAGECEPIVIIAKGQNVQGTCKYGTRVDYILGSPNSPYKFV 406
           PMTEVMNFM+SK Y+DAKDYAGECEPIVIIAKGQNVQGTCKYGTRVDYILGS  SPYKFV
Sbjct: 355 PMTEVMNFMKSKDYDDAKDYAGECEPIVIIAKGQNVQGTCKYGTRVDYILGSSKSPYKFV 414

Query: 407 PGSYSVVSSKGTSDHHIVKVDIMKVNTSAQKNVMKQCR 444
           PGSYSV+SSKGTSDHHIVKVDIMKVNTS Q NV+KQC+
Sbjct: 415 PGSYSVISSKGTSDHHIVKVDIMKVNTSTQNNVIKQCK 452


>Medtr2g020860.2 | endonuclease/exonuclease/phosphatase family
           protein | HC | chr2:7017099-7011903 | 20130731
          Length = 397

 Score =  499 bits (1284), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 258/350 (73%), Positives = 286/350 (81%), Gaps = 20/350 (5%)

Query: 1   MLSVIRRKLRNLYSRILWILLKRPRSKVVIKRFRKLKCKGHSRAELCDNKTKTHSNGHLV 60
           M SVIRRKLR +YSRIL++L KRPRSKVVIKRFRKL C          N    H   HLV
Sbjct: 19  MFSVIRRKLRYIYSRILFLLWKRPRSKVVIKRFRKLNCNNKKTKSSKSNSNGAH---HLV 75

Query: 61  ESESRRPIRIASFNVAMFSLAPAVSEFDDLIISNNK-----SSVKDDFPKSILKQSPLHA 115
           E +SR+PIRIA+FNVAMFSLAPA+SE DD ++ N K     S+   DFPKSILKQSPLH+
Sbjct: 76  ECDSRKPIRIATFNVAMFSLAPAISENDDYVMYNQKKKNSNSTTSADFPKSILKQSPLHS 135

Query: 116 SLNPKAQNHSDSKILPRSNLK-VSINLPDNEISLSNS----ASEKITGSASGRHQVPARS 170
           S+N    ++SD+ I+PRSNLK VSINLPDNEISL+NS    + E I   +S R+QVPARS
Sbjct: 136 SMN---LSNSDTNIMPRSNLKQVSINLPDNEISLANSKILGSIEDIGSVSSRRNQVPARS 192

Query: 171 PVCFPFMMN----FCEGIEKFSSSSRSILEVLREIDADVVALQDVKAEEEKSMKPLSDLA 226
           PVCFPF+MN    +CE + +  SSSRSILEVLREIDADVVALQDVKAEEEK M+PLSDLA
Sbjct: 193 PVCFPFLMNMNMNYCEEVNEKFSSSRSILEVLREIDADVVALQDVKAEEEKCMRPLSDLA 252

Query: 227 GALGMKYVFAESWAPEYGNAILSKWPIKRWKVQKIADDDDFRNVLKATIDVPWAGEINFH 286
            ALGMKYVFAESWAPEYGNAILSKWPIK+WKVQKIADDDDFRNVLKATIDVPWAGEIN H
Sbjct: 253 AALGMKYVFAESWAPEYGNAILSKWPIKKWKVQKIADDDDFRNVLKATIDVPWAGEINLH 312

Query: 287 STQLDHLDEHWRMKQVNAIIRSNDPPHILAGGLNSLYGPDYSSERWKDIV 336
           STQLDHLDE+WRMKQVNAIIRSNDPPHILAGGLNSLY  DYSS+RW DIV
Sbjct: 313 STQLDHLDENWRMKQVNAIIRSNDPPHILAGGLNSLYRADYSSQRWTDIV 362


>Medtr2g020860.4 | endonuclease/exonuclease/phosphatase family
           protein | HC | chr2:7017099-7011903 | 20130731
          Length = 379

 Score =  498 bits (1282), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 258/350 (73%), Positives = 286/350 (81%), Gaps = 20/350 (5%)

Query: 1   MLSVIRRKLRNLYSRILWILLKRPRSKVVIKRFRKLKCKGHSRAELCDNKTKTHSNGHLV 60
           M SVIRRKLR +YSRIL++L KRPRSKVVIKRFRKL C          N    H   HLV
Sbjct: 1   MFSVIRRKLRYIYSRILFLLWKRPRSKVVIKRFRKLNCNNKKTKSSKSNSNGAH---HLV 57

Query: 61  ESESRRPIRIASFNVAMFSLAPAVSEFDDLIISNNK-----SSVKDDFPKSILKQSPLHA 115
           E +SR+PIRIA+FNVAMFSLAPA+SE DD ++ N K     S+   DFPKSILKQSPLH+
Sbjct: 58  ECDSRKPIRIATFNVAMFSLAPAISENDDYVMYNQKKKNSNSTTSADFPKSILKQSPLHS 117

Query: 116 SLNPKAQNHSDSKILPRSNLK-VSINLPDNEISLSNS----ASEKITGSASGRHQVPARS 170
           S+N    ++SD+ I+PRSNLK VSINLPDNEISL+NS    + E I   +S R+QVPARS
Sbjct: 118 SMN---LSNSDTNIMPRSNLKQVSINLPDNEISLANSKILGSIEDIGSVSSRRNQVPARS 174

Query: 171 PVCFPFMMN----FCEGIEKFSSSSRSILEVLREIDADVVALQDVKAEEEKSMKPLSDLA 226
           PVCFPF+MN    +CE + +  SSSRSILEVLREIDADVVALQDVKAEEEK M+PLSDLA
Sbjct: 175 PVCFPFLMNMNMNYCEEVNEKFSSSRSILEVLREIDADVVALQDVKAEEEKCMRPLSDLA 234

Query: 227 GALGMKYVFAESWAPEYGNAILSKWPIKRWKVQKIADDDDFRNVLKATIDVPWAGEINFH 286
            ALGMKYVFAESWAPEYGNAILSKWPIK+WKVQKIADDDDFRNVLKATIDVPWAGEIN H
Sbjct: 235 AALGMKYVFAESWAPEYGNAILSKWPIKKWKVQKIADDDDFRNVLKATIDVPWAGEINLH 294

Query: 287 STQLDHLDEHWRMKQVNAIIRSNDPPHILAGGLNSLYGPDYSSERWKDIV 336
           STQLDHLDE+WRMKQVNAIIRSNDPPHILAGGLNSLY  DYSS+RW DIV
Sbjct: 295 STQLDHLDENWRMKQVNAIIRSNDPPHILAGGLNSLYRADYSSQRWTDIV 344


>Medtr1g089630.1 | endonuclease/exonuclease/phosphatase family
           protein | HC | chr1:40147548-40143685 | 20130731
          Length = 456

 Score =  453 bits (1165), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 248/442 (56%), Positives = 296/442 (66%), Gaps = 57/442 (12%)

Query: 22  KRPRSKVVIKRFRKLKCKGHSRAELCDNKTKT-HSNGHLVESESRRPIRIASFNVAMFSL 80
           +R +SKV I    K      S+ E   N + T H N  L    +++ IR+A+FN A+FS+
Sbjct: 22  RRSKSKVTIINNPK------SQNETSSNFSSTVHPNTQL---GTQKQIRVATFNAALFSM 72

Query: 81  APAV---SEFDD----------LIISNNKSSVKDDFPKSILKQSPLHASLNPKAQNHSDS 127
           APA+   + F+D            I++   S  D  PKSILKQ+    ++N         
Sbjct: 73  APALPTTTTFEDENNVVGKTNTFDINSRSKSTNDRPPKSILKQTQSQKNINLVQ------ 126

Query: 128 KILPRSNLKVSINLPDNEISL------SNSASEKITGSASGRHQVPARSPVCFPFMMNFC 181
             L +S  +VSINLPDNEIS+      S S  EK   S SG H                 
Sbjct: 127 --LTKSKTRVSINLPDNEISMLRSRQSSFSEHEKERASTSGVHYY--------------- 169

Query: 182 EGIEKFSSSSRSILEVLREIDADVVALQDVKAEEEKSMKPLSDLAGALGMKYVFAESWAP 241
               K   S R+++EVLRE+DAD++ LQDVKAEEE  MKPLSDLA ALGM YVFAESWAP
Sbjct: 170 ----KHVKSGRTLVEVLREVDADILGLQDVKAEEENGMKPLSDLAAALGMNYVFAESWAP 225

Query: 242 EYGNAILSKWPIKRWKVQKIADDDDFRNVLKATIDVPWAGEINFHSTQLDHLDEHWRMKQ 301
           EYGNA+ SKWPIKRW V KI D  D RNVLKATIDVP AGE+NF+ T LDHLDE+WRMKQ
Sbjct: 226 EYGNAVFSKWPIKRWNVNKIFDHTDIRNVLKATIDVPEAGELNFYCTHLDHLDENWRMKQ 285

Query: 302 VNAIIRSNDPPHILAGGLNSLYGPDYSSERWKDIVRYYEKLGKPKPMTEVMNFMRSKAYE 361
           +NAII+SND PHILAGGLNSL   DYS ERW DIV+YYE++GKP P  EVM  ++SK Y 
Sbjct: 286 INAIIQSNDEPHILAGGLNSLDESDYSQERWTDIVKYYEEMGKPTPKVEVMKHLKSKDYT 345

Query: 362 DAKDYAGECEPIVIIAKGQNVQGTCKYGTRVDYILGSPNSPYKFVPGSYSVVSSKGTSDH 421
           DAK+YAGE E +V+IAKGQ+VQGTCKYGTRVDYIL S  SPYKFVPGSYSV+SSKGTSDH
Sbjct: 346 DAKNYAGEYESVVMIAKGQSVQGTCKYGTRVDYILSSSYSPYKFVPGSYSVLSSKGTSDH 405

Query: 422 HIVKVDIM-KVNTSAQKNVMKQ 442
           HIVKVD+M KVN  +Q+N  K+
Sbjct: 406 HIVKVDVMIKVNNDSQENATKK 427


>Medtr1g089630.3 | endonuclease/exonuclease/phosphatase family
           protein | HC | chr1:40148162-40143421 | 20130731
          Length = 387

 Score =  296 bits (759), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 173/338 (51%), Positives = 208/338 (61%), Gaps = 56/338 (16%)

Query: 22  KRPRSKVVIKRFRKLKCKGHSRAELCDNKTKT-HSNGHLVESESRRPIRIASFNVAMFSL 80
           +R +SKV I    K      S+ E   N + T H N  L    +++ IR+A+FN A+FS+
Sbjct: 34  RRSKSKVTIINNPK------SQNETSSNFSSTVHPNTQL---GTQKQIRVATFNAALFSM 84

Query: 81  APAV---SEFDD----------LIISNNKSSVKDDFPKSILKQSPLHASLNPKAQNHSDS 127
           APA+   + F+D            I++   S  D  PKSILKQ+    ++N         
Sbjct: 85  APALPTTTTFEDENNVVGKTNTFDINSRSKSTNDRPPKSILKQTQSQKNINLVQ------ 138

Query: 128 KILPRSNLKVSINLPDNEISL------SNSASEKITGSASGRHQVPARSPVCFPFMMNFC 181
             L +S  +VSINLPDNEIS+      S S  EK   S SG H                 
Sbjct: 139 --LTKSKTRVSINLPDNEISMLRSRQSSFSEHEKERASTSGVHYY--------------- 181

Query: 182 EGIEKFSSSSRSILEVLREIDADVVALQDVKAEEEKSMKPLSDLAGALGMKYVFAESWAP 241
               K   S R+++EVLRE+DAD++ LQDVKAEEE  MKPLSDLA ALGM YVFAESWAP
Sbjct: 182 ----KHVKSGRTLVEVLREVDADILGLQDVKAEEENGMKPLSDLAAALGMNYVFAESWAP 237

Query: 242 EYGNAILSKWPIKRWKVQKIADDDDFRNVLKATIDVPWAGEINFHSTQLDHLDEHWRMKQ 301
           EYGNA+ SKWPIKRW V KI D  D RNVLKATIDVP AGE+NF+ T LDHLDE+WRMKQ
Sbjct: 238 EYGNAVFSKWPIKRWNVNKIFDHTDIRNVLKATIDVPEAGELNFYCTHLDHLDENWRMKQ 297

Query: 302 VNAIIRSNDPPHILAGGLNSLYGPDYSSERWKDIVRYY 339
           +NAII+SND PHILAGGLNSL   DYS ERW DIV+ Y
Sbjct: 298 INAIIQSNDEPHILAGGLNSLDESDYSQERWTDIVKVY 335


>Medtr1g089630.2 | endonuclease/exonuclease/phosphatase family
           protein | HC | chr1:40148162-40143421 | 20130731
          Length = 347

 Score =  294 bits (753), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 172/336 (51%), Positives = 209/336 (62%), Gaps = 56/336 (16%)

Query: 22  KRPRSKVVIKRFRKLKCKGHSRAELCDNKTKT-HSNGHLVESESRRPIRIASFNVAMFSL 80
           +R +SKV I    K      S+ E   N + T H N  L    +++ IR+A+FN A+FS+
Sbjct: 34  RRSKSKVTIINNPK------SQNETSSNFSSTVHPNTQL---GTQKQIRVATFNAALFSM 84

Query: 81  APAV---SEFDD----------LIISNNKSSVKDDFPKSILKQSPLHASLNPKAQNHSDS 127
           APA+   + F+D            I++   S  D  PKSILKQ+        ++Q + + 
Sbjct: 85  APALPTTTTFEDENNVVGKTNTFDINSRSKSTNDRPPKSILKQT--------QSQKNINL 136

Query: 128 KILPRSNLKVSINLPDNEISL------SNSASEKITGSASGRHQVPARSPVCFPFMMNFC 181
             L +S  +VSINLPDNEIS+      S S  EK   S SG H                 
Sbjct: 137 VQLTKSKTRVSINLPDNEISMLRSRQSSFSEHEKERASTSGVHYY--------------- 181

Query: 182 EGIEKFSSSSRSILEVLREIDADVVALQDVKAEEEKSMKPLSDLAGALGMKYVFAESWAP 241
               K   S R+++EVLRE+DAD++ LQDVKAEEE  MKPLSDLA ALGM YVFAESWAP
Sbjct: 182 ----KHVKSGRTLVEVLREVDADILGLQDVKAEEENGMKPLSDLAAALGMNYVFAESWAP 237

Query: 242 EYGNAILSKWPIKRWKVQKIADDDDFRNVLKATIDVPWAGEINFHSTQLDHLDEHWRMKQ 301
           EYGNA+ SKWPIKRW V KI D  D RNVLKATIDVP AGE+NF+ T LDHLDE+WRMKQ
Sbjct: 238 EYGNAVFSKWPIKRWNVNKIFDHTDIRNVLKATIDVPEAGELNFYCTHLDHLDENWRMKQ 297

Query: 302 VNAIIRSNDPPHILAGGLNSLYGPDYSSERWKDIVR 337
           +NAII+SND PHILAGGLNSL   DYS ERW DIV+
Sbjct: 298 INAIIQSNDEPHILAGGLNSLDESDYSQERWTDIVK 333