Miyakogusa Predicted Gene
- Lj6g3v1901370.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1901370.1 tr|Q3LUS2|Q3LUS2_9ROSI S-adenosylmethionine
decarboxylase 3 (Fragment) OS=Populus maximowiczii x
Pop,66.2,3e-19,SAM_decarbox,S-adenosylmethionine decarboxylase;
S-adenosylmethionine decarboxylase,S-adenosylmethio,CUFF.60127.1
(103 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g118320.1 | S-adenosylmethionine decarboxylase proenzyme |... 142 8e-35
Medtr2g020990.1 | S-adenosylmethionine decarboxylase proenzyme |... 135 1e-32
Medtr0076s0020.1 | S-adenosylmethionine decarboxylase proenzyme ... 87 3e-18
Medtr7g018290.1 | S-adenosylmethionine decarboxylase proenzyme |... 86 9e-18
Medtr7g018290.2 | S-adenosylmethionine decarboxylase proenzyme |... 86 9e-18
Medtr0003s0660.1 | S-adenosylmethionine decarboxylase proenzyme ... 86 9e-18
Medtr8g069905.1 | S-adenosylmethionine decarboxylase proenzyme |... 82 1e-16
Medtr7g018320.1 | S-adenosylmethionine decarboxylase proenzyme |... 78 2e-15
Medtr7g018320.2 | S-adenosylmethionine decarboxylase proenzyme |... 78 2e-15
Medtr7g018310.1 | S-adenosylmethionine decarboxylase proenzyme |... 77 5e-15
>Medtr4g118320.1 | S-adenosylmethionine decarboxylase proenzyme | HC
| chr4:49019543-49021164 | 20130731
Length = 346
Score = 142 bits (357), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 69/99 (69%), Positives = 74/99 (74%), Gaps = 6/99 (6%)
Query: 1 MEICMTDLDPTLARKFFQRPXXXXXXXXXXXXMTELSGINEINRNALICDFAFDPCGYSM 60
MEICMT+LDP LARKFF+ P MTEL+GINEIN NA ICDFAFDPCGYSM
Sbjct: 183 MEICMTELDPILARKFFRPPGDGKTGDSAGKEMTELTGINEINPNAFICDFAFDPCGYSM 242
Query: 61 NSMDEDWYSTIHVTPEDGYSYASFECAAARDYVGVHNDN 99
N MD+DWYSTIHVTPEDG+SYASFEC VG NDN
Sbjct: 243 NGMDDDWYSTIHVTPEDGFSYASFEC------VGSVNDN 275
>Medtr2g020990.1 | S-adenosylmethionine decarboxylase proenzyme | HC
| chr2:7082204-7080608 | 20130731
Length = 351
Score = 135 bits (339), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 62/89 (69%), Positives = 68/89 (76%)
Query: 1 MEICMTDLDPTLARKFFQRPXXXXXXXXXXXXMTELSGINEINRNALICDFAFDPCGYSM 60
MEICMT+LDP LA KFF+RP MTEL+GINEIN+ A ICDFAFDPCGYSM
Sbjct: 181 MEICMTELDPILAGKFFRRPDEEKSGNSSGNQMTELTGINEINKEAFICDFAFDPCGYSM 240
Query: 61 NSMDEDWYSTIHVTPEDGYSYASFECAAA 89
N MD + YSTIHVTPEDGYSYASFEC +
Sbjct: 241 NGMDGECYSTIHVTPEDGYSYASFECVGS 269
>Medtr0076s0020.1 | S-adenosylmethionine decarboxylase proenzyme |
HC | scaffold0076:4170-5231 | 20130731
Length = 353
Score = 87.0 bits (214), Expect = 3e-18, Method: Composition-based stats.
Identities = 46/88 (52%), Positives = 55/88 (62%), Gaps = 6/88 (6%)
Query: 1 MEICMTDLDPTLARKFFQRPXXXXXXXXXXXXMTELSGINEINRNALICDFAFDPCGYSM 60
+E+CMT LD A FF+ MT SGI +I N+ ICDF F+PCGYSM
Sbjct: 180 LEMCMTGLDREKASVFFK------DQSDSAAKMTVNSGIRKILPNSEICDFDFEPCGYSM 233
Query: 61 NSMDEDWYSTIHVTPEDGYSYASFECAA 88
NS++ STIHVTPEDG+SYASFE A
Sbjct: 234 NSVEGAAVSTIHVTPEDGFSYASFETAG 261
>Medtr7g018290.1 | S-adenosylmethionine decarboxylase proenzyme | HC
| chr7:5904875-5902194 | 20130731
Length = 360
Score = 85.5 bits (210), Expect = 9e-18, Method: Composition-based stats.
Identities = 46/92 (50%), Positives = 56/92 (60%), Gaps = 7/92 (7%)
Query: 1 MEICMTDLDPTLARKFFQRPXXXXXXXXXXXXMTELSGINEINRNALICDFAFDPCGYSM 60
+E+CMT LD A FF+ MT+ SGI +I + ICDF F+PCGYSM
Sbjct: 182 LEMCMTGLDKEKASVFFK------TEGSSAGLMTKNSGIRKILPKSDICDFEFEPCGYSM 235
Query: 61 NSMDEDWYSTIHVTPEDGYSYASFECAAARDY 92
N ++ STIHVTPEDG+SYASFE A DY
Sbjct: 236 NGIEGSAISTIHVTPEDGFSYASFE-AVGYDY 266
>Medtr7g018290.2 | S-adenosylmethionine decarboxylase proenzyme | HC
| chr7:5904910-5902194 | 20130731
Length = 360
Score = 85.5 bits (210), Expect = 9e-18, Method: Composition-based stats.
Identities = 46/92 (50%), Positives = 56/92 (60%), Gaps = 7/92 (7%)
Query: 1 MEICMTDLDPTLARKFFQRPXXXXXXXXXXXXMTELSGINEINRNALICDFAFDPCGYSM 60
+E+CMT LD A FF+ MT+ SGI +I + ICDF F+PCGYSM
Sbjct: 182 LEMCMTGLDKEKASVFFK------TEGSSAGLMTKNSGIRKILPKSDICDFEFEPCGYSM 235
Query: 61 NSMDEDWYSTIHVTPEDGYSYASFECAAARDY 92
N ++ STIHVTPEDG+SYASFE A DY
Sbjct: 236 NGIEGSAISTIHVTPEDGFSYASFE-AVGYDY 266
>Medtr0003s0660.1 | S-adenosylmethionine decarboxylase proenzyme |
HC | scaffold0003:364911-362517 | 20130731
Length = 406
Score = 85.5 bits (210), Expect = 9e-18, Method: Composition-based stats.
Identities = 46/92 (50%), Positives = 56/92 (60%), Gaps = 7/92 (7%)
Query: 1 MEICMTDLDPTLARKFFQRPXXXXXXXXXXXXMTELSGINEINRNALICDFAFDPCGYSM 60
+E+CMT LD A FF+ MT+ SGI +I + ICDF F+PCGYSM
Sbjct: 228 LEMCMTGLDKEKASVFFK------SDASSAGLMTKNSGIRKILPKSDICDFEFEPCGYSM 281
Query: 61 NSMDEDWYSTIHVTPEDGYSYASFECAAARDY 92
N ++ STIHVTPEDG+SYASFE A DY
Sbjct: 282 NGIEGSAISTIHVTPEDGFSYASFE-AVGYDY 312
>Medtr8g069905.1 | S-adenosylmethionine decarboxylase proenzyme | HC
| chr8:29567630-29569929 | 20130731
Length = 370
Score = 82.0 bits (201), Expect = 1e-16, Method: Composition-based stats.
Identities = 43/85 (50%), Positives = 52/85 (61%), Gaps = 6/85 (7%)
Query: 1 MEICMTDLDPTLARKFFQRPXXXXXXXXXXXXMTELSGINEINRNALICDFAFDPCGYSM 60
+E+CMT LD A F++ MT SGI I ++ I DF FDPCGYSM
Sbjct: 182 LEMCMTGLDKEKASVFYKE------QSSSAFLMTANSGIRNILPDSEISDFDFDPCGYSM 235
Query: 61 NSMDEDWYSTIHVTPEDGYSYASFE 85
NS++ STIHVTPEDG+SYASFE
Sbjct: 236 NSVEGAAVSTIHVTPEDGFSYASFE 260
>Medtr7g018320.1 | S-adenosylmethionine decarboxylase proenzyme | HC
| chr7:5917402-5919733 | 20130731
Length = 356
Score = 77.8 bits (190), Expect = 2e-15, Method: Composition-based stats.
Identities = 36/56 (64%), Positives = 42/56 (75%)
Query: 33 MTELSGINEINRNALICDFAFDPCGYSMNSMDEDWYSTIHVTPEDGYSYASFECAA 88
MTE SGI +I + ICDF F+PCGYSMN ++ STIHVTPEDG+SYASFE A
Sbjct: 221 MTENSGIRKILPKSDICDFEFEPCGYSMNGIEGSAISTIHVTPEDGFSYASFEAVA 276
>Medtr7g018320.2 | S-adenosylmethionine decarboxylase proenzyme | HC
| chr7:5916929-5919645 | 20130731
Length = 356
Score = 77.8 bits (190), Expect = 2e-15, Method: Composition-based stats.
Identities = 36/56 (64%), Positives = 42/56 (75%)
Query: 33 MTELSGINEINRNALICDFAFDPCGYSMNSMDEDWYSTIHVTPEDGYSYASFECAA 88
MTE SGI +I + ICDF F+PCGYSMN ++ STIHVTPEDG+SYASFE A
Sbjct: 221 MTENSGIRKILPKSDICDFEFEPCGYSMNGIEGSAISTIHVTPEDGFSYASFEAVA 276
>Medtr7g018310.1 | S-adenosylmethionine decarboxylase proenzyme | HC
| chr7:5910516-5912994 | 20130731
Length = 385
Score = 76.6 bits (187), Expect = 5e-15, Method: Composition-based stats.
Identities = 35/53 (66%), Positives = 41/53 (77%)
Query: 33 MTELSGINEINRNALICDFAFDPCGYSMNSMDEDWYSTIHVTPEDGYSYASFE 85
MTE SGI +I + ICDF F+PCGYSMN ++ STIHVTPEDG+SYASFE
Sbjct: 233 MTENSGIRKILPKSDICDFEFEPCGYSMNGIEGSAISTIHVTPEDGFSYASFE 285