Miyakogusa Predicted Gene

Lj6g3v1887820.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1887820.1 tr|Q063U4|Q063U4_9SYNE Possible cobalt transport
protein OS=Synechococcus sp. BL107 GN=BL107_15845
P,33.59,1e-18,CbiQ,ABC/ECF transporter, transmembrane component;
seg,NULL,CUFF.60121.1
         (374 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g021220.1 | cobalt ion transmembrane transporters protein ...   525   e-149
Medtr2g021155.1 | F-box protein interaction domain protein | LC ...    63   6e-10

>Medtr2g021220.1 | cobalt ion transmembrane transporters protein |
           HC | chr2:7181514-7176240 | 20130731
          Length = 375

 Score =  525 bits (1353), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 268/377 (71%), Positives = 291/377 (77%), Gaps = 5/377 (1%)

Query: 1   MSCNPATXXXXXXXXXXXXXXXKPPSAFPGLRKPLLAANVRRKRCFTIRASK---GQSVD 57
           M+CN AT               K    +P  +K LL  N++R     I+ASK   GQS +
Sbjct: 1   MNCNHATFLLVSLPPPPPLLFPK--FHYPVPKKTLLTLNLKRNPILRIKASKDDNGQSPN 58

Query: 58  WSQWLPTGSFAADKVFRLIAGATASPIGQFVSSPTTFLHSIDPRXXXXXXXXXXXXPSRS 117
           WS+W+PTGSFAADKVFRLI+ ATASPIGQFVSSPTTFLHSIDPR            P+RS
Sbjct: 59  WSKWIPTGSFAADKVFRLISSATASPIGQFVSSPTTFLHSIDPRVKLVWLLVLVVLPARS 118

Query: 118 HIIMRFGLVIYLTLLSIWVLPRSTWTDQLGRVYLLSGLLFITSGLGADGAPALVQLRTPP 177
           HIIMRFGLV YLTLLSIW+LPR+ W DQLGRVY LS LLFIT GLG+DG PALVQ RTPP
Sbjct: 119 HIIMRFGLVAYLTLLSIWILPRNAWKDQLGRVYFLSALLFITIGLGSDGVPALVQSRTPP 178

Query: 178 PAVTGLPNLPVSLTGYSYLISKLGPLTFTRKGLSVASTVACLTFTVFQSASLCLTTTTPE 237
           PAV+GLPNLP+SLTGYSY+ISKLGPLTFTRKGLSV STVACLTFTVFQSASLCLTTTTPE
Sbjct: 179 PAVSGLPNLPISLTGYSYVISKLGPLTFTRKGLSVGSTVACLTFTVFQSASLCLTTTTPE 238

Query: 238 QLAFALRWFMLPLRYXXXXXXXXXXXXXXXXXXXXXXFDEVRNLAMGIVSRRVNWKQLTV 297
           QLA ALRWFMLPLRY                      FDEVRN+A+GIVSRRVNWKQLTV
Sbjct: 239 QLASALRWFMLPLRYIGVSVSEIVLTLLLSLRFISLVFDEVRNIALGIVSRRVNWKQLTV 298

Query: 298 METIDIFFNYFRRIFKNIFSHAEQISQAMIVRGFKGDVGSQKIYFLSEPSFGMADIICLL 357
           METIDIFFNYFRRIFKNIFSHAEQISQAMI RGFKGDV + KIYFLSE SFGMADI+CLL
Sbjct: 299 METIDIFFNYFRRIFKNIFSHAEQISQAMIARGFKGDVDNHKIYFLSESSFGMADIVCLL 358

Query: 358 CLKIVIGAALLSEYYFV 374
            L +VIGA+LLSEYY V
Sbjct: 359 NLTVVIGASLLSEYYLV 375


>Medtr2g021155.1 | F-box protein interaction domain protein | LC |
           chr2:7162258-7155965 | 20130731
          Length = 958

 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 32/60 (53%), Positives = 39/60 (65%), Gaps = 3/60 (5%)

Query: 127 IYLTLLSIWVLPRSTWTDQLGRVYLLSGLLFITSGLGADGAPALVQLRTPPPAVTGLPNL 186
           +YL + S++        DQLG+VY L  LLFIT GLG+DG P LVQ RTPPPAV    N+
Sbjct: 429 VYLLIHSLYYFDHQ---DQLGQVYFLLALLFITLGLGSDGVPVLVQSRTPPPAVRDYKNI 485