Miyakogusa Predicted Gene

Lj6g3v1883500.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1883500.1 Non Characterized Hit- tr|I1RQP8|I1RQP8_GIBZE
Uncharacterized protein OS=Gibberella zeae (strain PH-,31.4,0.66,
,NODE_37468_length_769_cov_63.821846.path2.1
         (151 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g022190.1 | RING zinc finger protein, putative | HC | chr2...   246   5e-66
Medtr4g117270.1 | RING zinc finger protein, putative | HC | chr4...   213   6e-56

>Medtr2g022190.1 | RING zinc finger protein, putative | HC |
           chr2:7624515-7625283 | 20130731
          Length = 160

 Score =  246 bits (628), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 123/151 (81%), Positives = 129/151 (85%), Gaps = 3/151 (1%)

Query: 1   MRGLSLLSLGGCFDGCFDHTQACGLGTRIYNLSDRPVELQIRVGSILKKVHTLKPGSSKR 60
           MRGLSL SLGGCFD C+D TQA GLGTRI+NLSDRPVELQIRVGSILKKVH LKPGSSKR
Sbjct: 13  MRGLSLQSLGGCFDTCYDQTQAYGLGTRIWNLSDRPVELQIRVGSILKKVHILKPGSSKR 72

Query: 61  VKSKHIYKAYVPHAGRIRGSDVGGLKSLLYYYDETCHPYIWIHDIGGNSLRMVKQQYLSL 120
           VKSK IYK Y+P      GSD  G+KSLLYYYDETCHPYIWIHDI G+SLRMVKQQY+SL
Sbjct: 73  VKSKRIYKTYMPSRS---GSDNVGMKSLLYYYDETCHPYIWIHDIEGDSLRMVKQQYISL 129

Query: 121 EDLKEFSEIRILRDQQRGCISVCKRNRPDFC 151
           EDLK  SEIRILRD  RGCISVCKR RPD C
Sbjct: 130 EDLKMSSEIRILRDHHRGCISVCKRTRPDLC 160


>Medtr4g117270.1 | RING zinc finger protein, putative | HC |
           chr4:48594798-48593945 | 20130731
          Length = 164

 Score =  213 bits (542), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 107/152 (70%), Positives = 124/152 (81%), Gaps = 5/152 (3%)

Query: 1   MRGLSLLSLGGCFDGCFDHTQACGLGTRIYNLSDRPVELQIRVGSILKKVHTLKPGSSKR 60
           ++G SL SLGGCFDGC D  Q  G GTRI+NLSD+PVELQIRVGSILKK+HTLKPGSSKR
Sbjct: 15  VQGFSLPSLGGCFDGCRDQAQGSGFGTRIWNLSDKPVELQIRVGSILKKIHTLKPGSSKR 74

Query: 61  VKSKHIYKAYVPHAGRIRGSDVGGLKSLLYYYDETCHPYIWIHDIG-GNSLRMVKQQYLS 119
           +K K+IYKAY+P  G + G +   LK+LLY YDET HPYIWIHD G  NSL+MVKQQY+S
Sbjct: 75  LKCKNIYKAYMPRNGSV-GEN---LKNLLYSYDETSHPYIWIHDTGCHNSLKMVKQQYIS 130

Query: 120 LEDLKEFSEIRILRDQQRGCISVCKRNRPDFC 151
           LED+++ SEI+I RD QRG ISV KR RPDFC
Sbjct: 131 LEDMRDSSEIKIFRDHQRGSISVRKRMRPDFC 162