Miyakogusa Predicted Gene

Lj6g3v1883480.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1883480.1 Non Characterized Hit- tr|I3T392|I3T392_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,87.55,0,seg,NULL; UNCHARACTERIZED,NULL; SNARE_assoc,SNARE
associated Golgi protein,CUFF.60159.1
         (274 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g022180.1 | TVP38/TMEM64 family membrane slr0305-like prot...   418   e-117
Medtr4g117280.1 | TVP38/TMEM64 family membrane slr0305-like prot...   345   2e-95
Medtr4g117280.2 | TVP38/TMEM64 family membrane slr0305-like prot...   344   4e-95
Medtr4g032670.1 | SNARE associated family protein | HC | chr4:11...    78   1e-14

>Medtr2g022180.1 | TVP38/TMEM64 family membrane slr0305-like protein
           | HC | chr2:7614462-7621452 | 20130731
          Length = 274

 Score =  418 bits (1074), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 212/274 (77%), Positives = 226/274 (82%)

Query: 1   MAFSWASALRITLFXXXXXXXXXXCFTLPVEKMMKDFLLWVDHDLGPWGPLVLAVAYIPL 60
           MAFSWASA RITL           CFTLP+EK+MKDFLLWVD DLG WGPLVLAVAYIPL
Sbjct: 1   MAFSWASAFRITLLLLLLLAVIVACFTLPIEKIMKDFLLWVDRDLGAWGPLVLAVAYIPL 60

Query: 61  TVLAVPASVLTLGGGYLFGLPVGFVADSIGATLGAGAAFILGRTIGRSFVVSKLKDYPQF 120
           TVLAVPASVLTLGGGYLFGLPVGFVADSIGAT+GAGAAF+LGRTIGR FVVS+LKDYP+F
Sbjct: 61  TVLAVPASVLTLGGGYLFGLPVGFVADSIGATVGAGAAFLLGRTIGRPFVVSRLKDYPKF 120

Query: 121 RSVAIAIRRSGFKIXXXXXXXXXXXFNMLNYLLSVTPVSIGEYMLASWLGMMPITLALVY 180
           +SVAIAIRRSGFKI           FNMLNYLLSVTPVS+ EYMLASWLGMMPITLALVY
Sbjct: 121 KSVAIAIRRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVSLVEYMLASWLGMMPITLALVY 180

Query: 181 VGTTLKDLSDVTHGWSEFSKTRWAFIXXXXXXXXXXXXXXXXXAKSALDKALAENEDIDG 240
           VGTTLKDLSDVTHGW+EFSK+RWAFI                 AKSALDKALAENEDIDG
Sbjct: 181 VGTTLKDLSDVTHGWNEFSKSRWAFIIIGLIVSVVLMICVTKVAKSALDKALAENEDIDG 240

Query: 241 LTSSPELPIVAETSSDLSHPLIIKIDPTDENHEK 274
           +TSSPELPIVAE  SDL+ PLIIKID T++NHEK
Sbjct: 241 VTSSPELPIVAEPPSDLNQPLIIKIDSTEDNHEK 274


>Medtr4g117280.1 | TVP38/TMEM64 family membrane slr0305-like protein
           | HC | chr4:48600647-48596094 | 20130731
          Length = 294

 Score =  345 bits (886), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 177/275 (64%), Positives = 204/275 (74%), Gaps = 2/275 (0%)

Query: 1   MAFSWASALRITLFXXXXXXXXXXCFTLPVEKMMKDFLLWVDHDLGPWGPLVLAVAYIPL 60
           M  +W +AL+ITL           CFTLP+EK++KDFL+WVD DLGPWGPL LAVAYIPL
Sbjct: 21  MFLTWPNALKITLLLLLVSAIVVACFTLPIEKILKDFLIWVDQDLGPWGPLALAVAYIPL 80

Query: 61  TVLAVPASVLTLGGGYLFGLPVGFVADSIGATLGAGAAFILGRTIGRSFVVSKLKDYPQF 120
           T+LAVPASVLTLGGGYLFGLPVG VADS+GAT+GA AAF+LG TIG+SFV SKLKDYPQF
Sbjct: 81  TILAVPASVLTLGGGYLFGLPVGIVADSVGATIGAVAAFLLGGTIGKSFVASKLKDYPQF 140

Query: 121 RSVAIAIRRSGFKIXXXXXXXXXXXFNMLNYLLSVTPVSIGEYMLASWLGMMPITLALVY 180
           +SV+IA +RSGFKI           +N+LNYLLSVTPV + EY LASWLGMMP+T+ALVY
Sbjct: 141 KSVSIATQRSGFKIVFLLRLVPLLPYNILNYLLSVTPVPLWEYTLASWLGMMPLTVALVY 200

Query: 181 VGTTLKDLSDVTHGWSEFSKTRWAFIXXXXXXXXXXXXXXXXXAKSALDKALAENE-DID 239
            GTTLKD+SDVTHGW EFSKTRWA I                 AKSALDKALAE E D+D
Sbjct: 201 AGTTLKDISDVTHGWGEFSKTRWAMIIFSLVISVVMMICVTKVAKSALDKALAECEKDMD 260

Query: 240 GLTSSPELPIVAETSSDLSHPLIIKIDPTDENHEK 274
             TSS +L IV ETS  L+ PL+ +ID    N +K
Sbjct: 261 DTTSSEQL-IVTETSVGLNQPLVNEIDQDQANQQK 294


>Medtr4g117280.2 | TVP38/TMEM64 family membrane slr0305-like protein
           | HC | chr4:48600709-48596099 | 20130731
          Length = 274

 Score =  344 bits (883), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 177/275 (64%), Positives = 204/275 (74%), Gaps = 2/275 (0%)

Query: 1   MAFSWASALRITLFXXXXXXXXXXCFTLPVEKMMKDFLLWVDHDLGPWGPLVLAVAYIPL 60
           M  +W +AL+ITL           CFTLP+EK++KDFL+WVD DLGPWGPL LAVAYIPL
Sbjct: 1   MFLTWPNALKITLLLLLVSAIVVACFTLPIEKILKDFLIWVDQDLGPWGPLALAVAYIPL 60

Query: 61  TVLAVPASVLTLGGGYLFGLPVGFVADSIGATLGAGAAFILGRTIGRSFVVSKLKDYPQF 120
           T+LAVPASVLTLGGGYLFGLPVG VADS+GAT+GA AAF+LG TIG+SFV SKLKDYPQF
Sbjct: 61  TILAVPASVLTLGGGYLFGLPVGIVADSVGATIGAVAAFLLGGTIGKSFVASKLKDYPQF 120

Query: 121 RSVAIAIRRSGFKIXXXXXXXXXXXFNMLNYLLSVTPVSIGEYMLASWLGMMPITLALVY 180
           +SV+IA +RSGFKI           +N+LNYLLSVTPV + EY LASWLGMMP+T+ALVY
Sbjct: 121 KSVSIATQRSGFKIVFLLRLVPLLPYNILNYLLSVTPVPLWEYTLASWLGMMPLTVALVY 180

Query: 181 VGTTLKDLSDVTHGWSEFSKTRWAFIXXXXXXXXXXXXXXXXXAKSALDKALAENE-DID 239
            GTTLKD+SDVTHGW EFSKTRWA I                 AKSALDKALAE E D+D
Sbjct: 181 AGTTLKDISDVTHGWGEFSKTRWAMIIFSLVISVVMMICVTKVAKSALDKALAECEKDMD 240

Query: 240 GLTSSPELPIVAETSSDLSHPLIIKIDPTDENHEK 274
             TSS +L IV ETS  L+ PL+ +ID    N +K
Sbjct: 241 DTTSSEQL-IVTETSVGLNQPLVNEIDQDQANQQK 274


>Medtr4g032670.1 | SNARE associated family protein | HC |
           chr4:11261721-11269691 | 20130731
          Length = 331

 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 1/154 (0%)

Query: 29  PVEKMMKDFLLWVDHDLGPWGPLVLAVAYIPLTVLAVPASVLTLGGGYLFGLPVGFVADS 88
           P+   +  F  +++   G  G  +    Y  L +LA+PA  LT+  G LFG   G +  S
Sbjct: 127 PINTFLNQFSGFIE-GYGSAGYALFVAVYAGLEILAIPAIPLTMSAGLLFGSLTGTIIVS 185

Query: 89  IGATLGAGAAFILGRTIGRSFVVSKLKDYPQFRSVAIAIRRSGFKIXXXXXXXXXXXFNM 148
           I  T+ A  AF++ R   R  ++  ++   +F ++  AI  +GFK+           F++
Sbjct: 186 ISGTVAASVAFLIARYFARERILKLVEGNKKFLAIDKAIGENGFKVVTLLRLSPLLPFSL 245

Query: 149 LNYLLSVTPVSIGEYMLASWLGMMPITLALVYVG 182
            NYL  +T V    Y+L SWLGM+P T A V  G
Sbjct: 246 GNYLYGLTSVKFLPYVLGSWLGMLPGTWAYVSAG 279