Miyakogusa Predicted Gene

Lj6g3v1882470.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1882470.1 Non Characterized Hit- tr|I1M144|I1M144_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.36097
PE,63.43,0,SUBFAMILY NOT NAMED,NULL; MAHOGUNIN,NULL; RING/U-box,NULL;
Ring finger,Zinc finger, RING-type; ZF_RI,CUFF.60157.1
         (386 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g022210.1 | zinc finger, C3HC4 type (RING finger) protein ...   392   e-109
Medtr4g117250.1 | zinc finger, C3HC4 type (RING finger) protein ...   347   8e-96
Medtr1g064680.1 | E3 ubiquitin-protein ligase | HC | chr1:284641...   246   3e-65
Medtr7g101150.1 | E3 ubiquitin-protein ligase, putative | HC | c...   239   3e-63
Medtr7g101150.2 | E3 ubiquitin-protein ligase, putative | HC | c...   214   1e-55
Medtr2g437720.1 | zinc finger, C3HC4 type (RING finger) protein ...    52   8e-07
Medtr1g476030.1 | E3 ubiquitin-protein ligase XBAT35, putative |...    50   3e-06
Medtr1g476030.2 | E3 ubiquitin-protein ligase XBAT35, putative |...    50   3e-06

>Medtr2g022210.1 | zinc finger, C3HC4 type (RING finger) protein |
           HC | chr2:7631733-7637979 | 20130731
          Length = 386

 Score =  392 bits (1006), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 189/257 (73%), Positives = 212/257 (82%), Gaps = 9/257 (3%)

Query: 134 YVNHQTTKKIRSHVNVHKGTLRFELDDLKPHHYLVSFVFDAVYDGSITIIYFANEEERCR 193
           YV+HQT KKIR++VNVHK TLR E+D   P HYLVSFVFDAV+DGSIT+ YFA EE++CR
Sbjct: 130 YVDHQTAKKIRNNVNVHKDTLRLEVDQHNPDHYLVSFVFDAVFDGSITVFYFAKEEDKCR 189

Query: 194 FVPLFPDIFEPVRVPFQKGVGQKFVQPSGTGTDLSIFELDALTKSSPEEDAFPLIICAET 253
           FVPLFPD F PV+VPF+KGVGQKF QPSGTG DL  FELD L+K SP ED FPL+ICAET
Sbjct: 190 FVPLFPDAFVPVKVPFKKGVGQKFAQPSGTGIDLGFFELDDLSKPSPGEDVFPLVICAET 249

Query: 254 CAIDETPGHSMPGAHP-------PPHMQITQCVLQRSNGGGAFQIKVVRQILWIDGVRYE 306
           C   ETP  +     P        PHMQITQ VL++SNGGGAFQIKVVRQILWIDGVRYE
Sbjct: 250 CL--ETPSENETPKTPDDSVLDASPHMQITQAVLEKSNGGGAFQIKVVRQILWIDGVRYE 307

Query: 307 LRELYGIGSSGATDFDNSEPGKDCVICMIEPKDTAVLPCRHMCMCSECAKTLRLQSNKCP 366
           LRELYGIGSS A  FD+S+PGK+CVICM EPKDTAVLPCRHMC+CSECAK LRLQSNKCP
Sbjct: 308 LRELYGIGSSEAAGFDDSDPGKECVICMTEPKDTAVLPCRHMCLCSECAKALRLQSNKCP 367

Query: 367 ICRQSIEELIEIKMNNS 383
           ICRQ IEEL+EI++ +S
Sbjct: 368 ICRQPIEELMEIRVKSS 384


>Medtr4g117250.1 | zinc finger, C3HC4 type (RING finger) protein |
           HC | chr4:48587547-48585269 | 20130731
          Length = 358

 Score =  347 bits (891), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 167/253 (66%), Positives = 200/253 (79%), Gaps = 5/253 (1%)

Query: 134 YVNHQTTKKIRSHVNVHKGTLRFELDDLKPHHYLVSFVFDAVYDGSITIIYFANEEE-RC 192
           Y +H+T KK+R+ VN+HK TL+   D   P H+L+SFVFDA++ G ITI Y A EEE +C
Sbjct: 106 YTDHETAKKVRNDVNLHKHTLQLYQDPNNPDHHLISFVFDALFPGRITIFYIAREEEHQC 165

Query: 193 RFVPLFPDIFEPVRVPFQKGVGQKFVQPSGTGTDLSIFELDALTKSSPEEDAFPLIICAE 252
           RFVPLFP+ FEP+  PFQKGVGQKF QPSGTG DL  F+LD L+  SPEED FPL+ICAE
Sbjct: 166 RFVPLFPEAFEPITFPFQKGVGQKFCQPSGTGIDLGFFDLDDLSNPSPEEDIFPLVICAE 225

Query: 253 TCAIDE--TPGHSMPGAHPPPHMQITQCVLQRSNGGGAFQIKVVRQILWIDGVRYELREL 310
           +  + +  TP  S+  A P  HMQITQ VL++++  G+FQ+KVVRQILWID VRYELREL
Sbjct: 226 STPLQDHDTPVSSLADASP--HMQITQAVLEKNSDTGSFQVKVVRQILWIDQVRYELREL 283

Query: 311 YGIGSSGATDFDNSEPGKDCVICMIEPKDTAVLPCRHMCMCSECAKTLRLQSNKCPICRQ 370
           YGIG+S A DFD ++PGK+CVICM EPKDTAVLPCRHMCMC ECAK LR+QSN CPICRQ
Sbjct: 284 YGIGNSTAPDFDRNDPGKECVICMTEPKDTAVLPCRHMCMCGECAKALRVQSNNCPICRQ 343

Query: 371 SIEELIEIKMNNS 383
            IE+LIEIK+NN 
Sbjct: 344 PIEQLIEIKINND 356


>Medtr1g064680.1 | E3 ubiquitin-protein ligase | HC |
           chr1:28464133-28468044 | 20130731
          Length = 350

 Score =  246 bits (628), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 116/250 (46%), Positives = 167/250 (66%), Gaps = 6/250 (2%)

Query: 134 YVNHQTTKKIRSHVNVHKGTLRFELDDLKPHHYLVSFVFDAVYDGSITIIYFANEEERCR 193
           YV HQ    I++ VN+ K TL  E D+  P  +LV+F FDA   GSIT+++FA E + C 
Sbjct: 96  YVEHQKAVTIKNDVNIKKETLMIEPDEENPGSFLVTFTFDATVSGSITVLFFAKEGDGCV 155

Query: 194 FVPLFPDIFEPVRVPFQKGVGQKFVQPSGTGTDLSIFELDALTKSSPEEDAFPLIICAET 253
                 ++  PV + FQ+G+GQKF QP+GTG + S+FE   L K + + D +P+ + A+ 
Sbjct: 156 LTSTKENVLAPVTINFQQGLGQKFRQPAGTGINFSMFEESELLKVA-DMDIYPVAVKADA 214

Query: 254 CAIDETPGHSMPGAHPPPHM---QITQCVLQRSNGGGAFQIKVVRQILWIDGVRYELREL 310
            + D    +  P +    +    QITQ V ++  G   F++KV +QILW++G+RYEL+E+
Sbjct: 215 SSSDVEGSNETPISGNKTNTNNSQITQAVFEKEKG--EFRLKVAKQILWVNGMRYELQEI 272

Query: 311 YGIGSSGATDFDNSEPGKDCVICMIEPKDTAVLPCRHMCMCSECAKTLRLQSNKCPICRQ 370
           YGIG+S  +D D ++PGK+CVIC+ EP++T VLPCRHMCMCS CAK LR Q+N+CPICRQ
Sbjct: 273 YGIGTSVESDLDGNDPGKECVICLSEPRNTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQ 332

Query: 371 SIEELIEIKM 380
            +E L+EIK+
Sbjct: 333 PVERLLEIKV 342


>Medtr7g101150.1 | E3 ubiquitin-protein ligase, putative | HC |
           chr7:40818341-40812981 | 20130731
          Length = 352

 Score =  239 bits (611), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 120/247 (48%), Positives = 162/247 (65%), Gaps = 4/247 (1%)

Query: 134 YVNHQTTKKIRSHVNVHKGTLRFELDDLKPHHYLVSFVFDAVYDGSITIIYFANEEERCR 193
           +V HQ    IR+ VN+ K T+    D+  P  +LVSF FDA   GSITI +FA E+E C 
Sbjct: 106 FVEHQKAVTIRNDVNIKKETIVISPDEENPGFFLVSFTFDAAVSGSITIFFFAKEDEGCI 165

Query: 194 FVPLFPDIFEPVRVPFQKGVGQKFVQPSGTGTDLSIFELDALTKSSPEEDAFPLIICAET 253
             P       PV V FQ+G+GQKF Q +GTG + S+FE   L K   + D +PL + A+ 
Sbjct: 166 LTPTKETHLAPVTVQFQQGLGQKFRQQAGTGINFSMFEESDLVKVG-DVDVYPLAVKADA 224

Query: 254 CAIDETPGHSMPGAHPPPHMQITQCVLQRSNGGGAFQIKVVRQILWIDGVRYELRELYGI 313
            + D   G +       P+ QITQ V ++  G   F++KVV+QIL ++G+RYEL+E+YGI
Sbjct: 225 SS-DNHDGSNETETSSKPNSQITQAVFEKEKG--EFRVKVVKQILSVNGMRYELQEIYGI 281

Query: 314 GSSGATDFDNSEPGKDCVICMIEPKDTAVLPCRHMCMCSECAKTLRLQSNKCPICRQSIE 373
           G+S  +D D++E GK+CVIC+ EP+DT V PCRHMCMCS CAK LR Q+N+CPICRQ +E
Sbjct: 282 GNSVESDVDDNEQGKECVICLSEPRDTIVHPCRHMCMCSGCAKVLRFQTNRCPICRQPVE 341

Query: 374 ELIEIKM 380
            L+EIK+
Sbjct: 342 RLLEIKV 348


>Medtr7g101150.2 | E3 ubiquitin-protein ligase, putative | HC |
           chr7:40818051-40813135 | 20130731
          Length = 328

 Score =  214 bits (544), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 116/247 (46%), Positives = 152/247 (61%), Gaps = 28/247 (11%)

Query: 134 YVNHQTTKKIRSHVNVHKGTLRFELDDLKPHHYLVSFVFDAVYDGSITIIYFANEEERCR 193
           +V HQ    IR+ VN+ K T+    D+  P  +LVSF FDA   GSITI +FA E+E C 
Sbjct: 106 FVEHQKAVTIRNDVNIKKETIVISPDEENPGFFLVSFTFDAAVSGSITIFFFAKEDEGCI 165

Query: 194 FVPLFPDIFEPVRVPFQKGVGQKFVQPSGTGTDLSIFELDALTKSSPEEDAFPLIICAET 253
             P       PV V FQ+G+GQKF Q +GT       + DA   SS   D          
Sbjct: 166 LTPTKETHLAPVTVQFQQGLGQKFRQQAGT------VKADA---SSDNHDGS-------- 208

Query: 254 CAIDETPGHSMPGAHPPPHMQITQCVLQRSNGGGAFQIKVVRQILWIDGVRYELRELYGI 313
              +ET   S P +      QITQ V ++    G F++KVV+QIL ++G+RYEL+E+YGI
Sbjct: 209 ---NETETSSKPNS------QITQAVFEKEK--GEFRVKVVKQILSVNGMRYELQEIYGI 257

Query: 314 GSSGATDFDNSEPGKDCVICMIEPKDTAVLPCRHMCMCSECAKTLRLQSNKCPICRQSIE 373
           G+S  +D D++E GK+CVIC+ EP+DT V PCRHMCMCS CAK LR Q+N+CPICRQ +E
Sbjct: 258 GNSVESDVDDNEQGKECVICLSEPRDTIVHPCRHMCMCSGCAKVLRFQTNRCPICRQPVE 317

Query: 374 ELIEIKM 380
            L+EIK+
Sbjct: 318 RLLEIKV 324


>Medtr2g437720.1 | zinc finger, C3HC4 type (RING finger) protein |
           HC | chr2:14865351-14860695 | 20130731
          Length = 915

 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 33/53 (62%)

Query: 329 DCVICMIEPKDTAVLPCRHMCMCSECAKTLRLQSNKCPICRQSIEELIEIKMN 381
           +C IC     D+ +  C HMC C +CA  LR  + KCPICR +I++++ + ++
Sbjct: 862 NCCICNEMKVDSVLYRCGHMCACLKCANDLRWNNGKCPICRANIDDVVRVYLD 914


>Medtr1g476030.1 | E3 ubiquitin-protein ligase XBAT35, putative | HC
           | chr1:33694006-33687085 | 20130731
          Length = 459

 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 18/52 (34%), Positives = 31/52 (59%)

Query: 327 GKDCVICMIEPKDTAVLPCRHMCMCSECAKTLRLQSNKCPICRQSIEELIEI 378
           G  CVIC+  P + A +PC H+  C  C   ++ +   CP+CR  I+++I++
Sbjct: 405 GSTCVICLDAPAEGACIPCGHVAGCMSCLNEVKTKKWGCPVCRAKIDQIIKL 456


>Medtr1g476030.2 | E3 ubiquitin-protein ligase XBAT35, putative | HC
           | chr1:33693222-33687139 | 20130731
          Length = 392

 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 18/52 (34%), Positives = 31/52 (59%)

Query: 327 GKDCVICMIEPKDTAVLPCRHMCMCSECAKTLRLQSNKCPICRQSIEELIEI 378
           G  CVIC+  P + A +PC H+  C  C   ++ +   CP+CR  I+++I++
Sbjct: 338 GSTCVICLDAPAEGACIPCGHVAGCMSCLNEVKTKKWGCPVCRAKIDQIIKL 389