Miyakogusa Predicted Gene

Lj6g3v1880240.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1880240.1 Non Characterized Hit- tr|I1M137|I1M137_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.6764 PE=,91.21,0,ilvD:
dihydroxy-acid dehydratase,Dihydroxy-acid dehydratase; DIHYDROXY-ACID
DEHYDRATASE (DAD),Dihydr,CUFF.60055.1
         (594 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g089340.1 | dihydroxyacid dehydratase | HC | chr2:37744858...  1069   0.0  

>Medtr2g089340.1 | dihydroxyacid dehydratase | HC |
           chr2:37744858-37752770 | 20130731
          Length = 598

 Score = 1069 bits (2764), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 520/599 (86%), Positives = 556/599 (92%), Gaps = 6/599 (1%)

Query: 1   MQSTLFSPTISPLLPTLSHSHPRR-TVRASVA----AVETQTKLNKYSSRITEPKSQGAS 55
           MQSTLFSPT + L PT + +  RR +V++S++    ++E  TKLNKYSSRITEPKSQGAS
Sbjct: 1   MQSTLFSPTYTALFPTHTPTPSRRISVKSSISTNPPSIEP-TKLNKYSSRITEPKSQGAS 59

Query: 56  QAVLYGVGLSEDDMTKPQVGVSSVWYEGNTCNMHLLDLSEAVREGVAQAGMIPFRFNTIG 115
           QA+LYGVGLS+ D+ KPQVGVSSVWYEGNTCNMHLL LSEAV+EGVA+AGMIPFRFNTIG
Sbjct: 60  QAILYGVGLSDADLKKPQVGVSSVWYEGNTCNMHLLHLSEAVKEGVAEAGMIPFRFNTIG 119

Query: 116 VSDAISMGTRGMCYSLQSRDLIADSIETVMAAQWYDANISIPGCDKNMPGTIIAMGRLNR 175
           VSDAISMGTRGMCYSLQSRDLIADSIETVMAAQWYD NISIPGCDKNMPGTIIAMGRLNR
Sbjct: 120 VSDAISMGTRGMCYSLQSRDLIADSIETVMAAQWYDGNISIPGCDKNMPGTIIAMGRLNR 179

Query: 176 PSIMIYGGTIKPGHHQGNTYDIVSAFQCYGEYVSGSISDAQRQSVIRNSCPGAGACGGMY 235
           PSIM+YGGTIKPGH QG+T+DIVSAFQ YGEYVSGSISD  RQ+VIRNSCPGAGACGGMY
Sbjct: 180 PSIMVYGGTIKPGHFQGDTFDIVSAFQIYGEYVSGSISDEHRQNVIRNSCPGAGACGGMY 239

Query: 236 TANTMASAIEAMGMSIPYSSSTPAEDPLKLDECRLAGKYILELLKMDLKPRDIITRKSLR 295
           TANTMASAIEAMGMS+PYSSSTPAEDPLKLDECRLAGKY+LELLKMDLKPRDIITRKSLR
Sbjct: 240 TANTMASAIEAMGMSLPYSSSTPAEDPLKLDECRLAGKYLLELLKMDLKPRDIITRKSLR 299

Query: 296 NAMVIVMALGGSTNAVLHLIAIAKSVGIDLTLDDFQKVSDEVPFLADLKPSGKYVMEDVH 355
           NAMVIVMALGGSTNAVLHLIAIAKSVGI+LTLDDFQKVSDEVPF+ADLKPSGKYVMEDVH
Sbjct: 300 NAMVIVMALGGSTNAVLHLIAIAKSVGIELTLDDFQKVSDEVPFIADLKPSGKYVMEDVH 359

Query: 356 KIGGTPAVMRYLLEQGFLDGDCMTVTGKTLAENTELVPPLAKGQEIIRPIDNPIKKTAHI 415
           KIGGTPAV+RYLLEQGFLDGDCMTVTGKTLAEN EL PPL++GQEIIRPI+NPIKKTAHI
Sbjct: 360 KIGGTPAVIRYLLEQGFLDGDCMTVTGKTLAENAELFPPLSEGQEIIRPIENPIKKTAHI 419

Query: 416 QILYGNLAPQGSVAKITGKEGLYFSGPALVFEGEEAMISAISEDPSSFKGKVVVIRXXXX 475
           QILYGNLAPQGSVAKITGKEGLYFSGPALVFEGEEAMI+AISE+P SFKGKVV+IR    
Sbjct: 420 QILYGNLAPQGSVAKITGKEGLYFSGPALVFEGEEAMIAAISENPLSFKGKVVIIRGEGP 479

Query: 476 XXXXXXXXXLTPTSAIMGAGLGKDVALLTDGRFSGGSHGFVVGHICPEAQEGGPIGLIQN 535
                    LTPTSAIMGAGLGKDVALLTDGRFSGGSHGFVVGHICPEAQEGGPIGL+QN
Sbjct: 480 KGGPGMPEMLTPTSAIMGAGLGKDVALLTDGRFSGGSHGFVVGHICPEAQEGGPIGLVQN 539

Query: 536 GDVINVDIKNRRIDVLVPDEEMEARRKKWTAPPYKANQGALYKYIKNVTNASRGCVTDE 594
           GDVINVD+KN+RIDV+V DEEMEAR+KKW+APPYKANQG LYKYIKNV  AS GCVTDE
Sbjct: 540 GDVINVDVKNKRIDVIVSDEEMEARKKKWSAPPYKANQGVLYKYIKNVKPASSGCVTDE 598