Miyakogusa Predicted Gene

Lj6g3v1880140.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1880140.1 Non Characterized Hit- tr|I1M133|I1M133_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,43.55,1e-35,Histone-fold,Histone-fold; no
description,Histone-fold; CBFD_NFYB_HMF,Transcription factor
CBF/NF-Y/,CUFF.60046.1
         (318 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g023340.1 | core histone H2A/H2B/H3/H4 | LC | chr2:8235750...   147   2e-35
Medtr7g113680.1 | nuclear transcription factor Y protein | HC | ...   142   6e-34
Medtr3g099180.2 | nuclear transcription factor Y protein | HC | ...   140   2e-33
Medtr3g099180.1 | nuclear transcription factor Y protein | HC | ...   140   2e-33
Medtr1g082660.1 | nuclear transcription factor Y protein | HC | ...   137   1e-32
Medtr1g082660.2 | nuclear transcription factor Y protein | HC | ...   137   1e-32
Medtr2g081600.1 | nuclear transcription factor Y protein | HC | ...    91   2e-18
Medtr2g081630.1 | nuclear transcription factor Y protein | HC | ...    91   2e-18
Medtr8g041420.1 | negative cofactor 2 transcriptional co-repress...    64   2e-10
Medtr3g012030.2 | negative cofactor 2 transcriptional co-repress...    63   4e-10
Medtr5g088760.2 | negative cofactor 2 transcriptional co-repress...    59   8e-09
Medtr5g088760.3 | negative cofactor 2 transcriptional co-repress...    54   2e-07
Medtr3g085430.1 | nuclear transcription factor Y protein | HC | ...    51   2e-06

>Medtr2g023340.1 | core histone H2A/H2B/H3/H4 | LC |
           chr2:8235750-8235016 | 20130731
          Length = 244

 Score =  147 bits (370), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 67/112 (59%), Positives = 87/112 (77%), Gaps = 1/112 (0%)

Query: 74  FWETKCKEIENPIDF-NHAFPLARIKKIMKADPNVNSVAADAPVLFSKVCEMFIMDLTMR 132
           FW  + +E+E  +DF N+  PLARIKKIMKA+  V+ ++A+AP+LF+K CEMFIM+L  R
Sbjct: 67  FWAKQNEEVEKVVDFRNNGLPLARIKKIMKAEEGVSMISAEAPILFAKACEMFIMELATR 126

Query: 133 AWMNAEENKRRTLQTSDIASAISRTEVFDFLVGIVPKDEKMEHDVYAGIPPR 184
           +W NAE NKR+TLQ SDIASA+S  EVFDFLV IVP++  ME D++ GIP R
Sbjct: 127 SWANAEVNKRKTLQKSDIASAVSSNEVFDFLVDIVPRENTMERDIFMGIPRR 178


>Medtr7g113680.1 | nuclear transcription factor Y protein | HC |
           chr7:46853507-46850661 | 20130731
          Length = 311

 Score =  142 bits (357), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 66/114 (57%), Positives = 91/114 (79%), Gaps = 2/114 (1%)

Query: 73  NFWETKCKEIENPIDF-NHAFPLARIKKIMKADPNVNSVAADAPVLFSKVCEMFIMDLTM 131
           +FW  + +EIE   DF NH+ PLARIKKIMKAD +V  ++A+APV+F++ CEMFI++LT+
Sbjct: 133 SFWSNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTL 192

Query: 132 RAWMNAEENKRRTLQTSDIASAISRTEVFDFLVGIVPKDEKMEHDVYAGIPPRT 185
           R+W + EENKRRTLQ +DIA+AI+RT++FDFLV IVP+ E ++ +V A IP  T
Sbjct: 193 RSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPR-EDLKDEVLASIPRGT 245


>Medtr3g099180.2 | nuclear transcription factor Y protein | HC |
           chr3:45466714-45470003 | 20130731
          Length = 218

 Score =  140 bits (353), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 63/99 (63%), Positives = 85/99 (85%), Gaps = 1/99 (1%)

Query: 74  FWETKCKEIENPIDF-NHAFPLARIKKIMKADPNVNSVAADAPVLFSKVCEMFIMDLTMR 132
           FW  + +EIE+  DF NH  PLARIKKIMKAD +V  ++A+AP+LF+K CE+FI++LT+R
Sbjct: 37  FWSYQRQEIEHVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIR 96

Query: 133 AWMNAEENKRRTLQTSDIASAISRTEVFDFLVGIVPKDE 171
           +W++AEENKRRTLQ +DIA+AI+RT++FDFLV IVP+DE
Sbjct: 97  SWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDE 135


>Medtr3g099180.1 | nuclear transcription factor Y protein | HC |
           chr3:45466751-45470003 | 20130731
          Length = 217

 Score =  140 bits (353), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 63/99 (63%), Positives = 85/99 (85%), Gaps = 1/99 (1%)

Query: 74  FWETKCKEIENPIDF-NHAFPLARIKKIMKADPNVNSVAADAPVLFSKVCEMFIMDLTMR 132
           FW  + +EIE+  DF NH  PLARIKKIMKAD +V  ++A+AP+LF+K CE+FI++LT+R
Sbjct: 37  FWSYQRQEIEHVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIR 96

Query: 133 AWMNAEENKRRTLQTSDIASAISRTEVFDFLVGIVPKDE 171
           +W++AEENKRRTLQ +DIA+AI+RT++FDFLV IVP+DE
Sbjct: 97  SWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDE 135


>Medtr1g082660.1 | nuclear transcription factor Y protein | HC |
           chr1:36798252-36800703 | 20130731
          Length = 256

 Score =  137 bits (346), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 64/110 (58%), Positives = 88/110 (80%), Gaps = 2/110 (1%)

Query: 74  FWETKCKEIENPIDF-NHAFPLARIKKIMKADPNVNSVAADAPVLFSKVCEMFIMDLTMR 132
           FW  + +EIE   DF NH+ PLARIKKIMKAD +V  ++A+APV+F++ CEMFI++LT+R
Sbjct: 83  FWGNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVKMISAEAPVVFARACEMFILELTLR 142

Query: 133 AWMNAEENKRRTLQTSDIASAISRTEVFDFLVGIVPKDEKMEHDVYAGIP 182
           +W + EENKRRTLQ +DIA+AI+ T++FDFLV IVP+ E ++ +V A IP
Sbjct: 143 SWNHTEENKRRTLQKNDIAAAITGTDIFDFLVDIVPR-EDLKDEVLASIP 191


>Medtr1g082660.2 | nuclear transcription factor Y protein | HC |
           chr1:36798518-36800703 | 20130731
          Length = 256

 Score =  137 bits (346), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 64/110 (58%), Positives = 88/110 (80%), Gaps = 2/110 (1%)

Query: 74  FWETKCKEIENPIDF-NHAFPLARIKKIMKADPNVNSVAADAPVLFSKVCEMFIMDLTMR 132
           FW  + +EIE   DF NH+ PLARIKKIMKAD +V  ++A+APV+F++ CEMFI++LT+R
Sbjct: 83  FWGNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVKMISAEAPVVFARACEMFILELTLR 142

Query: 133 AWMNAEENKRRTLQTSDIASAISRTEVFDFLVGIVPKDEKMEHDVYAGIP 182
           +W + EENKRRTLQ +DIA+AI+ T++FDFLV IVP+ E ++ +V A IP
Sbjct: 143 SWNHTEENKRRTLQKNDIAAAITGTDIFDFLVDIVPR-EDLKDEVLASIP 191


>Medtr2g081600.1 | nuclear transcription factor Y protein | HC |
           chr2:34243690-34243268 | 20130731
          Length = 119

 Score = 90.9 bits (224), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 41/83 (49%), Positives = 60/83 (72%), Gaps = 1/83 (1%)

Query: 90  HAFPLARIKKIMK-ADPNVNSVAADAPVLFSKVCEMFIMDLTMRAWMNAEENKRRTLQTS 148
           H+ PLARIKKIMK +  +V  ++  AP++FSK CE+FI +LT R+W+ A + KRRTL   
Sbjct: 21  HSLPLARIKKIMKNSSEDVKMISGVAPIVFSKACELFIEELTRRSWIMAIDAKRRTLNKE 80

Query: 149 DIASAISRTEVFDFLVGIVPKDE 171
           D+ASA+  T++FDFL+ +V   +
Sbjct: 81  DVASAVIATDIFDFLITLVSNSD 103


>Medtr2g081630.1 | nuclear transcription factor Y protein | HC |
           chr2:34260235-34259869 | 20130731
          Length = 117

 Score = 90.5 bits (223), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 41/83 (49%), Positives = 60/83 (72%), Gaps = 1/83 (1%)

Query: 90  HAFPLARIKKIMK-ADPNVNSVAADAPVLFSKVCEMFIMDLTMRAWMNAEENKRRTLQTS 148
           H+ PLARIKKIMK +  +V  ++  AP++FSK CE+FI +LT R+W+ A + KRRTL   
Sbjct: 21  HSLPLARIKKIMKNSSEDVKMISGVAPIVFSKACELFIEELTRRSWIMAIDAKRRTLNKE 80

Query: 149 DIASAISRTEVFDFLVGIVPKDE 171
           D+ASA+  T++FDFL+ +V   +
Sbjct: 81  DVASAVIATDIFDFLITLVSNSD 103


>Medtr8g041420.1 | negative cofactor 2 transcriptional co-repressor,
           putative | HC | chr8:15595067-15590978 | 20130731
          Length = 305

 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 44/78 (56%)

Query: 92  FPLARIKKIMKADPNVNSVAADAPVLFSKVCEMFIMDLTMRAWMNAEENKRRTLQTSDIA 151
           FP ARIKKIM+AD +V  +A   PVL SK  E+F+ DL  R +    +   +T+ +  + 
Sbjct: 9   FPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLK 68

Query: 152 SAISRTEVFDFLVGIVPK 169
             +    VFDFL  +V K
Sbjct: 69  HCVQSYNVFDFLKDVVSK 86


>Medtr3g012030.2 | negative cofactor 2 transcriptional co-repressor,
           putative | HC | chr3:3186291-3181373 | 20130731
          Length = 292

 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 43/78 (55%)

Query: 92  FPLARIKKIMKADPNVNSVAADAPVLFSKVCEMFIMDLTMRAWMNAEENKRRTLQTSDIA 151
           FP ARIKKIM+AD +V  +A   PVL SK  E+F+ DL  R +    +   +T+    + 
Sbjct: 9   FPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNALHLK 68

Query: 152 SAISRTEVFDFLVGIVPK 169
             +    VFDFL  IV +
Sbjct: 69  HCVQSYNVFDFLRDIVSR 86


>Medtr5g088760.2 | negative cofactor 2 transcriptional co-repressor,
           putative | HC | chr5:38540164-38543606 | 20130731
          Length = 302

 Score = 58.5 bits (140), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 42/82 (51%)

Query: 88  FNHAFPLARIKKIMKADPNVNSVAADAPVLFSKVCEMFIMDLTMRAWMNAEENKRRTLQT 147
            +  FP ARIKKIM+AD ++  +A   P+L SK  E+F+ DL  R +        +T+  
Sbjct: 5   LDTRFPAARIKKIMQADEDIGKIALAVPLLVSKALELFLQDLCDRTYEITLGRGAKTVNA 64

Query: 148 SDIASAISRTEVFDFLVGIVPK 169
             +   I    VFDFL   V K
Sbjct: 65  FHLKQCIQTCNVFDFLKDTVSK 86


>Medtr5g088760.3 | negative cofactor 2 transcriptional co-repressor,
           putative | HC | chr5:38540164-38543606 | 20130731
          Length = 293

 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 39/75 (52%)

Query: 95  ARIKKIMKADPNVNSVAADAPVLFSKVCEMFIMDLTMRAWMNAEENKRRTLQTSDIASAI 154
           ARIKKIM+AD ++  +A   P+L SK  E+F+ DL  R +        +T+    +   I
Sbjct: 3   ARIKKIMQADEDIGKIALAVPLLVSKALELFLQDLCDRTYEITLGRGAKTVNAFHLKQCI 62

Query: 155 SRTEVFDFLVGIVPK 169
               VFDFL   V K
Sbjct: 63  QTCNVFDFLKDTVSK 77


>Medtr3g085430.1 | nuclear transcription factor Y protein | HC |
           chr3:38611793-38612780 | 20130731
          Length = 173

 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 50/89 (56%), Gaps = 1/89 (1%)

Query: 81  EIENPIDFNHAFPLARIKKIMKADPNVNSVAADAPVLFSKVCEMFIMDLTMRAWMNAEEN 140
           E E  + F   FP +R+KKI+  D +V  V+++A  L S+  E+F+  L  ++   A E 
Sbjct: 21  EEEKTLSFEPEFPKSRVKKIITLDKDVKRVSSEALFLVSRSTELFLQLLAEKSAEVAIEK 80

Query: 141 KRRTLQTSDIASAISRTE-VFDFLVGIVP 168
           KR+T++   +  A+ R   + DFL+  +P
Sbjct: 81  KRKTVKLEHMRIAVKRNRPISDFLLDSLP 109