Miyakogusa Predicted Gene

Lj6g3v1880100.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1880100.3 Non Characterized Hit- tr|K4AXM8|K4AXM8_SOLLC
Uncharacterized protein OS=Solanum lycopersicum GN=Sol,46.34,4e-19,
,CUFF.60056.3
         (119 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g022610.1 | hypothetical protein | HC | chr2:7835123-78362...   137   3e-33
Medtr4g131720.1 | hypothetical protein | HC | chr4:54952002-5495...   136   4e-33

>Medtr2g022610.1 | hypothetical protein | HC | chr2:7835123-7836296
           | 20130731
          Length = 115

 Score =  137 bits (344), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 80/116 (68%), Positives = 94/116 (81%), Gaps = 6/116 (5%)

Query: 1   MELEDDLYFADLSKEIALLLMDEHEDPLASYPADSLQVFPGAIQYPPPQFAFLYEQALRR 60
           +E+EDDL+FA+LSKEIALL+MDE EDPLAS P +SLQ F  AI +PPPQF F YEQAL R
Sbjct: 5   LEMEDDLFFANLSKEIALLIMDEDEDPLASQPPNSLQDFSRAI-HPPPQFDFFYEQALIR 63

Query: 61  DQSKGTGVFIPQATQPIRRKQRKGRYNNSYSANYQKQSQDTTIMASQAPPIKDSLK 116
            +SKGTGVFIPQATQP RR+ +KGR +NS+S  YQKQSQDT  M SQ P  K+S+K
Sbjct: 64  RESKGTGVFIPQATQP-RRRYKKGR-SNSFS-KYQKQSQDTR-MISQVPN-KNSIK 114


>Medtr4g131720.1 | hypothetical protein | HC |
           chr4:54952002-54953188 | 20130731
          Length = 117

 Score =  136 bits (343), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 74/107 (69%), Positives = 84/107 (78%), Gaps = 3/107 (2%)

Query: 1   MELEDDLYFADLSKEIALLLMDEHEDPLASYPADSLQVFPGAIQYPPPQFAFLYEQALRR 60
           +ELEDDLYFADLSK+I+LL+MDE EDPL S+P+ SLQ F GAI +PPPQ  FLYEQ   R
Sbjct: 5   VELEDDLYFADLSKQISLLIMDEDEDPLTSHPSHSLQSFSGAI-HPPPQSNFLYEQMALR 63

Query: 61  DQSKGTGVFIPQATQPIRRKQRKGRYNNSYSANYQKQSQDTTIMASQ 107
            QSKGTGVFIPQ+T   RRK RKGR ++SY A  QKQSQDTT   SQ
Sbjct: 64  RQSKGTGVFIPQSTTQPRRKHRKGR-SSSY-AKCQKQSQDTTRTVSQ 108