Miyakogusa Predicted Gene
- Lj6g3v1879850.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1879850.1 Non Characterized Hit- tr|I1MR67|I1MR67_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,78.1,0,FAMILY NOT
NAMED,NULL; DUF1084,Domain of unknown function DUF1084;
seg,NULL,CUFF.60026.1
(294 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g131930.1 | tobamovirus multiplication-like protein | HC |... 413 e-116
Medtr2g022880.1 | tobamovirus multiplication-like protein | HC |... 409 e-114
Medtr4g094212.1 | tobamovirus multiplication-like protein | HC |... 373 e-104
Medtr4g094212.2 | tobamovirus multiplication-like protein | HC |... 373 e-104
Medtr4g131930.2 | tobamovirus multiplication-like protein | HC |... 338 4e-93
Medtr1g033830.1 | tobamovirus multiplication-like protein | HC |... 330 7e-91
Medtr2g022880.2 | tobamovirus multiplication-like protein | HC |... 314 7e-86
Medtr1g033830.2 | tobamovirus multiplication-like protein | HC |... 219 2e-57
Medtr4g096650.2 | plant/F17J16-140 protein | HC | chr4:38446874-... 49 6e-06
Medtr4g096650.1 | plant/F17J16-140 protein | HC | chr4:38446874-... 49 7e-06
>Medtr4g131930.1 | tobamovirus multiplication-like protein | HC |
chr4:55083666-55089675 | 20130731
Length = 278
Score = 413 bits (1062), Expect = e-116, Method: Compositional matrix adjust.
Identities = 192/267 (71%), Positives = 226/267 (84%)
Query: 28 DHISDSTQWQSALFYSLCAAYALISSVALIQLIRIELRVPEYGWTTQKIFHLMNFIVSGV 87
+ I+ +T WQS++FY + +AYA++S VAL QL+RI+LRVPEYGWTTQKIFHLMNFI++GV
Sbjct: 12 EDIAATTSWQSSIFYFISSAYAVVSFVALFQLVRIQLRVPEYGWTTQKIFHLMNFILNGV 71
Query: 88 RALVFGFHTKVFTLHPKXXXXXXXXXXXXXYFSTYTLLVLFWAEIYHQARSLPTDKLKIV 147
RALVFG HT +F HPK +FSTYTLLVLFWAEIYHQARSLPTD LKI+
Sbjct: 72 RALVFGLHTLLFLFHPKVFVLVLLDLPGLLFFSTYTLLVLFWAEIYHQARSLPTDMLKII 131
Query: 148 YVSVNGVVYFIQVCIWIYIWIDDNSVAELIGQIFIGAVSFIAAIGFLIYGGRLFSMLRRF 207
Y+S+N +Y IQ+CIWIY+W DDNSV E G+IFIG VSF+AA+GFL+YGGRLF MLR F
Sbjct: 132 YISINAALYIIQICIWIYLWTDDNSVVEFFGKIFIGGVSFVAALGFLLYGGRLFCMLRHF 191
Query: 208 PIESKGRRKKLNEVGCVTAICFTCFLIRCLMVFISAFDSDASLDVLDHPILDFIYYMLVE 267
PIESKGRRKKL+EVG +TAICFTCFLIRC+M F+SAFDSD SLDVLDHPILD +YYMLVE
Sbjct: 192 PIESKGRRKKLHEVGSITAICFTCFLIRCVMGFLSAFDSDTSLDVLDHPILDLVYYMLVE 251
Query: 268 IVPSALVLFILRKLPPKRISAQYHPIR 294
++PSALVL+ILRKLPP+RISAQYH I
Sbjct: 252 VLPSALVLYILRKLPPRRISAQYHAIH 278
>Medtr2g022880.1 | tobamovirus multiplication-like protein | HC |
chr2:7962710-7966725 | 20130731
Length = 284
Score = 409 bits (1051), Expect = e-114, Method: Compositional matrix adjust.
Identities = 201/263 (76%), Positives = 223/263 (84%), Gaps = 2/263 (0%)
Query: 32 DSTQWQSALFYSLCAAYALISSVALIQLIRIELRVPEYGWTTQKIFHLMNFIVSGVRALV 91
DST S LFY+LCA+++LIS +ALIQLIRIELRVPEYGWTTQKIFHL NFIVSGVRALV
Sbjct: 24 DSTH--SPLFYTLCASFSLISFIALIQLIRIELRVPEYGWTTQKIFHLFNFIVSGVRALV 81
Query: 92 FGFHTKVFTLHPKXXXXXXXXXXXXXYFSTYTLLVLFWAEIYHQARSLPTDKLKIVYVSV 151
FGFH +VF LHPK +FSTYTLLVLFWAEIYHQARSLPTDKL+I+Y+SV
Sbjct: 82 FGFHAQVFFLHPKVLTLVLLDLPGLVFFSTYTLLVLFWAEIYHQARSLPTDKLRIIYISV 141
Query: 152 NGVVYFIQVCIWIYIWIDDNSVAELIGQIFIGAVSFIAAIGFLIYGGRLFSMLRRFPIES 211
NG VY IQV WIY+W+D N V + IG+IFI VSF+AAIGFLI+GGRLF ML+RFPIES
Sbjct: 142 NGAVYLIQVGFWIYLWLDYNDVVDFIGKIFIAGVSFVAAIGFLIFGGRLFFMLKRFPIES 201
Query: 212 KGRRKKLNEVGCVTAICFTCFLIRCLMVFISAFDSDASLDVLDHPILDFIYYMLVEIVPS 271
KGRRKKL EVG VT ICFTCFLIR +MV +SA DSDASLDVLDHPILDFIYYM+VEI+PS
Sbjct: 202 KGRRKKLQEVGFVTIICFTCFLIRSVMVLVSAVDSDASLDVLDHPILDFIYYMVVEILPS 261
Query: 272 ALVLFILRKLPPKRISAQYHPIR 294
A+VLFILRKLPPKRISAQYH I
Sbjct: 262 AIVLFILRKLPPKRISAQYHDIH 284
>Medtr4g094212.1 | tobamovirus multiplication-like protein | HC |
chr4:37446139-37449467 | 20130731
Length = 289
Score = 373 bits (958), Expect = e-104, Method: Compositional matrix adjust.
Identities = 172/269 (63%), Positives = 212/269 (78%)
Query: 26 WWDHISDSTQWQSALFYSLCAAYALISSVALIQLIRIELRVPEYGWTTQKIFHLMNFIVS 85
WW+ I DS QWQ ++Y+LCAAYA +S +ALIQL+RI++RVPEYGWTTQK+FHLMNF+V+
Sbjct: 21 WWNDIDDSDQWQRGIYYTLCAAYATVSFIALIQLVRIQMRVPEYGWTTQKVFHLMNFLVN 80
Query: 86 GVRALVFGFHTKVFTLHPKXXXXXXXXXXXXXYFSTYTLLVLFWAEIYHQARSLPTDKLK 145
GVRA++FG + VF + PK +FSTYTLLVLFWAEIYHQARS P KL+
Sbjct: 81 GVRAVLFGLYKSVFAIRPKVFEQVLMEVPGLLFFSTYTLLVLFWAEIYHQARSEPAQKLR 140
Query: 146 IVYVSVNGVVYFIQVCIWIYIWIDDNSVAELIGQIFIGAVSFIAAIGFLIYGGRLFSMLR 205
Y S+NGVVY IQ+CIWIY+ ++F+ +SF AA+GFL+YGGRLF +LR
Sbjct: 141 PAYFSINGVVYLIQICIWIYMTASKTVAGIEAAKLFLAVISFCAALGFLLYGGRLFFLLR 200
Query: 206 RFPIESKGRRKKLNEVGCVTAICFTCFLIRCLMVFISAFDSDASLDVLDHPILDFIYYML 265
RFPIES+GR+KKL EVG VT+IC TCFLIRC+++ ISAFD +A LDVL HP+L+ +YY+L
Sbjct: 201 RFPIESRGRQKKLYEVGSVTSICCTCFLIRCVLLAISAFDQEADLDVLSHPMLNLVYYLL 260
Query: 266 VEIVPSALVLFILRKLPPKRISAQYHPIR 294
VEIVPSALVLFILRKLPPKR+S QYHPIR
Sbjct: 261 VEIVPSALVLFILRKLPPKRVSDQYHPIR 289
>Medtr4g094212.2 | tobamovirus multiplication-like protein | HC |
chr4:37446151-37449551 | 20130731
Length = 289
Score = 373 bits (958), Expect = e-104, Method: Compositional matrix adjust.
Identities = 172/269 (63%), Positives = 212/269 (78%)
Query: 26 WWDHISDSTQWQSALFYSLCAAYALISSVALIQLIRIELRVPEYGWTTQKIFHLMNFIVS 85
WW+ I DS QWQ ++Y+LCAAYA +S +ALIQL+RI++RVPEYGWTTQK+FHLMNF+V+
Sbjct: 21 WWNDIDDSDQWQRGIYYTLCAAYATVSFIALIQLVRIQMRVPEYGWTTQKVFHLMNFLVN 80
Query: 86 GVRALVFGFHTKVFTLHPKXXXXXXXXXXXXXYFSTYTLLVLFWAEIYHQARSLPTDKLK 145
GVRA++FG + VF + PK +FSTYTLLVLFWAEIYHQARS P KL+
Sbjct: 81 GVRAVLFGLYKSVFAIRPKVFEQVLMEVPGLLFFSTYTLLVLFWAEIYHQARSEPAQKLR 140
Query: 146 IVYVSVNGVVYFIQVCIWIYIWIDDNSVAELIGQIFIGAVSFIAAIGFLIYGGRLFSMLR 205
Y S+NGVVY IQ+CIWIY+ ++F+ +SF AA+GFL+YGGRLF +LR
Sbjct: 141 PAYFSINGVVYLIQICIWIYMTASKTVAGIEAAKLFLAVISFCAALGFLLYGGRLFFLLR 200
Query: 206 RFPIESKGRRKKLNEVGCVTAICFTCFLIRCLMVFISAFDSDASLDVLDHPILDFIYYML 265
RFPIES+GR+KKL EVG VT+IC TCFLIRC+++ ISAFD +A LDVL HP+L+ +YY+L
Sbjct: 201 RFPIESRGRQKKLYEVGSVTSICCTCFLIRCVLLAISAFDQEADLDVLSHPMLNLVYYLL 260
Query: 266 VEIVPSALVLFILRKLPPKRISAQYHPIR 294
VEIVPSALVLFILRKLPPKR+S QYHPIR
Sbjct: 261 VEIVPSALVLFILRKLPPKRVSDQYHPIR 289
>Medtr4g131930.2 | tobamovirus multiplication-like protein | HC |
chr4:55083666-55089675 | 20130731
Length = 215
Score = 338 bits (867), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 158/215 (73%), Positives = 181/215 (84%)
Query: 80 MNFIVSGVRALVFGFHTKVFTLHPKXXXXXXXXXXXXXYFSTYTLLVLFWAEIYHQARSL 139
MNFI++GVRALVFG HT +F HPK +FSTYTLLVLFWAEIYHQARSL
Sbjct: 1 MNFILNGVRALVFGLHTLLFLFHPKVFVLVLLDLPGLLFFSTYTLLVLFWAEIYHQARSL 60
Query: 140 PTDKLKIVYVSVNGVVYFIQVCIWIYIWIDDNSVAELIGQIFIGAVSFIAAIGFLIYGGR 199
PTD LKI+Y+S+N +Y IQ+CIWIY+W DDNSV E G+IFIG VSF+AA+GFL+YGGR
Sbjct: 61 PTDMLKIIYISINAALYIIQICIWIYLWTDDNSVVEFFGKIFIGGVSFVAALGFLLYGGR 120
Query: 200 LFSMLRRFPIESKGRRKKLNEVGCVTAICFTCFLIRCLMVFISAFDSDASLDVLDHPILD 259
LF MLR FPIESKGRRKKL+EVG +TAICFTCFLIRC+M F+SAFDSD SLDVLDHPILD
Sbjct: 121 LFCMLRHFPIESKGRRKKLHEVGSITAICFTCFLIRCVMGFLSAFDSDTSLDVLDHPILD 180
Query: 260 FIYYMLVEIVPSALVLFILRKLPPKRISAQYHPIR 294
+YYMLVE++PSALVL+ILRKLPP+RISAQYH I
Sbjct: 181 LVYYMLVEVLPSALVLYILRKLPPRRISAQYHAIH 215
>Medtr1g033830.1 | tobamovirus multiplication-like protein | HC |
chr1:12230012-12237108 | 20130731
Length = 297
Score = 330 bits (847), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 156/269 (57%), Positives = 201/269 (74%)
Query: 26 WWDHISDSTQWQSALFYSLCAAYALISSVALIQLIRIELRVPEYGWTTQKIFHLMNFIVS 85
WW+ I DS WQ +FY+L Y ++S++ALIQL+RI+LRVPEYGWTTQK+FH +NF+V+
Sbjct: 29 WWNDIDDSPLWQDRIFYTLAGLYGVVSAIALIQLVRIQLRVPEYGWTTQKVFHFLNFVVN 88
Query: 86 GVRALVFGFHTKVFTLHPKXXXXXXXXXXXXXYFSTYTLLVLFWAEIYHQARSLPTDKLK 145
VR LVF F V L P+ +F+TY LLVLFWAEIY+QAR++ TD LK
Sbjct: 89 AVRCLVFIFFRNVQRLQPEIAQHILLDVPSLAFFTTYALLVLFWAEIYYQARAVSTDGLK 148
Query: 146 IVYVSVNGVVYFIQVCIWIYIWIDDNSVAELIGQIFIGAVSFIAAIGFLIYGGRLFSMLR 205
+ +N VVY +Q+ +W+ +W SV ++ ++F VS AA+GFL+YGGRLF ML+
Sbjct: 149 PSFYIINVVVYAVQIILWLILWWKPVSVLVILSKVFFAGVSLFAALGFLLYGGRLFLMLQ 208
Query: 206 RFPIESKGRRKKLNEVGCVTAICFTCFLIRCLMVFISAFDSDASLDVLDHPILDFIYYML 265
RFP+ESKGRRKKL EVG VT ICF CFLIR +M+ +AFD +A+L+V+DHPIL+FIYY+L
Sbjct: 209 RFPVESKGRRKKLQEVGYVTTICFLCFLIRSVMMCFNAFDKNANLNVMDHPILNFIYYLL 268
Query: 266 VEIVPSALVLFILRKLPPKRISAQYHPIR 294
VEI+PS+LVLFILRKLPPKR QYHPIR
Sbjct: 269 VEILPSSLVLFILRKLPPKRGITQYHPIR 297
>Medtr2g022880.2 | tobamovirus multiplication-like protein | HC |
chr2:7962718-7966725 | 20130731
Length = 252
Score = 314 bits (804), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 154/208 (74%), Positives = 172/208 (82%), Gaps = 2/208 (0%)
Query: 32 DSTQWQSALFYSLCAAYALISSVALIQLIRIELRVPEYGWTTQKIFHLMNFIVSGVRALV 91
DST S LFY+LCA+++LIS +ALIQLIRIELRVPEYGWTTQKIFHL NFIVSGVRALV
Sbjct: 24 DSTH--SPLFYTLCASFSLISFIALIQLIRIELRVPEYGWTTQKIFHLFNFIVSGVRALV 81
Query: 92 FGFHTKVFTLHPKXXXXXXXXXXXXXYFSTYTLLVLFWAEIYHQARSLPTDKLKIVYVSV 151
FGFH +VF LHPK +FSTYTLLVLFWAEIYHQARSLPTDKL+I+Y+SV
Sbjct: 82 FGFHAQVFFLHPKVLTLVLLDLPGLVFFSTYTLLVLFWAEIYHQARSLPTDKLRIIYISV 141
Query: 152 NGVVYFIQVCIWIYIWIDDNSVAELIGQIFIGAVSFIAAIGFLIYGGRLFSMLRRFPIES 211
NG VY IQV WIY+W+D N V + IG+IFI VSF+AAIGFLI+GGRLF ML+RFPIES
Sbjct: 142 NGAVYLIQVGFWIYLWLDYNDVVDFIGKIFIAGVSFVAAIGFLIFGGRLFFMLKRFPIES 201
Query: 212 KGRRKKLNEVGCVTAICFTCFLIRCLMV 239
KGRRKKL EVG VT ICFTCFLIR +MV
Sbjct: 202 KGRRKKLQEVGFVTIICFTCFLIRSVMV 229
>Medtr1g033830.2 | tobamovirus multiplication-like protein | HC |
chr1:12230012-12236055 | 20130731
Length = 224
Score = 219 bits (559), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 103/195 (52%), Positives = 137/195 (70%)
Query: 26 WWDHISDSTQWQSALFYSLCAAYALISSVALIQLIRIELRVPEYGWTTQKIFHLMNFIVS 85
WW+ I DS WQ +FY+L Y ++S++ALIQL+RI+LRVPEYGWTTQK+FH +NF+V+
Sbjct: 29 WWNDIDDSPLWQDRIFYTLAGLYGVVSAIALIQLVRIQLRVPEYGWTTQKVFHFLNFVVN 88
Query: 86 GVRALVFGFHTKVFTLHPKXXXXXXXXXXXXXYFSTYTLLVLFWAEIYHQARSLPTDKLK 145
VR LVF F V L P+ +F+TY LLVLFWAEIY+QAR++ TD LK
Sbjct: 89 AVRCLVFIFFRNVQRLQPEIAQHILLDVPSLAFFTTYALLVLFWAEIYYQARAVSTDGLK 148
Query: 146 IVYVSVNGVVYFIQVCIWIYIWIDDNSVAELIGQIFIGAVSFIAAIGFLIYGGRLFSMLR 205
+ +N VVY +Q+ +W+ +W SV ++ ++F VS AA+GFL+YGGRLF ML+
Sbjct: 149 PSFYIINVVVYAVQIILWLILWWKPVSVLVILSKVFFAGVSLFAALGFLLYGGRLFLMLQ 208
Query: 206 RFPIESKGRRKKLNE 220
RFP+ESKGRRKKL E
Sbjct: 209 RFPVESKGRRKKLQE 223
>Medtr4g096650.2 | plant/F17J16-140 protein | HC |
chr4:38446874-38455721 | 20130731
Length = 348
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 129/296 (43%), Gaps = 58/296 (19%)
Query: 44 LCAAYALISSVALIQLIRIELRVPEYGWTTQKIFHLM----NFIVSGVRALVFGFHTKVF 99
L +A+++S+A IQ +RI LR + GWT QK+FHL+ N+ S AL+ K +
Sbjct: 21 LAIVHAILASIATIQSLRIHLRSLQLGWTRQKVFHLLIGSSNWGYSIYLALILLAACKGW 80
Query: 100 TLHPKXXXXXXXXXXXXXYFSTYTLLVLFWAEIYHQA----------------------- 136
T +F+ + LL+ FW ++ HQ
Sbjct: 81 TYWSHSCGFIFMALPKVLFFAAFLLLLSFWVDLCHQPDDDDDYEGSFSEEPLLGKTSNEL 140
Query: 137 ---------RSLPTDKLKIVY----VSVNGVVYFIQV---CIWIYIWIDDNSV-AELIGQ 179
+ P ++ Y V++ ++ FI + + I+I + N + +E+ +
Sbjct: 141 ILTNRDRHRKCFPIRFSRLGYRQKIVTLVMLLLFITIVAFAVIIWIGLGKNPIDSEVAAR 200
Query: 180 IFIGAVSFIAAIGFLIYGGRL-----FSMLRRFPIESKGRRKKLNEVGCVTAICFTCFL- 233
+++ I+AIG L+ GG L L+ + ++ ++ +V +T + CF
Sbjct: 201 VYLD----ISAIGMLLLGGALACYGILLCLKMSKVRAEKPSSEMGKVAGLTIVSVLCFTS 256
Query: 234 IRCLMVFIS---AFD-SDASLDVLDHPILDFIYYMLVEIVPSALVLFILRKLPPKR 285
C+ +F F ++ + +L +Y+ + +PSA+VL+++R+LPP
Sbjct: 257 SSCIELFTDIPMMFHWHQQRMNDVYASLLLILYFFVGSSIPSAVVLWVMRELPPAE 312
>Medtr4g096650.1 | plant/F17J16-140 protein | HC |
chr4:38446874-38455756 | 20130731
Length = 355
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 129/296 (43%), Gaps = 58/296 (19%)
Query: 44 LCAAYALISSVALIQLIRIELRVPEYGWTTQKIFHLM----NFIVSGVRALVFGFHTKVF 99
L +A+++S+A IQ +RI LR + GWT QK+FHL+ N+ S AL+ K +
Sbjct: 21 LAIVHAILASIATIQSLRIHLRSLQLGWTRQKVFHLLIGSSNWGYSIYLALILLAACKGW 80
Query: 100 TLHPKXXXXXXXXXXXXXYFSTYTLLVLFWAEIYHQA----------------------- 136
T +F+ + LL+ FW ++ HQ
Sbjct: 81 TYWSHSCGFIFMALPKVLFFAAFLLLLSFWVDLCHQPDDDDDYEGSFSEEPLLGKTSNEL 140
Query: 137 ---------RSLPTDKLKIVY----VSVNGVVYFIQV---CIWIYIWIDDNSV-AELIGQ 179
+ P ++ Y V++ ++ FI + + I+I + N + +E+ +
Sbjct: 141 ILTNRDRHRKCFPIRFSRLGYRQKIVTLVMLLLFITIVAFAVIIWIGLGKNPIDSEVAAR 200
Query: 180 IFIGAVSFIAAIGFLIYGGRL-----FSMLRRFPIESKGRRKKLNEVGCVTAICFTCFL- 233
+++ I+AIG L+ GG L L+ + ++ ++ +V +T + CF
Sbjct: 201 VYLD----ISAIGMLLLGGALACYGILLCLKMSKVRAEKPSSEMGKVAGLTIVSVLCFTS 256
Query: 234 IRCLMVFIS---AFD-SDASLDVLDHPILDFIYYMLVEIVPSALVLFILRKLPPKR 285
C+ +F F ++ + +L +Y+ + +PSA+VL+++R+LPP
Sbjct: 257 SSCIELFTDIPMMFHWHQQRMNDVYASLLLILYFFVGSSIPSAVVLWVMRELPPAE 312