Miyakogusa Predicted Gene

Lj6g3v1878830.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1878830.1 Non Characterized Hit- tr|I3STV7|I3STV7_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,98.7,0,SUBFAMILY NOT NAMED,NULL; DER1-LIKE PROTEIN, DERLIN,Derlin;
DER1,Derlin; seg,NULL; Rhomboid-like,NUL,CUFF.60024.1
         (231 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g022890.1 | derlin-2 protein | HC | chr2:7970627-7967348 |...   415   e-116
Medtr8g102300.2 | derlin-2 protein | HC | chr8:43043187-43047566...   133   1e-31
Medtr8g102300.1 | derlin-2 protein | HC | chr8:43043170-43047566...   133   2e-31
Medtr8g102300.3 | derlin-2 protein | HC | chr8:43043170-43046799...   132   2e-31
Medtr3g408340.1 | derlin-2 protein | HC | chr3:1436337-1432598 |...   123   2e-28

>Medtr2g022890.1 | derlin-2 protein | HC | chr2:7970627-7967348 |
           20130731
          Length = 244

 Score =  415 bits (1067), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 205/218 (94%), Positives = 206/218 (94%)

Query: 1   MAQAVEEWYKQMPVITRSYLTAAVVTTIGCSLDIISPYHLYLNPRLVVKQYQFWRLVTNF 60
           MAQAVEEWYKQMPVITRSYLTAAVVTTIGCSL+IISPYHLYLNPRLVVKQYQFWRLVTNF
Sbjct: 1   MAQAVEEWYKQMPVITRSYLTAAVVTTIGCSLEIISPYHLYLNPRLVVKQYQFWRLVTNF 60

Query: 61  LYFRKXXXXXXXXXXXXARYCKLLEENSFRGRTADFFYMLLFGASVLTGIVLLGGMIPYL 120
           LYFRK            ARYCKLLEENSFRGRTADFFYMLLFGASVLTGIVLLGGMIPYL
Sbjct: 61  LYFRKMDLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGASVLTGIVLLGGMIPYL 120

Query: 121 SESFAKIIFLSNSLTFMMVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVLVGASAW 180
           SESFAKIIFLSNSLTFMMVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVLVGASAW
Sbjct: 121 SESFAKIIFLSNSLTFMMVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVLVGASAW 180

Query: 181 VDLLGMIAGHAYYFLEDVYPRMTGRRPLKTPSLIKALF 218
           VDLLGMIAGHAYYFLEDVYPRMTGRRPLKTPSLIKALF
Sbjct: 181 VDLLGMIAGHAYYFLEDVYPRMTGRRPLKTPSLIKALF 218


>Medtr8g102300.2 | derlin-2 protein | HC | chr8:43043187-43047566 |
           20130731
          Length = 204

 Score =  133 bits (334), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 79/205 (38%), Positives = 111/205 (54%), Gaps = 9/205 (4%)

Query: 7   EWYKQMPVITRSYLTAAVVTTIGCSLDIISPYHLYLNPRLVVKQYQFWRLVTNFLYFRKX 66
           E+YK +P I+++Y TA +V T    L + +P H+ L    V  ++Q WRL TNF +    
Sbjct: 6   EFYKSLPPISKAYGTACLVATAVYQLGLYNPVHIALLYERVFFRFQVWRLFTNFFFLGPF 65

Query: 67  XXXXXXXXXXXARYCKLLEENSFRGRTADFFYMLLFGASVLTGIVLLGGMIPYLSESFAK 126
                       RY   LE+  F  RTADF +M++FGA  L    L+   IP+    F  
Sbjct: 66  SINFGIRLLMIVRYGVQLEKGPFDRRTADFLWMMIFGAFAL----LVLSAIPFFWTPFLA 121

Query: 127 IIFLSNSLTFMMVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVLVGASAWVDLLGM 186
           I     SL FM++YVWS++ P   ++  GL    A YLPW +L   V+ G++   DLLG+
Sbjct: 122 I-----SLVFMLLYVWSREFPNAQINLYGLVALKAFYLPWAMLALDVIFGSALMPDLLGI 176

Query: 187 IAGHAYYFLEDVYPRMTGRRPLKTP 211
           IAGH YYFL  ++P   G+  LKTP
Sbjct: 177 IAGHLYYFLTVLHPLAGGKNILKTP 201


>Medtr8g102300.1 | derlin-2 protein | HC | chr8:43043170-43047566 |
           20130731
          Length = 245

 Score =  133 bits (334), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 80/211 (37%), Positives = 113/211 (53%), Gaps = 9/211 (4%)

Query: 7   EWYKQMPVITRSYLTAAVVTTIGCSLDIISPYHLYLNPRLVVKQYQFWRLVTNFLYFRKX 66
           E+YK +P I+++Y TA +V T    L + +P H+ L    V  ++Q WRL TNF +    
Sbjct: 6   EFYKSLPPISKAYGTACLVATAVYQLGLYNPVHIALLYERVFFRFQVWRLFTNFFFLGPF 65

Query: 67  XXXXXXXXXXXARYCKLLEENSFRGRTADFFYMLLFGASVLTGIVLLGGMIPYLSESFAK 126
                       RY   LE+  F  RTADF +M++FGA  L    L+   IP+    F  
Sbjct: 66  SINFGIRLLMIVRYGVQLEKGPFDRRTADFLWMMIFGAFAL----LVLSAIPFFWTPFLA 121

Query: 127 IIFLSNSLTFMMVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVLVGASAWVDLLGM 186
           I     SL FM++YVWS++ P   ++  GL    A YLPW +L   V+ G++   DLLG+
Sbjct: 122 I-----SLVFMLLYVWSREFPNAQINLYGLVALKAFYLPWAMLALDVIFGSALMPDLLGI 176

Query: 187 IAGHAYYFLEDVYPRMTGRRPLKTPSLIKAL 217
           IAGH YYFL  ++P   G+  LKTP  +  L
Sbjct: 177 IAGHLYYFLTVLHPLAGGKNILKTPMWVHKL 207


>Medtr8g102300.3 | derlin-2 protein | HC | chr8:43043170-43046799 |
           20130731
          Length = 233

 Score =  132 bits (333), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 79/205 (38%), Positives = 112/205 (54%), Gaps = 9/205 (4%)

Query: 7   EWYKQMPVITRSYLTAAVVTTIGCSLDIISPYHLYLNPRLVVKQYQFWRLVTNFLYFRKX 66
           E+YK +P I+++Y TA +V T    L + +P H+ L    V  ++Q WRL TNF +    
Sbjct: 6   EFYKSLPPISKAYGTACLVATAVYQLGLYNPVHIALLYERVFFRFQVWRLFTNFFFLGPF 65

Query: 67  XXXXXXXXXXXARYCKLLEENSFRGRTADFFYMLLFGASVLTGIVLLGGMIPYLSESFAK 126
                       RY   LE+  F  RTADF +M++FGA  L    L+   IP+    F  
Sbjct: 66  SINFGIRLLMIVRYGVQLEKGPFDRRTADFLWMMIFGAFAL----LVLSAIPFFWTPF-- 119

Query: 127 IIFLSNSLTFMMVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVLVGASAWVDLLGM 186
              L+ SL FM++YVWS++ P   ++  GL    A YLPW +L   V+ G++   DLLG+
Sbjct: 120 ---LAISLVFMLLYVWSREFPNAQINLYGLVALKAFYLPWAMLALDVIFGSALMPDLLGI 176

Query: 187 IAGHAYYFLEDVYPRMTGRRPLKTP 211
           IAGH YYFL  ++P   G+  LKTP
Sbjct: 177 IAGHLYYFLTVLHPLAGGKNILKTP 201


>Medtr3g408340.1 | derlin-2 protein | HC | chr3:1436337-1432598 |
           20130731
          Length = 280

 Score =  123 bits (308), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 74/211 (35%), Positives = 111/211 (52%), Gaps = 9/211 (4%)

Query: 7   EWYKQMPVITRSYLTAAVVTTIGCSLDIISPYHLYLNPRLVVKQYQFWRLVTNFLYFRKX 66
           E++  +P +++++  A  +TT    L++     + L   LV K+ Q WRL+TNF +    
Sbjct: 6   EYFWSLPPVSKTFGVACFMTTAAYYLNLYDAESIALFYGLVFKRLQVWRLITNFFFLGPF 65

Query: 67  XXXXXXXXXXXARYCKLLEENSFRGRTADFFYMLLFGASVLTGIVLLGGMIPYLSESFAK 126
                      A+Y   LE   F  RTADF +ML+FGA  L    L+  ++PYL   F  
Sbjct: 66  SFPFAVRLIMIAKYGVSLERGPFDKRTADFVWMLIFGALSL----LVMAVVPYLWSPFMG 121

Query: 127 IIFLSNSLTFMMVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVLVGASAWVDLLGM 186
           I     SL FM+VYVWS++ P   ++  GL +    YLPW +LG  ++ G     D+LGM
Sbjct: 122 I-----SLVFMIVYVWSREFPDARINIYGLVSLKGFYLPWAMLGLDLIFGNPLKPDILGM 176

Query: 187 IAGHAYYFLEDVYPRMTGRRPLKTPSLIKAL 217
           +AGH YYFL  ++P   G+    TP L+  +
Sbjct: 177 VAGHLYYFLTVLHPLAGGKFKFNTPLLVHKI 207